RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 RNF222A6NCQ9 220 aa10.44□□□□□ -0.74
ERGIC3-217ENST00000488935 FAM74A7A6NL05 159 aa10.44□□□□□ -0.74
ERGIC3-217ENST00000488935 Q6ZSA8 131 aa10.44□□□□□ -0.74
ERGIC3-217ENST00000488935 TCTE3Q8IZS6 198 aa10.44□□□□□ -0.74
ERGIC3-217ENST00000488935 RBFOX3A6NFN3 312 aa10.43□□□□□ -0.74
ERGIC3-217ENST00000488935 SMLR1H3BR10 107 aa10.43□□□□□ -0.74
ERGIC3-217ENST00000488935 M0R381 172 aa10.43□□□□□ -0.74
ERGIC3-217ENST00000488935 SCXQ7RTU7 201 aa10.43□□□□□ -0.74
ERGIC3-217ENST00000488935 NIT1Q86X76 327 aa10.43□□□□□ -0.74
ERGIC3-217ENST00000488935 INO80EQ8NBZ0 244 aaPredicted RBP10.43□□□□□ -0.74
ERGIC3-217ENST00000488935 UBE2WQ96B02 151 aa10.43□□□□□ -0.74
ERGIC3-217ENST00000488935 IL36BQ9NZH7 164 aa10.43□□□□□ -0.74
ERGIC3-217ENST00000488935 CTXND1A0A1B0GTU2 59 aa10.42□□□□□ -0.74
ERGIC3-217ENST00000488935 OR11H4Q8NGC9 324 aa10.42□□□□□ -0.74
ERGIC3-217ENST00000488935 C1QBP02746 253 aa10.41□□□□□ -0.74
ERGIC3-217ENST00000488935 FAT3Q8TDW7 4589 aa10.41□□□□□ -0.74
ERGIC3-217ENST00000488935 MUC21A0A0G2JKD1 596 aa10.4□□□□□ -0.74
ERGIC3-217ENST00000488935 MUC21A0A140T8X8 626 aa10.4□□□□□ -0.74
ERGIC3-217ENST00000488935 HMSDA8MTL9 139 aa10.4□□□□□ -0.74
ERGIC3-217ENST00000488935 ARPC5O15511 151 aa10.4□□□□□ -0.74
ERGIC3-217ENST00000488935 PLA2G1BP04054 148 aaKnown RBP10.4□□□□□ -0.74
ERGIC3-217ENST00000488935 SSTP61278 116 aa10.4□□□□□ -0.74
ERGIC3-217ENST00000488935 RPL19P84098 196 aaKnown RBP10.4□□□□□ -0.74
ERGIC3-217ENST00000488935 SYT8Q8NBV8 401 aa10.4□□□□□ -0.74
ERGIC3-217ENST00000488935 SFRP2Q96HF1 295 aa10.4□□□□□ -0.74
ERGIC3-217ENST00000488935 BOLA1Q9Y3E2 137 aa10.4□□□□□ -0.74
ERGIC3-217ENST00000488935 PHLDA3Q9Y5J5 127 aa10.4□□□□□ -0.74
ERGIC3-217ENST00000488935 URGCP-MRPS24S4R325 110 aa10.4□□□□□ -0.74
ERGIC3-217ENST00000488935 A0A087WWC5 75 aa10.39□□□□□ -0.75
ERGIC3-217ENST00000488935 BORCS7-ASMTA0A0B4J1R7 106 aa10.39□□□□□ -0.75
ERGIC3-217ENST00000488935 A0A1B0GV50 99 aa10.39□□□□□ -0.75
ERGIC3-217ENST00000488935 FHITP49789 147 aa10.39□□□□□ -0.75
ERGIC3-217ENST00000488935 TOR2AQ5JU69 321 aa10.39□□□□□ -0.75
ERGIC3-217ENST00000488935 AKR1C8PQ5T2L2 129 aa10.39□□□□□ -0.75
ERGIC3-217ENST00000488935 MAP1LC3B2A6NCE7 125 aa10.38□□□□□ -0.75
ERGIC3-217ENST00000488935 TMEM262E9PQX1 116 aa10.38□□□□□ -0.75
ERGIC3-217ENST00000488935 TPT1P13693 172 aaKnown RBP10.38□□□□□ -0.75
ERGIC3-217ENST00000488935 ZNF345Q14585 488 aa10.38□□□□□ -0.75
ERGIC3-217ENST00000488935 PIK3CD-AS1Q5SR53 167 aa10.38□□□□□ -0.75
ERGIC3-217ENST00000488935 FAM162BQ5T6X4 162 aa10.38□□□□□ -0.75
ERGIC3-217ENST00000488935 CST9LP1Q5W188 147 aa10.38□□□□□ -0.75
ERGIC3-217ENST00000488935 MAP1LC3BQ9GZQ8 125 aa10.38□□□□□ -0.75
ERGIC3-217ENST00000488935 PKHD1L1Q86WI1 4243 aa10.38□□□□□ -0.75
ERGIC3-217ENST00000488935 A0A087WX48 190 aa10.37□□□□□ -0.75
ERGIC3-217ENST00000488935 RHODO00212 210 aa10.37□□□□□ -0.75
ERGIC3-217ENST00000488935 UBE2G1P62253 170 aa10.37□□□□□ -0.75
ERGIC3-217ENST00000488935 ZNF674Q2M3X9 581 aa10.37□□□□□ -0.75
ERGIC3-217ENST00000488935 DNLZQ5SXM8 178 aa10.37□□□□□ -0.75
ERGIC3-217ENST00000488935 CIRBP-AS1Q8TBR5 109 aa10.37□□□□□ -0.75
ERGIC3-217ENST00000488935 HIST1H2BAQ96A08 127 aa10.37□□□□□ -0.75
ERGIC3-217ENST00000488935 CYTL1Q9NRR1 136 aa10.37□□□□□ -0.75
ERGIC3-217ENST00000488935 A0A0D9SG52 128 aa10.36□□□□□ -0.75
ERGIC3-217ENST00000488935 IGLV2-8P01709 118 aa10.36□□□□□ -0.75
ERGIC3-217ENST00000488935 KRTAP10-4P60372 401 aaPredicted RBP10.36□□□□□ -0.75
ERGIC3-217ENST00000488935 UBE2D3P61077 147 aa10.36□□□□□ -0.75
ERGIC3-217ENST00000488935 UBE2D2P62837 147 aa10.36□□□□□ -0.75
ERGIC3-217ENST00000488935 LINC01559Q495D7 138 aa10.36□□□□□ -0.75
ERGIC3-217ENST00000488935 KCNRGQ8N5I3 272 aa10.36□□□□□ -0.75
ERGIC3-217ENST00000488935 C15orf54Q8N8G6 183 aa10.36□□□□□ -0.75
ERGIC3-217ENST00000488935 Q8N976 141 aa10.36□□□□□ -0.75
ERGIC3-217ENST00000488935 RMI2Q96E14 147 aa10.36□□□□□ -0.75
ERGIC3-217ENST00000488935 ZFP30Q9Y2G7 519 aa10.36□□□□□ -0.75
ERGIC3-217ENST00000488935 KRTAP29-1A8MX34 341 aaPredicted RBP10.35□□□□□ -0.75
ERGIC3-217ENST00000488935 PAGE4O60829 102 aa10.35□□□□□ -0.75
ERGIC3-217ENST00000488935 ENHOQ6UWT2 76 aa10.35□□□□□ -0.75
ERGIC3-217ENST00000488935 OR10AG1Q8NH19 301 aa10.35□□□□□ -0.75
ERGIC3-217ENST00000488935 DEFB104AQ8WTQ1 72 aa10.35□□□□□ -0.75
ERGIC3-217ENST00000488935 FMC1Q96HJ9 113 aa10.35□□□□□ -0.75
ERGIC3-217ENST00000488935 CHAC1Q9BUX1 264 aa10.35□□□□□ -0.75
ERGIC3-217ENST00000488935 LTAP01374 205 aa10.34□□□□□ -0.75
ERGIC3-217ENST00000488935 AKR1C3P42330 323 aa10.34□□□□□ -0.75
ERGIC3-217ENST00000488935 RPL36AP83881 106 aaKnown RBP10.34□□□□□ -0.75
ERGIC3-217ENST00000488935 MPV17L2Q567V2 206 aa10.34□□□□□ -0.75
ERGIC3-217ENST00000488935 COX8CQ7Z4L0 72 aa10.34□□□□□ -0.75
ERGIC3-217ENST00000488935 ZFP82Q8N141 532 aa10.34□□□□□ -0.75
ERGIC3-217ENST00000488935 NEXN-AS1Q8NBZ9 246 aa10.34□□□□□ -0.75
ERGIC3-217ENST00000488935 RPL36ALQ969Q0 106 aaKnown RBP10.34□□□□□ -0.75
ERGIC3-217ENST00000488935 COX11Q9Y6N1 276 aa10.34□□□□□ -0.75
ERGIC3-217ENST00000488935 TRBV7-3A0A075B6L6 115 aa10.33□□□□□ -0.76
ERGIC3-217ENST00000488935 PFDN1O60925 122 aa10.33□□□□□ -0.76
ERGIC3-217ENST00000488935 ZNF56Q15929 161 aa10.33□□□□□ -0.76
ERGIC3-217ENST00000488935 CLPSL2Q6UWE3 100 aa10.33□□□□□ -0.76
ERGIC3-217ENST00000488935 SCO2A0A1W2PP80 73 aa10.32□□□□□ -0.76
ERGIC3-217ENST00000488935 KANTRA0A1W2PQU2 76 aa10.32□□□□□ -0.76
ERGIC3-217ENST00000488935 KCNIP4Q6PIL6 250 aa10.32□□□□□ -0.76
ERGIC3-217ENST00000488935 TMUB2Q71RG4 321 aa10.32□□□□□ -0.76
ERGIC3-217ENST00000488935 STOML3Q8TAV4 291 aa10.32□□□□□ -0.76
ERGIC3-217ENST00000488935 NKX6-2Q9C056 277 aaPredicted RBP10.32□□□□□ -0.76
ERGIC3-217ENST00000488935 TRBV6-8A0A0A6YYG3 113 aa10.31□□□□□ -0.76
ERGIC3-217ENST00000488935 BCL2L11O43521 198 aa10.31□□□□□ -0.76
ERGIC3-217ENST00000488935 HLA-DQA1P01909 254 aa10.31□□□□□ -0.76
ERGIC3-217ENST00000488935 ANGP03950 147 aaKnown RBP10.31□□□□□ -0.76
ERGIC3-217ENST00000488935 PRR27Q6MZM9 219 aa10.31□□□□□ -0.76
ERGIC3-217ENST00000488935 CHCHD5Q9BSY4 110 aa10.31□□□□□ -0.76
ERGIC3-217ENST00000488935 C1orf43Q9BWL3 253 aa10.31□□□□□ -0.76
ERGIC3-217ENST00000488935 HMCN2Q8NDA2 5059 aa10.3□□□□□ -0.76
ERGIC3-217ENST00000488935 TRBV10-1A0A0K0K1A3 114 aa10.3□□□□□ -0.76
ERGIC3-217ENST00000488935 USP17L23D6RBM5 183 aa10.3□□□□□ -0.76
ERGIC3-217ENST00000488935 F5H697 171 aa10.3□□□□□ -0.76
ERGIC3-217ENST00000488935 HNRNPA3P51991 378 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms