RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 ABCC5O15440 1437 aa1.99□□□□□ -2.09
HMGB1P38-201ENST00000490557 SCAPERQ9BY12 1400 aa1.99□□□□□ -2.09
HMGB1P38-201ENST00000490557 LAMB4A4D0S4 1761 aa1.98□□□□□ -2.09
HMGB1P38-201ENST00000490557 ADGRB3O60242 1522 aa1.98□□□□□ -2.09
HMGB1P38-201ENST00000490557 TRAV12-3A0A0B4J271 114 aa1.98□□□□□ -2.09
HMGB1P38-201ENST00000490557 TRBV6-4A0A1B0GX49 114 aa1.98□□□□□ -2.09
HMGB1P38-201ENST00000490557 hADV29S1A0JD25 119 aa1.98□□□□□ -2.09
HMGB1P38-201ENST00000490557 NAP1L6A6NFF2 107 aa1.98□□□□□ -2.09
HMGB1P38-201ENST00000490557 HCG22E2RYF7 251 aa1.98□□□□□ -2.09
HMGB1P38-201ENST00000490557 H3BQF6 201 aa1.98□□□□□ -2.09
HMGB1P38-201ENST00000490557 GYPAP02724 150 aa1.98□□□□□ -2.09
HMGB1P38-201ENST00000490557 C10orf82Q8WW14 230 aa1.98□□□□□ -2.09
HMGB1P38-201ENST00000490557 IFI27L1Q96BM0 104 aa1.98□□□□□ -2.09
HMGB1P38-201ENST00000490557 CYP4F30PQ9H0H9 118 aa1.98□□□□□ -2.09
HMGB1P38-201ENST00000490557 NPVFQ9HCQ7 196 aa1.98□□□□□ -2.09
HMGB1P38-201ENST00000490557 NINQ8N4C6 2090 aa1.98□□□□□ -2.09
HMGB1P38-201ENST00000490557 CASKIN1Q8WXD9 1431 aa1.98□□□□□ -2.09
HMGB1P38-201ENST00000490557 LRP5O75197 1615 aa1.98□□□□□ -2.09
HMGB1P38-201ENST00000490557 COL11A1P12107 1806 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P38-201ENST00000490557 PLEKHH2Q8IVE3 1493 aa1.97□□□□□ -2.09
HMGB1P38-201ENST00000490557 UQCRHLA0A096LP55 91 aa1.97□□□□□ -2.09
HMGB1P38-201ENST00000490557 A0A0J9YY99 117 aa1.97□□□□□ -2.09
HMGB1P38-201ENST00000490557 NUPR2A6NF83 97 aa1.97□□□□□ -2.09
HMGB1P38-201ENST00000490557 PPYP01298 95 aa1.97□□□□□ -2.09
HMGB1P38-201ENST00000490557 UQCRHP07919 91 aa1.97□□□□□ -2.09
HMGB1P38-201ENST00000490557 CCL8P80075 99 aa1.97□□□□□ -2.09
HMGB1P38-201ENST00000490557 PEA15Q15121 130 aa1.97□□□□□ -2.09
HMGB1P38-201ENST00000490557 C10orf55Q5SWW7 151 aa1.97□□□□□ -2.09
HMGB1P38-201ENST00000490557 MGST2Q99735 147 aa1.97□□□□□ -2.09
HMGB1P38-201ENST00000490557 TXNDC17Q9BRA2 123 aa1.97□□□□□ -2.09
HMGB1P38-201ENST00000490557 LIMD2Q9BT23 127 aa1.97□□□□□ -2.09
HMGB1P38-201ENST00000490557 CDC42SE1Q9NRR8 79 aa1.97□□□□□ -2.09
HMGB1P38-201ENST00000490557 CASZ1Q86V15 1759 aa1.97□□□□□ -2.09
HMGB1P38-201ENST00000490557 KIAA1551Q9HCM1 1747 aa1.97□□□□□ -2.09
HMGB1P38-201ENST00000490557 ANKRD26Q9UPS8 1709 aa1.97□□□□□ -2.09
HMGB1P38-201ENST00000490557 RTTNQ86VV8 2226 aa1.97□□□□□ -2.09
HMGB1P38-201ENST00000490557 DISP1Q96F81 1524 aa1.96□□□□□ -2.09
HMGB1P38-201ENST00000490557 HEATR1Q9H583 2144 aaKnown RBP1.96□□□□□ -2.1
HMGB1P38-201ENST00000490557 CRYM-AS1A6NIL9 109 aa1.96□□□□□ -2.1
HMGB1P38-201ENST00000490557 ATOX1O00244 68 aa1.96□□□□□ -2.1
HMGB1P38-201ENST00000490557 NUPR1O60356 82 aa1.96□□□□□ -2.1
HMGB1P38-201ENST00000490557 FAUP35544 74 aaKnown RBP1.96□□□□□ -2.1
HMGB1P38-201ENST00000490557 SEC11AP67812 179 aa1.96□□□□□ -2.1
HMGB1P38-201ENST00000490557 MPV17LQ2QL34 196 aa1.96□□□□□ -2.1
HMGB1P38-201ENST00000490557 REG4Q9BYZ8 158 aa1.96□□□□□ -2.1
HMGB1P38-201ENST00000490557 LINC00474Q9P2X8 69 aa1.96□□□□□ -2.1
HMGB1P38-201ENST00000490557 ANKRD36BQ8N2N9 1353 aa1.96□□□□□ -2.1
HMGB1P38-201ENST00000490557 MYOFQ9NZM1 2061 aa1.95□□□□□ -2.1
HMGB1P38-201ENST00000490557 PTPRMP28827 1452 aa1.95□□□□□ -2.1
HMGB1P38-201ENST00000490557 TRAV23DV6A0A075B6W5 121 aa1.95□□□□□ -2.1
HMGB1P38-201ENST00000490557 JMJD7-PLA2G4BH0Y9G9 81 aa1.95□□□□□ -2.1
HMGB1P38-201ENST00000490557 K7EP34 96 aa1.95□□□□□ -2.1
HMGB1P38-201ENST00000490557 SNRNP200O75643 2136 aaKnown RBP1.95□□□□□ -2.1
HMGB1P38-201ENST00000490557 SIX6O95475 246 aa1.95□□□□□ -2.1
HMGB1P38-201ENST00000490557 C6orf52Q5T4I8 152 aa1.95□□□□□ -2.1
HMGB1P38-201ENST00000490557 COA5Q86WW8 74 aa1.95□□□□□ -2.1
HMGB1P38-201ENST00000490557 ROBO1Q9Y6N7 1651 aa1.95□□□□□ -2.1
HMGB1P38-201ENST00000490557 BRWD1Q9NSI6 2320 aa1.95□□□□□ -2.1
HMGB1P38-201ENST00000490557 ZFHX2Q9C0A1 2572 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P38-201ENST00000490557 MED12LQ86YW9 2145 aa1.94□□□□□ -2.1
HMGB1P38-201ENST00000490557 EML5Q05BV3 1969 aa1.94□□□□□ -2.1
HMGB1P38-201ENST00000490557 MPDZO75970 2070 aa1.94□□□□□ -2.1
HMGB1P38-201ENST00000490557 DNAL4O96015 105 aa1.94□□□□□ -2.1
HMGB1P38-201ENST00000490557 CYB5AP00167 134 aa1.94□□□□□ -2.1
HMGB1P38-201ENST00000490557 IGHV3-30P01768 117 aa1.94□□□□□ -2.1
HMGB1P38-201ENST00000490557 IGHV3-30-5P0DP03 117 aa1.94□□□□□ -2.1
HMGB1P38-201ENST00000490557 RNASE3P12724 160 aaKnown RBP1.94□□□□□ -2.1
HMGB1P38-201ENST00000490557 ZNF818PQ6ZRF7 136 aa1.94□□□□□ -2.1
HMGB1P38-201ENST00000490557 CYP2G1PQ6ZSU1 146 aa1.94□□□□□ -2.1
HMGB1P38-201ENST00000490557 TSLPQ969D9 159 aa1.94□□□□□ -2.1
HMGB1P38-201ENST00000490557 ODF3Q96PU9 254 aa1.94□□□□□ -2.1
HMGB1P38-201ENST00000490557 TMEM14CQ9P0S9 112 aa1.94□□□□□ -2.1
HMGB1P38-201ENST00000490557 DCAF1Q9Y4B6 1507 aa1.94□□□□□ -2.1
HMGB1P38-201ENST00000490557 TRPM7Q96QT4 1865 aa1.94□□□□□ -2.1
HMGB1P38-201ENST00000490557 CC2D2AQ9P2K1 1620 aa1.94□□□□□ -2.1
HMGB1P38-201ENST00000490557 GOLGA3Q08378 1498 aa1.94□□□□□ -2.1
HMGB1P38-201ENST00000490557 KIAA1549LQ6ZVL6 1849 aa1.94□□□□□ -2.1
HMGB1P38-201ENST00000490557 PHIPQ8WWQ0 1821 aa1.94□□□□□ -2.1
HMGB1P38-201ENST00000490557 UACAQ9BZF9 1416 aa1.93□□□□□ -2.1
HMGB1P38-201ENST00000490557 LAMB2P55268 1798 aa1.93□□□□□ -2.1
HMGB1P38-201ENST00000490557 UNC13CQ8NB66 2214 aa1.93□□□□□ -2.1
HMGB1P38-201ENST00000490557 IGKV3-7A0A075B6H7 116 aa1.93□□□□□ -2.1
HMGB1P38-201ENST00000490557 IGLV3-32A0A0A0MS00 114 aa1.93□□□□□ -2.1
HMGB1P38-201ENST00000490557 TRBV7-1A0A0A6YYK4 115 aa1.93□□□□□ -2.1
HMGB1P38-201ENST00000490557 TRBV6-5A0A0K0K1A5 114 aa1.93□□□□□ -2.1
HMGB1P38-201ENST00000490557 HIGD1CA8MV81 97 aa1.93□□□□□ -2.1
HMGB1P38-201ENST00000490557 NDUFC1O43677 76 aa1.93□□□□□ -2.1
HMGB1P38-201ENST00000490557 SFT2D2O95562 160 aa1.93□□□□□ -2.1
HMGB1P38-201ENST00000490557 C10orf128Q5T292 105 aa1.93□□□□□ -2.1
HMGB1P38-201ENST00000490557 FAM213BQ8TBF2 198 aa1.93□□□□□ -2.1
HMGB1P38-201ENST00000490557 S100A13Q99584 98 aa1.93□□□□□ -2.1
HMGB1P38-201ENST00000490557 WFDC10AQ9H1F0 79 aa1.93□□□□□ -2.1
HMGB1P38-201ENST00000490557 CDK12Q9NYV4 1490 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P38-201ENST00000490557 ANK1P16157 1881 aa1.92□□□□□ -2.1
HMGB1P38-201ENST00000490557 RRBP1Q9P2E9 1410 aaKnown RBP1.92□□□□□ -2.1
HMGB1P38-201ENST00000490557 TRBV7-7A0A0K0K1E9 115 aa1.92□□□□□ -2.1
HMGB1P38-201ENST00000490557 PDE6GP18545 87 aa1.92□□□□□ -2.1
HMGB1P38-201ENST00000490557 S100A16Q96FQ6 103 aaKnown RBP1.92□□□□□ -2.1
HMGB1P38-201ENST00000490557 MANBALQ9NQG1 85 aa1.92□□□□□ -2.1
HMGB1P38-201ENST00000490557 SPAG17Q6Q759 2223 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms