RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 C10orf113Q5VZT2 155 aa7.53□□□□□ -1.2
NOD1-208ENST00000489614 CEMP1Q6PRD7 247 aaPredicted RBP7.53□□□□□ -1.2
NOD1-208ENST00000489614 SCGB1D4Q6XE38 83 aa7.53□□□□□ -1.2
NOD1-208ENST00000489614 TWIST1Q15672 202 aa7.53□□□□□ -1.2
NOD1-208ENST00000489614 C2orf83Q53S99 150 aa7.53□□□□□ -1.2
NOD1-208ENST00000489614 FXYD5Q96DB9 178 aa7.53□□□□□ -1.2
NOD1-208ENST00000489614 MYO9AB2RTY4 2548 aa7.52□□□□□ -1.21
NOD1-208ENST00000489614 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.52□□□□□ -1.219e-8■■■■■ 29.1
NOD1-208ENST00000489614 RNASE2P10153 161 aaKnown RBP7.52□□□□□ -1.21
NOD1-208ENST00000489614 CUBNO60494 3623 aa7.52□□□□□ -1.21
NOD1-208ENST00000489614 GAS8-AS1O95177 125 aa7.52□□□□□ -1.21
NOD1-208ENST00000489614 UBE2D3P61077 147 aa7.52□□□□□ -1.21
NOD1-208ENST00000489614 UBE2D2P62837 147 aa7.52□□□□□ -1.21
NOD1-208ENST00000489614 MRPL51Q4U2R6 128 aaKnown RBP7.52□□□□□ -1.21
NOD1-208ENST00000489614 IGHV4-38-2P0DP08 117 aa7.51□□□□□ -1.21
NOD1-208ENST00000489614 EGR2P11161 476 aaPredicted RBP7.51□□□□□ -1.21
NOD1-208ENST00000489614 WT1-ASQ06250 92 aa7.51□□□□□ -1.21
NOD1-208ENST00000489614 LINC00305Q7Z4B0 112 aa7.51□□□□□ -1.21
NOD1-208ENST00000489614 BAALCQ8WXS3 180 aa7.51□□□□□ -1.21
NOD1-208ENST00000489614 ZMAT4Q9H898 229 aa7.51□□□□□ -1.21
NOD1-208ENST00000489614 PMVKQ15126 192 aa7.51□□□□□ -1.21
NOD1-208ENST00000489614 PATE2Q6UY27 113 aa7.51□□□□□ -1.21
NOD1-208ENST00000489614 GOLT1AQ6ZVE7 132 aa7.51□□□□□ -1.21
NOD1-208ENST00000489614 JMJD1CQ15652 2540 aa7.51□□□□□ -1.21
NOD1-208ENST00000489614 NBR2O15453 112 aa7.5□□□□□ -1.21
NOD1-208ENST00000489614 VMA21Q3ZAQ7 101 aa7.5□□□□□ -1.21
NOD1-208ENST00000489614 Q8N9W7 124 aa7.5□□□□□ -1.21
NOD1-208ENST00000489614 IGHV3-72A0A0B4J1Y9 119 aa7.5□□□□□ -1.21
NOD1-208ENST00000489614 TCRAP04437 139 aa7.5□□□□□ -1.21
NOD1-208ENST00000489614 LYRM7Q5U5X0 104 aa7.5□□□□□ -1.21
NOD1-208ENST00000489614 FAM104BQ5XKR9 115 aa7.5□□□□□ -1.21
NOD1-208ENST00000489614 LYZL1Q6UWQ5 148 aa7.5□□□□□ -1.21
NOD1-208ENST00000489614 WNK2Q9Y3S1 2297 aa7.5□□□□□ -1.21
NOD1-208ENST00000489614 RUSC1-AS1Q66K80 236 aa7.5□□□□□ -1.21
NOD1-208ENST00000489614 EDN2P20800 178 aa7.49□□□□□ -1.21
NOD1-208ENST00000489614 LINC00477Q96M19 166 aa7.49□□□□□ -1.21
NOD1-208ENST00000489614 Q96MF0 132 aa7.49□□□□□ -1.21
NOD1-208ENST00000489614 A6NDX4 124 aa7.49□□□□□ -1.21
NOD1-208ENST00000489614 RNF223E7ERA6 249 aa7.49□□□□□ -1.21
NOD1-208ENST00000489614 SBSPONQ8IVN8 264 aa7.49□□□□□ -1.21
NOD1-208ENST00000489614 EXOC3-AS1Q8N2X6 119 aa7.49□□□□□ -1.21
NOD1-208ENST00000489614 KIR2DL5BQ8NHK3 375 aa7.49□□□□□ -1.21
NOD1-208ENST00000489614 FMC1Q96HJ9 113 aa7.49□□□□□ -1.21
NOD1-208ENST00000489614 DUX3Q96PT4 197 aa7.49□□□□□ -1.21
NOD1-208ENST00000489614 ZNF580Q9UK33 172 aa7.49□□□□□ -1.21
NOD1-208ENST00000489614 LGALS1P09382 135 aaKnown RBP7.48□□□□□ -1.21
NOD1-208ENST00000489614 GATA1P15976 413 aaPredicted RBP7.48□□□□□ -1.21
NOD1-208ENST00000489614 C3orf22Q8N5N4 141 aa7.48□□□□□ -1.21
NOD1-208ENST00000489614 PLEKHB2Q96CS7 222 aa7.48□□□□□ -1.21
NOD1-208ENST00000489614 C1orf43Q9BWL3 253 aa7.48□□□□□ -1.21
NOD1-208ENST00000489614 Q9H3A6 140 aa7.48□□□□□ -1.21
NOD1-208ENST00000489614 SETD2Q9BYW2 2564 aaPredicted RBP7.48□□□□□ -1.21
NOD1-208ENST00000489614 MRPS12O15235 138 aaKnown RBP7.48□□□□□ -1.21
NOD1-208ENST00000489614 NDPQ00604 133 aa7.48□□□□□ -1.21
NOD1-208ENST00000489614 C10orf55Q5SWW7 151 aa7.48□□□□□ -1.21
NOD1-208ENST00000489614 GAGE2AQ6NT46 116 aa7.48□□□□□ -1.21
NOD1-208ENST00000489614 NDUFA11Q86Y39 141 aa7.48□□□□□ -1.21
NOD1-208ENST00000489614 C5orf56Q8N8D9 126 aa7.48□□□□□ -1.21
NOD1-208ENST00000489614 PKIGQ9Y2B9 76 aa7.48□□□□□ -1.21
NOD1-208ENST00000489614 ZANQ9Y493 2812 aa7.48□□□□□ -1.21
NOD1-208ENST00000489614 ZNF815PA8K554 130 aa7.48□□□□□ -1.21
NOD1-208ENST00000489614 MYCNOSP40205 109 aa7.48□□□□□ -1.21
NOD1-208ENST00000489614 KLHL30-AS1Q8NEE0 82 aa7.48□□□□□ -1.21
NOD1-208ENST00000489614 KLK15Q9H2R5 256 aa7.48□□□□□ -1.21
NOD1-208ENST00000489614 NAV3Q8IVL0 2385 aa7.47□□□□□ -1.21
NOD1-208ENST00000489614 IGHV7-81A0A0B4J1V7 117 aa7.47□□□□□ -1.21
NOD1-208ENST00000489614 Q86TA4 180 aa7.47□□□□□ -1.21
NOD1-208ENST00000489614 WFDC11Q8NEX6 87 aa7.47□□□□□ -1.21
NOD1-208ENST00000489614 LINC00527Q9UJ94 153 aa7.47□□□□□ -1.21
NOD1-208ENST00000489614 ZNF785A8K8V0 405 aa7.47□□□□□ -1.21
NOD1-208ENST00000489614 IGHG4P01861 327 aa7.47□□□□□ -1.21
NOD1-208ENST00000489614 UBE2D1P51668 147 aa7.47□□□□□ -1.21
NOD1-208ENST00000489614 PSMG4Q5JS54 123 aa7.47□□□□□ -1.21
NOD1-208ENST00000489614 THAP8Q8NA92 274 aa7.47□□□□□ -1.21
NOD1-208ENST00000489614 TRAV41A0A0B4J266 112 aa7.46□□□□□ -1.21
NOD1-208ENST00000489614 ITPR3Q14573 2671 aa7.46□□□□□ -1.21
NOD1-208ENST00000489614 IGKV1D-37A0A075B6S9 117 aa7.46□□□□□ -1.22
NOD1-208ENST00000489614 ATP5LO75964 103 aa7.46□□□□□ -1.22
NOD1-208ENST00000489614 ZNF22P17026 224 aaPredicted RBP7.46□□□□□ -1.22
NOD1-208ENST00000489614 RPL27AP46776 148 aaKnown RBP7.46□□□□□ -1.22
NOD1-208ENST00000489614 MSRB1Q9NZV6 116 aa7.46□□□□□ -1.22
NOD1-208ENST00000489614 I3L2K1 104 aa7.46□□□□□ -1.22
NOD1-208ENST00000489614 M0R2P5 195 aa7.46□□□□□ -1.22
NOD1-208ENST00000489614 CD69Q07108 199 aa7.46□□□□□ -1.22
NOD1-208ENST00000489614 MAPK1IP1LQ8NDC0 245 aa7.46□□□□□ -1.22
NOD1-208ENST00000489614 MYOZ3Q8TDC0 251 aa7.46□□□□□ -1.22
NOD1-208ENST00000489614 DSCR8Q96T75 97 aa7.46□□□□□ -1.22
NOD1-208ENST00000489614 IGHV3-21A0A0B4J1V1 117 aa7.45□□□□□ -1.22
NOD1-208ENST00000489614 hADV29S1A0JD25 119 aa7.45□□□□□ -1.22
NOD1-208ENST00000489614 SIGLEC15Q6ZMC9 328 aa7.45□□□□□ -1.22
NOD1-208ENST00000489614 TMEM219Q86XT9 240 aa7.45□□□□□ -1.22
NOD1-208ENST00000489614 ELANEP08246 267 aa7.45□□□□□ -1.22
NOD1-208ENST00000489614 CFC1BP0CG36 223 aa7.45□□□□□ -1.22
NOD1-208ENST00000489614 CFC1P0CG37 223 aa7.45□□□□□ -1.22
NOD1-208ENST00000489614 CRIP1P50238 77 aa7.45□□□□□ -1.22
NOD1-208ENST00000489614 CFHR3Q02985 330 aa7.45□□□□□ -1.22
NOD1-208ENST00000489614 MRPL36Q9P0J6 103 aaKnown RBP7.45□□□□□ -1.22
NOD1-208ENST00000489614 ZNF256Q9Y2P7 627 aaPredicted RBP7.45□□□□□ -1.22
NOD1-208ENST00000489614 OTOGQ6ZRI0 2925 aa7.45□□□□□ -1.22
NOD1-208ENST00000489614 MXRA5Q9NR99 2828 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms