RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 IGHV3-73A0A0B4J1V6 119 aa9.38□□□□□ -0.91
SPTLC1-207ENST00000488921 TRAV8-6A0A0B4J262 113 aa9.38□□□□□ -0.91
SPTLC1-207ENST00000488921 CRYGDP07320 174 aa9.38□□□□□ -0.91
SPTLC1-207ENST00000488921 GNG4P50150 75 aa9.38□□□□□ -0.91
SPTLC1-207ENST00000488921 DNLZQ5SXM8 178 aa9.38□□□□□ -0.91
SPTLC1-207ENST00000488921 BAGE2Q86Y30 109 aa9.38□□□□□ -0.91
SPTLC1-207ENST00000488921 SYT8Q8NBV8 401 aa9.38□□□□□ -0.91
SPTLC1-207ENST00000488921 PARLQ9H300 379 aa9.38□□□□□ -0.91
SPTLC1-207ENST00000488921 MSRB1Q9NZV6 116 aa9.38□□□□□ -0.91
SPTLC1-207ENST00000488921 RYR1P21817 5038 aa9.37□□□□□ -0.91
SPTLC1-207ENST00000488921 DNAH5Q8TE73 4624 aa9.37□□□□□ -0.91
SPTLC1-207ENST00000488921 IGHV3-38A0A0C4DH36 116 aa9.37□□□□□ -0.91
SPTLC1-207ENST00000488921 KRBOX1C9JBD0 128 aa9.37□□□□□ -0.91
SPTLC1-207ENST00000488921 H3BVH4 76 aa9.37□□□□□ -0.91
SPTLC1-207ENST00000488921 SH2D1AO60880 128 aa9.37□□□□□ -0.91
SPTLC1-207ENST00000488921 LTAP01374 205 aa9.37□□□□□ -0.91
SPTLC1-207ENST00000488921 SRSF3P84103 164 aaKnown RBP9.37□□□□□ -0.91
SPTLC1-207ENST00000488921 FAM74A3Q4VXF1 159 aa9.37□□□□□ -0.91
SPTLC1-207ENST00000488921 OR10J3Q5JRS4 329 aa9.37□□□□□ -0.91
SPTLC1-207ENST00000488921 ZNF727A8MUV8 499 aa9.36□□□□□ -0.91
SPTLC1-207ENST00000488921 M0R036 132 aa9.36□□□□□ -0.91
SPTLC1-207ENST00000488921 RHODO00212 210 aa9.36□□□□□ -0.91
SPTLC1-207ENST00000488921 KRTAP10-2P60368 255 aa9.36□□□□□ -0.91
SPTLC1-207ENST00000488921 NDUFA5Q16718 116 aa9.36□□□□□ -0.91
SPTLC1-207ENST00000488921 LINC01556Q5JQF7 62 aa9.36□□□□□ -0.91
SPTLC1-207ENST00000488921 SMIM7Q9BQ49 75 aa9.36□□□□□ -0.91
SPTLC1-207ENST00000488921 DERL1Q9BUN8 251 aa9.36□□□□□ -0.91
SPTLC1-207ENST00000488921 BIN3Q9NQY0 253 aa9.36□□□□□ -0.91
SPTLC1-207ENST00000488921 CRIP1P50238 77 aa9.35□□□□□ -0.91
SPTLC1-207ENST00000488921 LINC01559Q495D7 138 aa9.35□□□□□ -0.91
SPTLC1-207ENST00000488921 CENPWQ5EE01 88 aa9.35□□□□□ -0.91
SPTLC1-207ENST00000488921 LELP1Q5T871 98 aa9.35□□□□□ -0.91
SPTLC1-207ENST00000488921 CDPF1Q6NVV7 123 aa9.35□□□□□ -0.91
SPTLC1-207ENST00000488921 ATP6V0E2Q8NHE4 81 aa9.35□□□□□ -0.91
SPTLC1-207ENST00000488921 SMIM12Q96EX1 92 aa9.35□□□□□ -0.91
SPTLC1-207ENST00000488921 KRTAP17-1Q9BYP8 105 aa9.35□□□□□ -0.91
SPTLC1-207ENST00000488921 GTSF1LQ9H1H1 148 aa9.35□□□□□ -0.91
SPTLC1-207ENST00000488921 PHLDA3Q9Y5J5 127 aa9.35□□□□□ -0.91
SPTLC1-207ENST00000488921 C9JQL5 133 aa9.34□□□□□ -0.91
SPTLC1-207ENST00000488921 ARMS2P0C7Q2 107 aa9.34□□□□□ -0.91
SPTLC1-207ENST00000488921 PGPEP1Q9NXJ5 209 aa9.34□□□□□ -0.91
SPTLC1-207ENST00000488921 TNFRSF18Q9Y5U5 241 aa9.34□□□□□ -0.91
SPTLC1-207ENST00000488921 APOBP04114 4563 aaKnown RBP9.34□□□□□ -0.91
SPTLC1-207ENST00000488921 TMEM241Q24JQ0 296 aa9.33□□□□□ -0.92
SPTLC1-207ENST00000488921 ZFP82Q8N141 532 aa9.33□□□□□ -0.92
SPTLC1-207ENST00000488921 DAZAP1Q96EP5 407 aaKnown RBP9.33□□□□□ -0.92
SPTLC1-207ENST00000488921 PCLOQ9Y6V0 5065 aa9.33□□□□□ -0.92
SPTLC1-207ENST00000488921 A0A087WTM6 91 aa9.32□□□□□ -0.92
SPTLC1-207ENST00000488921 TMSB15BA0A087X1C1 80 aa9.32□□□□□ -0.92
SPTLC1-207ENST00000488921 GRIFINA4D1Z8 144 aa9.32□□□□□ -0.92
SPTLC1-207ENST00000488921 PSCAO43653 123 aa9.32□□□□□ -0.92
SPTLC1-207ENST00000488921 FAM74A4Q5TZK3 123 aa9.32□□□□□ -0.92
SPTLC1-207ENST00000488921 UFSP1Q6NVU6 142 aa9.32□□□□□ -0.92
SPTLC1-207ENST00000488921 MAPKAPK5-AS1Q8N8E1 139 aa9.32□□□□□ -0.92
SPTLC1-207ENST00000488921 SCRT2Q9NQ03 307 aa9.32□□□□□ -0.92
SPTLC1-207ENST00000488921 NAT8Q9UHE5 227 aa9.32□□□□□ -0.92
SPTLC1-207ENST00000488921 A0A087WWC5 75 aa9.31□□□□□ -0.92
SPTLC1-207ENST00000488921 TMEM218A2RU14 115 aa9.31□□□□□ -0.92
SPTLC1-207ENST00000488921 GAGE12JA6NER3 117 aa9.31□□□□□ -0.92
SPTLC1-207ENST00000488921 IBA57-AS1B1ANH7 110 aa9.31□□□□□ -0.92
SPTLC1-207ENST00000488921 F8W036 122 aa9.31□□□□□ -0.92
SPTLC1-207ENST00000488921 M0R381 172 aa9.31□□□□□ -0.92
SPTLC1-207ENST00000488921 CXCL1P09341 107 aa9.31□□□□□ -0.92
SPTLC1-207ENST00000488921 LINC00694P0DN24 101 aa9.31□□□□□ -0.92
SPTLC1-207ENST00000488921 GAGE1Q13065 139 aa9.31□□□□□ -0.92
SPTLC1-207ENST00000488921 GAGE4Q13068 117 aa9.31□□□□□ -0.92
SPTLC1-207ENST00000488921 GAGE5Q13069 117 aa9.31□□□□□ -0.92
SPTLC1-207ENST00000488921 LAGE3Q14657 143 aa9.31□□□□□ -0.92
SPTLC1-207ENST00000488921 GAGE13Q4V321 117 aa9.31□□□□□ -0.92
SPTLC1-207ENST00000488921 PRR27Q6MZM9 219 aa9.31□□□□□ -0.92
SPTLC1-207ENST00000488921 OCC1Q8TAD7 63 aa9.31□□□□□ -0.92
SPTLC1-207ENST00000488921 SFRP2Q96HF1 295 aa9.31□□□□□ -0.92
SPTLC1-207ENST00000488921 MLST8Q9BVC4 326 aa9.31□□□□□ -0.92
SPTLC1-207ENST00000488921 JPT2Q9H910 190 aa9.31□□□□□ -0.92
SPTLC1-207ENST00000488921 Q6ZSN1 163 aa9.3□□□□□ -0.92
SPTLC1-207ENST00000488921 SAMD10Q9BYL1 202 aa9.3□□□□□ -0.92
SPTLC1-207ENST00000488921 TRBV20OR9-2A0A075B6H5 130 aa9.29□□□□□ -0.92
SPTLC1-207ENST00000488921 IGHV3-30P01768 117 aa9.29□□□□□ -0.92
SPTLC1-207ENST00000488921 IGHV3-33P01772 117 aa9.29□□□□□ -0.92
SPTLC1-207ENST00000488921 IGHV3-30-3P0DP02 117 aa9.29□□□□□ -0.92
SPTLC1-207ENST00000488921 IGHV3-30-5P0DP03 117 aa9.29□□□□□ -0.92
SPTLC1-207ENST00000488921 C14orf178Q8N769 122 aaPredicted RBP9.29□□□□□ -0.92
SPTLC1-207ENST00000488921 A0A087WWL8 130 aa9.28□□□□□ -0.92
SPTLC1-207ENST00000488921 TRBV10-1A0A0K0K1A3 114 aa9.28□□□□□ -0.92
SPTLC1-207ENST00000488921 ADIRFQ15847 76 aa9.28□□□□□ -0.92
SPTLC1-207ENST00000488921 SLC7A5P1Q8MH63 180 aa9.28□□□□□ -0.92
SPTLC1-207ENST00000488921 SEC11CQ9BY50 192 aa9.28□□□□□ -0.92
SPTLC1-207ENST00000488921 Q9HAA7 133 aa9.28□□□□□ -0.92
SPTLC1-207ENST00000488921 IGLV2-8P01709 118 aa9.27□□□□□ -0.93
SPTLC1-207ENST00000488921 P01737 135 aa9.27□□□□□ -0.93
SPTLC1-207ENST00000488921 PNRC1Q12796 327 aaPredicted RBP9.27□□□□□ -0.93
SPTLC1-207ENST00000488921 LINC01551Q86U37 167 aa9.27□□□□□ -0.93
SPTLC1-207ENST00000488921 Q8N1X5 172 aa9.27□□□□□ -0.93
SPTLC1-207ENST00000488921 C15orf54Q8N8G6 183 aa9.27□□□□□ -0.93
SPTLC1-207ENST00000488921 TM2D2Q9BX73 214 aa9.27□□□□□ -0.93
SPTLC1-207ENST00000488921 XKRY2A2RUG3 117 aa9.26□□□□□ -0.93
SPTLC1-207ENST00000488921 OR5AL1P0C617 328 aa9.26□□□□□ -0.93
SPTLC1-207ENST00000488921 RPL23P62829 140 aaKnown RBP9.26□□□□□ -0.93
SPTLC1-207ENST00000488921 RPL36AP83881 106 aaKnown RBP9.26□□□□□ -0.93
SPTLC1-207ENST00000488921 RPL19P84098 196 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms