RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 CDK2AP2O75956 126 aa7.22□□□□□ -1.25
TTC28-207ENST00000490475 ANXA2RQ3ZCQ2 193 aa7.22□□□□□ -1.25
TTC28-207ENST00000490475 CST9LP1Q5W188 147 aa7.22□□□□□ -1.25
TTC28-207ENST00000490475 C11orf72Q8NBR9 251 aa7.22□□□□□ -1.25
TTC28-207ENST00000490475 OR10G8Q8NGN5 311 aa7.22□□□□□ -1.25
TTC28-207ENST00000490475 C18orf15Q96N68 181 aa7.22□□□□□ -1.25
TTC28-207ENST00000490475 C8orf49Q96NF6 230 aa7.22□□□□□ -1.25
TTC28-207ENST00000490475 KLF12Q9Y4X4 402 aa7.22□□□□□ -1.25
TTC28-207ENST00000490475 TRAPPC1Q9Y5R8 145 aa7.22□□□□□ -1.25
TTC28-207ENST00000490475 PCLOQ9Y6V0 5065 aa7.22□□□□□ -1.25
TTC28-207ENST00000490475 TRAV26-1A0A087WT03 109 aa7.21□□□□□ -1.26
TTC28-207ENST00000490475 PEX7O00628 323 aa7.21□□□□□ -1.26
TTC28-207ENST00000490475 GNRH2O43555 120 aa7.21□□□□□ -1.26
TTC28-207ENST00000490475 ZNF80P51504 273 aaPredicted RBP7.21□□□□□ -1.26
TTC28-207ENST00000490475 Q0VG73 95 aa7.21□□□□□ -1.26
TTC28-207ENST00000490475 SLAQ13239 276 aa7.21□□□□□ -1.26
TTC28-207ENST00000490475 Q6AWC8 147 aa7.21□□□□□ -1.26
TTC28-207ENST00000490475 WDR73Q6P4I2 378 aa7.21□□□□□ -1.26
TTC28-207ENST00000490475 RASL11AQ6T310 242 aa7.21□□□□□ -1.26
TTC28-207ENST00000490475 TMEM75Q8N9X5 138 aa7.21□□□□□ -1.26
TTC28-207ENST00000490475 IL36BQ9NZH7 164 aa7.21□□□□□ -1.26
TTC28-207ENST00000490475 MDFICQ9P1T7 246 aa7.21□□□□□ -1.26
TTC28-207ENST00000490475 TRGV2A0A075B6R0 118 aa7.2□□□□□ -1.26
TTC28-207ENST00000490475 GAGE12BA1L429 117 aa7.2□□□□□ -1.26
TTC28-207ENST00000490475 GAGE7O76087 117 aa7.2□□□□□ -1.26
TTC28-207ENST00000490475 GAGE12FP0CL80 117 aa7.2□□□□□ -1.26
TTC28-207ENST00000490475 GAGE12GP0CL81 117 aa7.2□□□□□ -1.26
TTC28-207ENST00000490475 GAGE12IP0CL82 117 aa7.2□□□□□ -1.26
TTC28-207ENST00000490475 ERVFC1-1P60608 527 aa7.2□□□□□ -1.26
TTC28-207ENST00000490475 TNP2Q05952 138 aa7.2□□□□□ -1.26
TTC28-207ENST00000490475 COTL1Q14019 142 aa7.2□□□□□ -1.26
TTC28-207ENST00000490475 FAM159AQ6UWV7 190 aa7.2□□□□□ -1.26
TTC28-207ENST00000490475 Q6ZTI0 123 aa7.2□□□□□ -1.26
TTC28-207ENST00000490475 ZNF575Q86XF7 245 aa7.2□□□□□ -1.26
TTC28-207ENST00000490475 NDFIP1Q9BT67 221 aa7.2□□□□□ -1.26
TTC28-207ENST00000490475 GNB1LQ9BYB4 327 aa7.2□□□□□ -1.26
TTC28-207ENST00000490475 NAGKQ9UJ70 344 aa7.2□□□□□ -1.26
TTC28-207ENST00000490475 MRPS16Q9Y3D3 137 aaKnown RBP7.2□□□□□ -1.26
TTC28-207ENST00000490475 TRAV21A0A0B4J279 112 aa7.19□□□□□ -1.26
TTC28-207ENST00000490475 TMEM183BQ1AE95 376 aa7.19□□□□□ -1.26
TTC28-207ENST00000490475 PDZD11Q5EBL8 140 aa7.19□□□□□ -1.26
TTC28-207ENST00000490475 SAPCD1Q5SSQ6 148 aa7.19□□□□□ -1.26
TTC28-207ENST00000490475 IBA57Q5T440 356 aaKnown RBP7.19□□□□□ -1.26
TTC28-207ENST00000490475 ZNF664Q8N3J9 261 aa7.19□□□□□ -1.26
TTC28-207ENST00000490475 SMIM12Q96EX1 92 aa7.19□□□□□ -1.26
TTC28-207ENST00000490475 OSTCQ9NRP0 149 aa7.19□□□□□ -1.26
TTC28-207ENST00000490475 C11orf21Q9P2W6 132 aa7.19□□□□□ -1.26
TTC28-207ENST00000490475 FAT2Q9NYQ8 4349 aa7.18□□□□□ -1.26
TTC28-207ENST00000490475 TRGV1A0A0A0MS02 117 aa7.18□□□□□ -1.26
TTC28-207ENST00000490475 FBLL1A6NHQ2 334 aaKnown RBP7.18□□□□□ -1.26
TTC28-207ENST00000490475 SPINK4O60575 86 aa7.18□□□□□ -1.26
TTC28-207ENST00000490475 TCL1AP56279 114 aa7.18□□□□□ -1.26
TTC28-207ENST00000490475 OR10J3Q5JRS4 329 aa7.18□□□□□ -1.26
TTC28-207ENST00000490475 DNAH17Q9UFH2 4485 aa7.17□□□□□ -1.26
TTC28-207ENST00000490475 DNAH2Q9P225 4427 aa7.17□□□□□ -1.26
TTC28-207ENST00000490475 A0A0J9YY99 117 aa7.17□□□□□ -1.26
TTC28-207ENST00000490475 K7EP13 123 aa7.17□□□□□ -1.26
TTC28-207ENST00000490475 M0R143 59 aa7.17□□□□□ -1.26
TTC28-207ENST00000490475 PCP4P48539 62 aa7.17□□□□□ -1.26
TTC28-207ENST00000490475 CRIP1P50238 77 aa7.17□□□□□ -1.26
TTC28-207ENST00000490475 TDRG1Q3Y452 100 aa7.17□□□□□ -1.26
TTC28-207ENST00000490475 DMRTA1Q5VZB9 504 aa7.17□□□□□ -1.26
TTC28-207ENST00000490475 MRPL16Q9NX20 251 aaKnown RBP7.17□□□□□ -1.26
TTC28-207ENST00000490475 TRGV11A0A075B6L2 103 aa7.16□□□□□ -1.26
TTC28-207ENST00000490475 IGHV3-16A0A0C4DH30 117 aa7.16□□□□□ -1.26
TTC28-207ENST00000490475 SCO2A0A1W2PP80 73 aa7.16□□□□□ -1.26
TTC28-207ENST00000490475 EREGO14944 169 aa7.16□□□□□ -1.26
TTC28-207ENST00000490475 HLA-DQA1P01909 254 aa7.16□□□□□ -1.26
TTC28-207ENST00000490475 UBE2G1P62253 170 aa7.16□□□□□ -1.26
TTC28-207ENST00000490475 ZNF415Q09FC8 603 aa7.16□□□□□ -1.26
TTC28-207ENST00000490475 ESRGQ1W209 222 aa7.16□□□□□ -1.26
TTC28-207ENST00000490475 CDPF1Q6NVV7 123 aa7.16□□□□□ -1.26
TTC28-207ENST00000490475 Q86TA4 180 aa7.16□□□□□ -1.26
TTC28-207ENST00000490475 OCC1Q8TAD7 63 aa7.16□□□□□ -1.26
TTC28-207ENST00000490475 ZC2HC1AQ96GY0 325 aa7.16□□□□□ -1.26
TTC28-207ENST00000490475 FMC1Q96HJ9 113 aa7.16□□□□□ -1.26
TTC28-207ENST00000490475 PRO0255Q9UI72 69 aa7.16□□□□□ -1.26
TTC28-207ENST00000490475 ZFP30Q9Y2G7 519 aa7.16□□□□□ -1.26
TTC28-207ENST00000490475 ICOSQ9Y6W8 199 aa7.16□□□□□ -1.26
TTC28-207ENST00000490475 TRBV20OR9-2A0A075B6H5 130 aa7.15□□□□□ -1.26
TTC28-207ENST00000490475 TRAV9-2A0A087WT02 112 aa7.15□□□□□ -1.26
TTC28-207ENST00000490475 A0A096LPF7 62 aa7.15□□□□□ -1.26
TTC28-207ENST00000490475 FABP5P3A8MUU1 101 aa7.15□□□□□ -1.26
TTC28-207ENST00000490475 SIVA1O15304 175 aa7.15□□□□□ -1.26
TTC28-207ENST00000490475 PAX4O43316 350 aa7.15□□□□□ -1.26
TTC28-207ENST00000490475 LTAP01374 205 aa7.15□□□□□ -1.26
TTC28-207ENST00000490475 IGHV3-53P01767 116 aa7.15□□□□□ -1.26
TTC28-207ENST00000490475 GNG4P50150 75 aa7.15□□□□□ -1.26
TTC28-207ENST00000490475 FAM162BQ5T6X4 162 aa7.15□□□□□ -1.26
TTC28-207ENST00000490475 TEX43Q6ZNM6 134 aa7.15□□□□□ -1.26
TTC28-207ENST00000490475 FAM231DQ6ZW35 169 aa7.15□□□□□ -1.26
TTC28-207ENST00000490475 NFE4Q86UQ8 179 aa7.15□□□□□ -1.26
TTC28-207ENST00000490475 NHLRC2Q8NBF2 726 aa7.15□□□□□ -1.26
TTC28-207ENST00000490475 KCNS1Q96KK3 526 aa7.15□□□□□ -1.26
TTC28-207ENST00000490475 SPXQ9BT56 116 aa7.15□□□□□ -1.26
TTC28-207ENST00000490475 PKD1P98161 4303 aa7.14□□□□□ -1.27
TTC28-207ENST00000490475 IGKV3D-20A0A0C4DH25 116 aa7.14□□□□□ -1.27
TTC28-207ENST00000490475 TRBV6-1A0A0K0K1D8 114 aa7.14□□□□□ -1.27
TTC28-207ENST00000490475 SCGB1D1O95968 90 aa7.14□□□□□ -1.27
TTC28-207ENST00000490475 MRPL23Q16540 153 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms