RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 JPT2Q9H910 190 aa12.14□□□□□ -0.47
ERCC3-207ENST00000490062 A0A0J9YY99 117 aa12.13□□□□□ -0.47
ERCC3-207ENST00000490062 ADIRFQ15847 76 aa12.13□□□□□ -0.47
ERCC3-207ENST00000490062 RNF212Q495C1 297 aa12.13□□□□□ -0.47
ERCC3-207ENST00000490062 LYZL1Q6UWQ5 148 aa12.13□□□□□ -0.47
ERCC3-207ENST00000490062 SAMD10Q9BYL1 202 aa12.13□□□□□ -0.47
ERCC3-207ENST00000490062 RYR2Q92736 4967 aa12.13□□□□□ -0.47
ERCC3-207ENST00000490062 A0A096LPF7 62 aa12.12□□□□□ -0.47
ERCC3-207ENST00000490062 TMEM218A2RU14 115 aa12.12□□□□□ -0.47
ERCC3-207ENST00000490062 OR10G8Q8NGN5 311 aa12.12□□□□□ -0.47
ERCC3-207ENST00000490062 ICOSQ9Y6W8 199 aa12.12□□□□□ -0.47
ERCC3-207ENST00000490062 KIF25-AS1Q9Y6Z4 181 aa12.12□□□□□ -0.47
ERCC3-207ENST00000490062 FAM3BP58499 235 aaPredicted RBP12.11□□□□□ -0.47
ERCC3-207ENST00000490062 RHOHQ15669 191 aa12.11□□□□□ -0.47
ERCC3-207ENST00000490062 MRPL23Q16540 153 aaKnown RBP12.11□□□□□ -0.47
ERCC3-207ENST00000490062 COMMD7Q86VX2 200 aa12.11□□□□□ -0.47
ERCC3-207ENST00000490062 SLC25A29Q8N8R3 303 aa12.11□□□□□ -0.47
ERCC3-207ENST00000490062 AP1S3Q96PC3 154 aa12.11□□□□□ -0.47
ERCC3-207ENST00000490062 NUDT3O95989 172 aa12.1□□□□□ -0.47
ERCC3-207ENST00000490062 SH2D6Q7Z4S9 175 aa12.1□□□□□ -0.47
ERCC3-207ENST00000490062 K7EQD1 137 aa12.09□□□□□ -0.47
ERCC3-207ENST00000490062 TRGC1P0CF51 173 aa12.09□□□□□ -0.47
ERCC3-207ENST00000490062 ADCYAP1P18509 176 aa12.09□□□□□ -0.47
ERCC3-207ENST00000490062 NTF3P20783 257 aa12.09□□□□□ -0.47
ERCC3-207ENST00000490062 LINC00315P59091 139 aa12.09□□□□□ -0.47
ERCC3-207ENST00000490062 Q6ZSN1 163 aa12.09□□□□□ -0.47
ERCC3-207ENST00000490062 PRADC1Q9BSG0 188 aa12.09□□□□□ -0.47
ERCC3-207ENST00000490062 TPPP3Q9BW30 176 aa12.09□□□□□ -0.47
ERCC3-207ENST00000490062 SEC11CQ9BY50 192 aa12.09□□□□□ -0.47
ERCC3-207ENST00000490062 A0A087WWL8 130 aa12.08□□□□□ -0.48
ERCC3-207ENST00000490062 IGHV3-73A0A0B4J1V6 119 aa12.08□□□□□ -0.48
ERCC3-207ENST00000490062 MUC21A0A0G2JKD1 596 aa12.08□□□□□ -0.48
ERCC3-207ENST00000490062 MUC21A0A140T8X8 626 aa12.08□□□□□ -0.48
ERCC3-207ENST00000490062 SMIM27A0A1W2PRY6 76 aa12.08□□□□□ -0.48
ERCC3-207ENST00000490062 LINC00694P0DN24 101 aa12.08□□□□□ -0.48
ERCC3-207ENST00000490062 GYPEP15421 78 aa12.08□□□□□ -0.48
ERCC3-207ENST00000490062 RAB4BP61018 213 aa12.08□□□□□ -0.48
ERCC3-207ENST00000490062 MSRB1Q9NZV6 116 aa12.08□□□□□ -0.48
ERCC3-207ENST00000490062 HYDINQ4G0P3 5121 aa12.07□□□□□ -0.48
ERCC3-207ENST00000490062 TRBV10-1A0A0K0K1A3 114 aa12.07□□□□□ -0.48
ERCC3-207ENST00000490062 HIGD1CA8MV81 97 aa12.07□□□□□ -0.48
ERCC3-207ENST00000490062 PPP1R2P9O14990 202 aa12.07□□□□□ -0.48
ERCC3-207ENST00000490062 LY6G6CO95867 125 aa12.07□□□□□ -0.48
ERCC3-207ENST00000490062 CCL18P55774 89 aa12.07□□□□□ -0.48
ERCC3-207ENST00000490062 TIRAPP58753 221 aa12.07□□□□□ -0.48
ERCC3-207ENST00000490062 C10orf91Q5T1B1 145 aa12.07□□□□□ -0.48
ERCC3-207ENST00000490062 FAM74A4Q5TZK3 123 aa12.07□□□□□ -0.48
ERCC3-207ENST00000490062 NEGR1Q7Z3B1 354 aa12.07□□□□□ -0.48
ERCC3-207ENST00000490062 DNAH6Q9C0G6 4158 aa12.07□□□□□ -0.48
ERCC3-207ENST00000490062 RYR3Q15413 4870 aa12.06□□□□□ -0.48
ERCC3-207ENST00000490062 C14orf178Q8N769 122 aaPredicted RBP12.06□□□□□ -0.48
ERCC3-207ENST00000490062 UPK3BQ9BT76 320 aa12.06□□□□□ -0.48
ERCC3-207ENST00000490062 F8W036 122 aa12.05□□□□□ -0.48
ERCC3-207ENST00000490062 SRIP30626 198 aa12.05□□□□□ -0.48
ERCC3-207ENST00000490062 ESRGQ1W209 222 aa12.05□□□□□ -0.48
ERCC3-207ENST00000490062 ANAPC16Q96DE5 110 aa12.05□□□□□ -0.48
ERCC3-207ENST00000490062 PGLYRP4Q96LB8 373 aa12.05□□□□□ -0.48
ERCC3-207ENST00000490062 NAT8BQ9UHF3 227 aa12.05□□□□□ -0.48
ERCC3-207ENST00000490062 LINC00588Q9Y4M8 146 aa12.05□□□□□ -0.48
ERCC3-207ENST00000490062 LOC100131303A0A0U1RQF7 123 aa12.04□□□□□ -0.48
ERCC3-207ENST00000490062 A0A1B0GUT8 65 aa12.04□□□□□ -0.48
ERCC3-207ENST00000490062 SMIM17P0DL12 118 aa12.04□□□□□ -0.48
ERCC3-207ENST00000490062 EVI2AP22794 236 aa12.04□□□□□ -0.48
ERCC3-207ENST00000490062 NUP35Q8NFH5 326 aa12.04□□□□□ -0.48
ERCC3-207ENST00000490062 DPH3P1Q9H4G8 78 aa12.04□□□□□ -0.48
ERCC3-207ENST00000490062 CARHSP1Q9Y2V2 147 aaKnown RBP12.04□□□□□ -0.48
ERCC3-207ENST00000490062 MRPS16Q9Y3D3 137 aaKnown RBP12.04□□□□□ -0.48
ERCC3-207ENST00000490062 KMT2AQ03164 3969 aa12.03□□□□□ -0.48
ERCC3-207ENST00000490062 MT-ND4LP03901 98 aa12.03□□□□□ -0.48
ERCC3-207ENST00000490062 TWIST1Q15672 202 aa12.03□□□□□ -0.48
ERCC3-207ENST00000490062 LYPD5Q6UWN5 251 aa12.03□□□□□ -0.48
ERCC3-207ENST00000490062 BORCS7Q96B45 105 aa12.03□□□□□ -0.48
ERCC3-207ENST00000490062 ZNF56Q15929 161 aa12.02□□□□□ -0.49
ERCC3-207ENST00000490062 ZNRF2Q8NHG8 242 aa12.02□□□□□ -0.49
ERCC3-207ENST00000490062 FRZBQ92765 325 aa12.02□□□□□ -0.49
ERCC3-207ENST00000490062 SSTP61278 116 aa12.01□□□□□ -0.49
ERCC3-207ENST00000490062 UBE2DNLQ8IWF7 75 aa12.01□□□□□ -0.49
ERCC3-207ENST00000490062 Q9UF83 564 aa12.01□□□□□ -0.49
ERCC3-207ENST00000490062 A0A1B0GW15 77 aa12□□□□□ -0.49
ERCC3-207ENST00000490062 M0QY20 66 aa12□□□□□ -0.49
ERCC3-207ENST00000490062 RIGQ13278 110 aa12□□□□□ -0.49
ERCC3-207ENST00000490062 SMIM15Q7Z3B0 74 aa12□□□□□ -0.49
ERCC3-207ENST00000490062 TMEM191AQ9H0A3 160 aa12□□□□□ -0.49
ERCC3-207ENST00000490062 TRBV7-3A0A075B6L6 115 aa11.99□□□□□ -0.49
ERCC3-207ENST00000490062 H7C1H1 209 aa11.99□□□□□ -0.49
ERCC3-207ENST00000490062 RPL36AP83881 106 aaKnown RBP11.99□□□□□ -0.49
ERCC3-207ENST00000490062 ATP6V0E2Q8NHE4 81 aa11.99□□□□□ -0.49
ERCC3-207ENST00000490062 RPL36ALQ969Q0 106 aaKnown RBP11.99□□□□□ -0.49
ERCC3-207ENST00000490062 CTDSP1Q9GZU7 261 aa11.99□□□□□ -0.49
ERCC3-207ENST00000490062 GTSF1LQ9H1H1 148 aa11.99□□□□□ -0.49
ERCC3-207ENST00000490062 GAGE12JA6NER3 117 aa11.98□□□□□ -0.49
ERCC3-207ENST00000490062 UBE2D3P61077 147 aa11.98□□□□□ -0.49
ERCC3-207ENST00000490062 UBE2D2P62837 147 aa11.98□□□□□ -0.49
ERCC3-207ENST00000490062 GAGE1Q13065 139 aa11.98□□□□□ -0.49
ERCC3-207ENST00000490062 GAGE4Q13068 117 aa11.98□□□□□ -0.49
ERCC3-207ENST00000490062 GAGE5Q13069 117 aa11.98□□□□□ -0.49
ERCC3-207ENST00000490062 GAGE13Q4V321 117 aa11.98□□□□□ -0.49
ERCC3-207ENST00000490062 SUMO4Q6EEV6 95 aa11.98□□□□□ -0.49
ERCC3-207ENST00000490062 GATD1Q8NB37 220 aa11.98□□□□□ -0.49
ERCC3-207ENST00000490062 NEXN-AS1Q8NBZ9 246 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms