RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 SPINK4O60575 86 aa7.78□□□□□ -1.16
LCN2-206ENST00000488391 ARMS2P0C7Q2 107 aa7.78□□□□□ -1.16
LCN2-206ENST00000488391 S100A4P26447 101 aaKnown RBP7.78□□□□□ -1.16
LCN2-206ENST00000488391 FXYD7P58549 80 aa7.78□□□□□ -1.16
LCN2-206ENST00000488391 MUC21Q5SSG8 566 aa7.78□□□□□ -1.16
LCN2-206ENST00000488391 TMEM136Q6ZRR5 245 aa7.78□□□□□ -1.16
LCN2-206ENST00000488391 TPPP3Q9BW30 176 aa7.78□□□□□ -1.16
LCN2-206ENST00000488391 SCRT2Q9NQ03 307 aa7.78□□□□□ -1.16
LCN2-206ENST00000488391 TRAPPC1Q9Y5R8 145 aa7.78□□□□□ -1.16
LCN2-206ENST00000488391 C16orf90A8MZG2 172 aa7.77□□□□□ -1.17
LCN2-206ENST00000488391 SNURFLB1AK76 121 aa7.77□□□□□ -1.17
LCN2-206ENST00000488391 PHOX2AO14813 284 aa7.77□□□□□ -1.17
LCN2-206ENST00000488391 TRGC2P03986 189 aa7.77□□□□□ -1.17
LCN2-206ENST00000488391 ZNF493Q6ZR52 646 aa7.77□□□□□ -1.17
LCN2-206ENST00000488391 TP53TG3Q9ULZ0 132 aa7.77□□□□□ -1.17
LCN2-206ENST00000488391 HSPG2P98160 4391 aa7.77□□□□□ -1.17
LCN2-206ENST00000488391 IGHV3-16A0A0C4DH30 117 aa7.76□□□□□ -1.17
LCN2-206ENST00000488391 H3BVH4 76 aa7.76□□□□□ -1.17
LCN2-206ENST00000488391 GNRH2O43555 120 aa7.76□□□□□ -1.17
LCN2-206ENST00000488391 CDK2AP2O75956 126 aa7.76□□□□□ -1.17
LCN2-206ENST00000488391 RNASE3P12724 160 aaKnown RBP7.76□□□□□ -1.17
LCN2-206ENST00000488391 CAMPP49913 170 aa7.76□□□□□ -1.17
LCN2-206ENST00000488391 RAB4BP61018 213 aa7.76□□□□□ -1.17
LCN2-206ENST00000488391 C1orf134Q5TEV5 83 aa7.76□□□□□ -1.17
LCN2-206ENST00000488391 CSNK1G2-AS1Q8NCQ2 148 aa7.76□□□□□ -1.17
LCN2-206ENST00000488391 C9orf85Q96MD7 179 aa7.76□□□□□ -1.17
LCN2-206ENST00000488391 MRPL18Q9H0U6 180 aaKnown RBP7.76□□□□□ -1.17
LCN2-206ENST00000488391 XCL2Q9UBD3 114 aa7.76□□□□□ -1.17
LCN2-206ENST00000488391 NXPH4O95158 308 aa7.75□□□□□ -1.17
LCN2-206ENST00000488391 NTF3P20783 257 aa7.75□□□□□ -1.17
LCN2-206ENST00000488391 FABP9Q0Z7S8 132 aa7.75□□□□□ -1.17
LCN2-206ENST00000488391 TWIST1Q15672 202 aa7.75□□□□□ -1.17
LCN2-206ENST00000488391 OR10AG1Q8NH19 301 aa7.75□□□□□ -1.17
LCN2-206ENST00000488391 FRZBQ92765 325 aa7.75□□□□□ -1.17
LCN2-206ENST00000488391 LINC01587Q99440 93 aa7.75□□□□□ -1.17
LCN2-206ENST00000488391 GOLT1BQ9Y3E0 138 aa7.75□□□□□ -1.17
LCN2-206ENST00000488391 PHLDA3Q9Y5J5 127 aa7.75□□□□□ -1.17
LCN2-206ENST00000488391 CBY3A6NI87 242 aa7.74□□□□□ -1.17
LCN2-206ENST00000488391 APCSP02743 223 aa7.74□□□□□ -1.17
LCN2-206ENST00000488391 TRGC1P0CF51 173 aa7.74□□□□□ -1.17
LCN2-206ENST00000488391 TNP2Q05952 138 aa7.74□□□□□ -1.17
LCN2-206ENST00000488391 PIK3CD-AS1Q5SR53 167 aa7.74□□□□□ -1.17
LCN2-206ENST00000488391 SPANXN1Q5VSR9 72 aa7.74□□□□□ -1.17
LCN2-206ENST00000488391 DMRTA1Q5VZB9 504 aa7.74□□□□□ -1.17
LCN2-206ENST00000488391 SMIM15Q7Z3B0 74 aa7.74□□□□□ -1.17
LCN2-206ENST00000488391 ZFP82Q8N141 532 aa7.74□□□□□ -1.17
LCN2-206ENST00000488391 C1orf158Q8N1D5 194 aa7.74□□□□□ -1.17
LCN2-206ENST00000488391 PTH2Q96A98 100 aa7.74□□□□□ -1.17
LCN2-206ENST00000488391 TMEM208Q9BTX3 173 aa7.74□□□□□ -1.17
LCN2-206ENST00000488391 TMEM191AQ9H0A3 160 aa7.74□□□□□ -1.17
LCN2-206ENST00000488391 TMA7Q9Y2S6 64 aaKnown RBP7.74□□□□□ -1.17
LCN2-206ENST00000488391 NACAE9PAV3 2078 aa7.74□□□□□ -1.17
LCN2-206ENST00000488391 EMP1P54849 157 aa7.73□□□□□ -1.17
LCN2-206ENST00000488391 ZNF415Q09FC8 603 aa7.73□□□□□ -1.17
LCN2-206ENST00000488391 Q8N1X5 172 aa7.73□□□□□ -1.17
LCN2-206ENST00000488391 SYT8Q8NBV8 401 aa7.73□□□□□ -1.17
LCN2-206ENST00000488391 SPXQ9BT56 116 aa7.73□□□□□ -1.17
LCN2-206ENST00000488391 HERC1Q15751 4861 aa7.73□□□□□ -1.17
LCN2-206ENST00000488391 HIST1H2BKO60814 126 aa7.72□□□□□ -1.17
LCN2-206ENST00000488391 HIST1H2BJP06899 126 aa7.72□□□□□ -1.17
LCN2-206ENST00000488391 HIST1H2BOP23527 126 aa7.72□□□□□ -1.17
LCN2-206ENST00000488391 HIST1H2BBP33778 126 aa7.72□□□□□ -1.17
LCN2-206ENST00000488391 HIST1H2BDP58876 126 aa7.72□□□□□ -1.17
LCN2-206ENST00000488391 HIST1H2BCP62807 126 aa7.72□□□□□ -1.17
LCN2-206ENST00000488391 SLAQ13239 276 aa7.72□□□□□ -1.17
LCN2-206ENST00000488391 HIST2H2BEQ16778 126 aa7.72□□□□□ -1.17
LCN2-206ENST00000488391 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.72□□□□□ -1.17
LCN2-206ENST00000488391 FAM104BQ5XKR9 115 aa7.72□□□□□ -1.17
LCN2-206ENST00000488391 ZNF705AQ6ZN79 300 aaPredicted RBP7.72□□□□□ -1.17
LCN2-206ENST00000488391 HIST1H2BHQ93079 126 aa7.72□□□□□ -1.17
LCN2-206ENST00000488391 HIST1H2BNQ99877 126 aa7.72□□□□□ -1.17
LCN2-206ENST00000488391 HIST1H2BMQ99879 126 aa7.72□□□□□ -1.17
LCN2-206ENST00000488391 MDFICQ9P1T7 246 aa7.72□□□□□ -1.17
LCN2-206ENST00000488391 MUC21A0A0G2JKD1 596 aa7.71□□□□□ -1.18
LCN2-206ENST00000488391 MUC21A0A140T8X8 626 aa7.71□□□□□ -1.18
LCN2-206ENST00000488391 SPART-AS1P0CW21 52 aa7.71□□□□□ -1.18
LCN2-206ENST00000488391 HTN3P15516 51 aa7.71□□□□□ -1.18
LCN2-206ENST00000488391 C11orf72Q8NBR9 251 aa7.71□□□□□ -1.18
LCN2-206ENST00000488391 TMEM263Q8WUH6 116 aaKnown RBP7.71□□□□□ -1.18
LCN2-206ENST00000488391 AP1S3Q96PC3 154 aa7.71□□□□□ -1.18
LCN2-206ENST00000488391 MSRB1Q9NZV6 116 aa7.71□□□□□ -1.18
LCN2-206ENST00000488391 TIMM8BQ9Y5J9 83 aaPredicted RBP7.71□□□□□ -1.18
LCN2-206ENST00000488391 SMIM9A6NGZ8 99 aa7.7□□□□□ -1.18
LCN2-206ENST00000488391 M0R2P5 195 aa7.7□□□□□ -1.18
LCN2-206ENST00000488391 M0R381 172 aa7.7□□□□□ -1.18
LCN2-206ENST00000488391 S100A6P06703 90 aa7.7□□□□□ -1.18
LCN2-206ENST00000488391 RNASE8Q8TDE3 154 aaKnown RBP7.7□□□□□ -1.18
LCN2-206ENST00000488391 DPH3P1Q9H4G8 78 aa7.7□□□□□ -1.18
LCN2-206ENST00000488391 PPBPP02775 128 aa7.69□□□□□ -1.18
LCN2-206ENST00000488391 HTN1P15515 57 aa7.69□□□□□ -1.18
LCN2-206ENST00000488391 Q0VG73 95 aa7.69□□□□□ -1.18
LCN2-206ENST00000488391 RRN3P1Q2M238 152 aa7.69□□□□□ -1.18
LCN2-206ENST00000488391 OR10J3Q5JRS4 329 aa7.69□□□□□ -1.18
LCN2-206ENST00000488391 COA6Q5JTJ3 125 aaKnown RBP7.69□□□□□ -1.18
LCN2-206ENST00000488391 C16orf74Q96GX8 76 aa7.69□□□□□ -1.18
LCN2-206ENST00000488391 ALKBH7Q9BT30 221 aaPredicted RBP7.69□□□□□ -1.18
LCN2-206ENST00000488391 IGHV3OR16-12A0A075B7B8 117 aa7.68□□□□□ -1.18
LCN2-206ENST00000488391 RAB4AP20338 218 aa7.68□□□□□ -1.18
LCN2-206ENST00000488391 EVI2AP22794 236 aa7.68□□□□□ -1.18
LCN2-206ENST00000488391 SRIP30626 198 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms