RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 CYSLTR1Q9Y271 337 aa9.46□□□□□ -0.89
CLIC4-202ENST00000488683 ZNF256Q9Y2P7 627 aaPredicted RBP9.46□□□□□ -0.89
CLIC4-202ENST00000488683 KLLNB2CW77 178 aa9.46□□□□□ -0.9
CLIC4-202ENST00000488683 B4DSR2 109 aa9.46□□□□□ -0.9
CLIC4-202ENST00000488683 PSMB8P28062 276 aa9.46□□□□□ -0.9
CLIC4-202ENST00000488683 KRTAP10-9P60411 292 aa9.46□□□□□ -0.9
CLIC4-202ENST00000488683 HIGD1BQ9P298 99 aa9.46□□□□□ -0.9
CLIC4-202ENST00000488683 PRSS29PA6NIE9 313 aa9.45□□□□□ -0.9
CLIC4-202ENST00000488683 LINC00315P59091 139 aa9.45□□□□□ -0.9
CLIC4-202ENST00000488683 SAMD5Q5TGI4 173 aa9.45□□□□□ -0.9
CLIC4-202ENST00000488683 FAM159AQ6UWV7 190 aa9.45□□□□□ -0.9
CLIC4-202ENST00000488683 TOMM6Q96B49 74 aa9.45□□□□□ -0.9
CLIC4-202ENST00000488683 SMIM13P0DJ93 91 aa9.45□□□□□ -0.9
CLIC4-202ENST00000488683 SUMO4Q6EEV6 95 aa9.45□□□□□ -0.9
CLIC4-202ENST00000488683 PLEKHB2Q96CS7 222 aa9.45□□□□□ -0.9
CLIC4-202ENST00000488683 KIF25-AS1Q9Y6Z4 181 aa9.45□□□□□ -0.9
CLIC4-202ENST00000488683 ACANP16112 2415 aa9.44□□□□□ -0.9
CLIC4-202ENST00000488683 K7EP34 96 aa9.44□□□□□ -0.9
CLIC4-202ENST00000488683 COTL1Q14019 142 aa9.44□□□□□ -0.9
CLIC4-202ENST00000488683 HIST1H4GQ99525 98 aa9.44□□□□□ -0.9
CLIC4-202ENST00000488683 C20orf78Q9BR46 151 aa9.44□□□□□ -0.9
CLIC4-202ENST00000488683 TSHBP01222 138 aa9.44□□□□□ -0.9
CLIC4-202ENST00000488683 MED14OSP0DP75 135 aa9.44□□□□□ -0.9
CLIC4-202ENST00000488683 ORMDL2Q53FV1 153 aa9.44□□□□□ -0.9
CLIC4-202ENST00000488683 CEND1Q8N111 149 aa9.44□□□□□ -0.9
CLIC4-202ENST00000488683 NEXN-AS1Q8NBZ9 246 aa9.44□□□□□ -0.9
CLIC4-202ENST00000488683 TP53TG1Q9Y2A0 90 aa9.44□□□□□ -0.9
CLIC4-202ENST00000488683 IGHV4OR15-8A0A075B7B6 117 aa9.43□□□□□ -0.9
CLIC4-202ENST00000488683 A0A087WW49 117 aa9.43□□□□□ -0.9
CLIC4-202ENST00000488683 F8VRH5 84 aa9.43□□□□□ -0.9
CLIC4-202ENST00000488683 Q9UF83 564 aa9.43□□□□□ -0.9
CLIC4-202ENST00000488683 IGHV3-64A0A075B6Q5 118 aa9.43□□□□□ -0.9
CLIC4-202ENST00000488683 NXPH4O95158 308 aa9.43□□□□□ -0.9
CLIC4-202ENST00000488683 CRYGDP07320 174 aa9.43□□□□□ -0.9
CLIC4-202ENST00000488683 PROK1P58294 105 aa9.43□□□□□ -0.9
CLIC4-202ENST00000488683 ITPR3Q14573 2671 aa9.43□□□□□ -0.9
CLIC4-202ENST00000488683 UBR5O95071 2799 aaPredicted RBP9.42□□□□□ -0.9
CLIC4-202ENST00000488683 C2CD3Q4AC94 2353 aa9.42□□□□□ -0.9
CLIC4-202ENST00000488683 TRBV7-9A0A0J9YWB2 115 aa9.42□□□□□ -0.9
CLIC4-202ENST00000488683 H7C1H1 209 aa9.42□□□□□ -0.9
CLIC4-202ENST00000488683 K7EMT4 169 aa9.42□□□□□ -0.9
CLIC4-202ENST00000488683 P0DMU3 169 aa9.42□□□□□ -0.9
CLIC4-202ENST00000488683 FAM231AP0DMU4 169 aa9.42□□□□□ -0.9
CLIC4-202ENST00000488683 FAM231CP0DMU5 169 aa9.42□□□□□ -0.9
CLIC4-202ENST00000488683 PLNP26678 52 aa9.42□□□□□ -0.9
CLIC4-202ENST00000488683 Q8N1Y9 231 aa9.42□□□□□ -0.9
CLIC4-202ENST00000488683 PHLDA1Q8WV24 401 aaPredicted RBP9.42□□□□□ -0.9
CLIC4-202ENST00000488683 TRAV12-1A0A0B4J245 112 aa9.42□□□□□ -0.9
CLIC4-202ENST00000488683 KNCNA6PVL3 124 aa9.42□□□□□ -0.9
CLIC4-202ENST00000488683 SLC25A16P16260 332 aa9.42□□□□□ -0.9
CLIC4-202ENST00000488683 ZNF56Q15929 161 aa9.41□□□□□ -0.9
CLIC4-202ENST00000488683 POM121L12Q8N7R1 296 aa9.41□□□□□ -0.9
CLIC4-202ENST00000488683 PRADC1Q9BSG0 188 aa9.41□□□□□ -0.9
CLIC4-202ENST00000488683 MTORP42345 2549 aa9.41□□□□□ -0.9
CLIC4-202ENST00000488683 FLNAP21333 2647 aaKnown RBP9.41□□□□□ -0.9
CLIC4-202ENST00000488683 A0A096LNT2 108 aa9.41□□□□□ -0.9
CLIC4-202ENST00000488683 HLA-DRB4P13762 266 aa9.41□□□□□ -0.9
CLIC4-202ENST00000488683 SLURP1P55000 103 aa9.41□□□□□ -0.9
CLIC4-202ENST00000488683 HLA-DRB4X5D2U9 266 aa9.41□□□□□ -0.9
CLIC4-202ENST00000488683 TENM4Q6N022 2769 aa9.41□□□□□ -0.9
CLIC4-202ENST00000488683 C11orf86A6NJI1 115 aa9.4□□□□□ -0.9
CLIC4-202ENST00000488683 RBMY1A1P0DJD3 496 aaKnown RBP9.4□□□□□ -0.9
CLIC4-202ENST00000488683 RBMY1CP0DJD4 496 aa9.4□□□□□ -0.9
CLIC4-202ENST00000488683 FABP2P12104 132 aa9.4□□□□□ -0.9
CLIC4-202ENST00000488683 RPL24P83731 157 aaKnown RBP9.4□□□□□ -0.9
CLIC4-202ENST00000488683 RBMY1FQ15415 496 aaKnown RBP9.4□□□□□ -0.9
CLIC4-202ENST00000488683 GTF2H5Q6ZYL4 71 aa9.4□□□□□ -0.9
CLIC4-202ENST00000488683 C11orf44Q8N8P7 122 aa9.4□□□□□ -0.9
CLIC4-202ENST00000488683 BBC3Q96PG8 261 aaPredicted RBP9.4□□□□□ -0.9
CLIC4-202ENST00000488683 TM2D2Q9BX73 214 aa9.4□□□□□ -0.9
CLIC4-202ENST00000488683 SETXQ7Z333 2677 aaKnown RBP9.4□□□□□ -0.9
CLIC4-202ENST00000488683 H3BMG7 143 aa9.4□□□□□ -0.9
CLIC4-202ENST00000488683 ID1P41134 155 aa9.4□□□□□ -0.9
CLIC4-202ENST00000488683 SDHAF1A6NFY7 115 aa9.4□□□□□ -0.91
CLIC4-202ENST00000488683 OR11H12B2RN74 326 aa9.4□□□□□ -0.91
CLIC4-202ENST00000488683 LGALS1P09382 135 aaKnown RBP9.4□□□□□ -0.91
CLIC4-202ENST00000488683 RNASE13Q5GAN3 156 aaKnown RBP9.4□□□□□ -0.91
CLIC4-202ENST00000488683 MORN3Q6PF18 240 aaPredicted RBP9.4□□□□□ -0.91
CLIC4-202ENST00000488683 ZFP2Q6ZN57 461 aa9.4□□□□□ -0.91
CLIC4-202ENST00000488683 OR11H1Q8NG94 326 aa9.4□□□□□ -0.91
CLIC4-202ENST00000488683 OR11H2Q8NH07 326 aa9.4□□□□□ -0.91
CLIC4-202ENST00000488683 ZNF580Q9UK33 172 aa9.4□□□□□ -0.91
CLIC4-202ENST00000488683 HOXA3O43365 443 aaPredicted RBP9.39□□□□□ -0.91
CLIC4-202ENST00000488683 TSPEAR-AS2P59090 65 aa9.39□□□□□ -0.91
CLIC4-202ENST00000488683 C12orf74Q32Q52 190 aa9.39□□□□□ -0.91
CLIC4-202ENST00000488683 ZNF815PA8K554 130 aa9.39□□□□□ -0.91
CLIC4-202ENST00000488683 K7ERU9 68 aa9.39□□□□□ -0.91
CLIC4-202ENST00000488683 CR1P17927 2039 aa9.39□□□□□ -0.91
CLIC4-202ENST00000488683 SCGB2A2Q13296 93 aa9.39□□□□□ -0.91
CLIC4-202ENST00000488683 KHDC1LQ5JSQ8 128 aa9.39□□□□□ -0.91
CLIC4-202ENST00000488683 LINC01356Q8N9X3 169 aa9.39□□□□□ -0.91
CLIC4-202ENST00000488683 A0A0J9YX75 114 aa9.38□□□□□ -0.91
CLIC4-202ENST00000488683 MYMXA0A1B0GTQ4 84 aa9.38□□□□□ -0.91
CLIC4-202ENST00000488683 IGLL5B9A064 214 aa9.38□□□□□ -0.91
CLIC4-202ENST00000488683 HOXD3P31249 432 aaPredicted RBP9.38□□□□□ -0.91
CLIC4-202ENST00000488683 WFDC2Q14508 124 aa9.38□□□□□ -0.91
CLIC4-202ENST00000488683 CEMP1Q6PRD7 247 aaPredicted RBP9.38□□□□□ -0.91
CLIC4-202ENST00000488683 IGLV4-69A0A075B6H9 119 aa9.38□□□□□ -0.91
CLIC4-202ENST00000488683 GATA3P23771 443 aa9.38□□□□□ -0.91
CLIC4-202ENST00000488683 POLR2KP53803 58 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms