RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 UBE2DNLQ8IWF7 75 aa7.68□□□□□ -1.18
UBE4B-210ENST00000488228 C15orf54Q8N8G6 183 aa7.68□□□□□ -1.18
UBE4B-210ENST00000488228 SLC25A29Q8N8R3 303 aa7.68□□□□□ -1.18
UBE4B-210ENST00000488228 AP1S3Q96PC3 154 aa7.68□□□□□ -1.18
UBE4B-210ENST00000488228 MSRB1Q9NZV6 116 aa7.68□□□□□ -1.18
UBE4B-210ENST00000488228 ICOSQ9Y6W8 199 aa7.68□□□□□ -1.18
UBE4B-210ENST00000488228 V9GYV3 84 aa7.68□□□□□ -1.18
UBE4B-210ENST00000488228 KMT2AQ03164 3969 aa7.68□□□□□ -1.18
UBE4B-210ENST00000488228 A0A1W2PPQ1 181 aa7.67□□□□□ -1.18
UBE4B-210ENST00000488228 H3BNG1 76 aa7.67□□□□□ -1.18
UBE4B-210ENST00000488228 RHODO00212 210 aa7.67□□□□□ -1.18
UBE4B-210ENST00000488228 CRYGDP07320 174 aa7.67□□□□□ -1.18
UBE4B-210ENST00000488228 UQCC3Q6UW78 93 aa7.67□□□□□ -1.18
UBE4B-210ENST00000488228 ZFP2Q6ZN57 461 aa7.67□□□□□ -1.18
UBE4B-210ENST00000488228 C14orf178Q8N769 122 aaPredicted RBP7.67□□□□□ -1.18
UBE4B-210ENST00000488228 PGLYRP4Q96LB8 373 aa7.67□□□□□ -1.18
UBE4B-210ENST00000488228 LINC00862A6NCI5 91 aa7.66□□□□□ -1.18
UBE4B-210ENST00000488228 A8MWL6 223 aa7.66□□□□□ -1.18
UBE4B-210ENST00000488228 F2Z2F3 143 aa7.66□□□□□ -1.18
UBE4B-210ENST00000488228 K7EQD1 137 aa7.66□□□□□ -1.18
UBE4B-210ENST00000488228 P0DMU3 169 aa7.66□□□□□ -1.18
UBE4B-210ENST00000488228 FAM231AP0DMU4 169 aa7.66□□□□□ -1.18
UBE4B-210ENST00000488228 FAM231CP0DMU5 169 aa7.66□□□□□ -1.18
UBE4B-210ENST00000488228 CACNG7P62955 275 aa7.66□□□□□ -1.18
UBE4B-210ENST00000488228 SLAQ13239 276 aa7.66□□□□□ -1.18
UBE4B-210ENST00000488228 RHOHQ15669 191 aa7.66□□□□□ -1.18
UBE4B-210ENST00000488228 ZNF56Q15929 161 aa7.66□□□□□ -1.18
UBE4B-210ENST00000488228 OR10G8Q8NGN5 311 aa7.66□□□□□ -1.18
UBE4B-210ENST00000488228 TSKUQ8WUA8 353 aa7.66□□□□□ -1.18
UBE4B-210ENST00000488228 TRBV6-4A0A1B0GX49 114 aa7.65□□□□□ -1.18
UBE4B-210ENST00000488228 HIGD1CA8MV81 97 aa7.65□□□□□ -1.18
UBE4B-210ENST00000488228 CIDEAO60543 219 aa7.65□□□□□ -1.18
UBE4B-210ENST00000488228 MGPP08493 103 aa7.65□□□□□ -1.18
UBE4B-210ENST00000488228 SRIP30626 198 aa7.65□□□□□ -1.18
UBE4B-210ENST00000488228 CNFNQ9BYD5 112 aa7.65□□□□□ -1.18
UBE4B-210ENST00000488228 Q9UF83 564 aa7.65□□□□□ -1.18
UBE4B-210ENST00000488228 TMEM218A2RU14 115 aa7.64□□□□□ -1.19
UBE4B-210ENST00000488228 F8W036 122 aa7.64□□□□□ -1.19
UBE4B-210ENST00000488228 NTF3P20783 257 aa7.64□□□□□ -1.19
UBE4B-210ENST00000488228 EVI2AP22794 236 aa7.64□□□□□ -1.19
UBE4B-210ENST00000488228 TWIST1Q15672 202 aa7.64□□□□□ -1.19
UBE4B-210ENST00000488228 MRPL23Q16540 153 aaKnown RBP7.64□□□□□ -1.19
UBE4B-210ENST00000488228 PRADC1Q9BSG0 188 aa7.64□□□□□ -1.19
UBE4B-210ENST00000488228 LINC00588Q9Y4M8 146 aa7.64□□□□□ -1.19
UBE4B-210ENST00000488228 KIF25-AS1Q9Y6Z4 181 aa7.64□□□□□ -1.19
UBE4B-210ENST00000488228 GAGE12JA6NER3 117 aa7.63□□□□□ -1.19
UBE4B-210ENST00000488228 F5H697 171 aa7.63□□□□□ -1.19
UBE4B-210ENST00000488228 TRGC1P0CF51 173 aa7.63□□□□□ -1.19
UBE4B-210ENST00000488228 SMIM17P0DL12 118 aa7.63□□□□□ -1.19
UBE4B-210ENST00000488228 LINC00694P0DN24 101 aa7.63□□□□□ -1.19
UBE4B-210ENST00000488228 CCL18P55774 89 aa7.63□□□□□ -1.19
UBE4B-210ENST00000488228 LINC00315P59091 139 aa7.63□□□□□ -1.19
UBE4B-210ENST00000488228 PNRC1Q12796 327 aaPredicted RBP7.63□□□□□ -1.19
UBE4B-210ENST00000488228 GAGE1Q13065 139 aa7.63□□□□□ -1.19
UBE4B-210ENST00000488228 GAGE4Q13068 117 aa7.63□□□□□ -1.19
UBE4B-210ENST00000488228 GAGE5Q13069 117 aa7.63□□□□□ -1.19
UBE4B-210ENST00000488228 ESRGQ1W209 222 aa7.63□□□□□ -1.19
UBE4B-210ENST00000488228 RNF212Q495C1 297 aa7.63□□□□□ -1.19
UBE4B-210ENST00000488228 GAGE13Q4V321 117 aa7.63□□□□□ -1.19
UBE4B-210ENST00000488228 GFRA4Q9GZZ7 299 aa7.63□□□□□ -1.19
UBE4B-210ENST00000488228 NEGR1Q7Z3B1 354 aa7.62□□□□□ -1.19
UBE4B-210ENST00000488228 NUP35Q8NFH5 326 aa7.62□□□□□ -1.19
UBE4B-210ENST00000488228 BORCS7Q96B45 105 aa7.62□□□□□ -1.19
UBE4B-210ENST00000488228 DNAH10Q8IVF4 4471 aa7.62□□□□□ -1.19
UBE4B-210ENST00000488228 DNAH2Q9P225 4427 aa7.62□□□□□ -1.19
UBE4B-210ENST00000488228 IGLV2-18A0A075B6J9 118 aa7.61□□□□□ -1.19
UBE4B-210ENST00000488228 A0A1B0GUT8 65 aa7.61□□□□□ -1.19
UBE4B-210ENST00000488228 SMIM27A0A1W2PRY6 76 aa7.61□□□□□ -1.19
UBE4B-210ENST00000488228 FAM231BA6NCW3 169 aa7.61□□□□□ -1.19
UBE4B-210ENST00000488228 FOXA3P55318 350 aaPredicted RBP7.61□□□□□ -1.19
UBE4B-210ENST00000488228 RAB4BP61018 213 aa7.61□□□□□ -1.19
UBE4B-210ENST00000488228 SUMO4Q6EEV6 95 aa7.61□□□□□ -1.19
UBE4B-210ENST00000488228 WDR73Q6P4I2 378 aa7.61□□□□□ -1.19
UBE4B-210ENST00000488228 SVIPQ8NHG7 77 aa7.61□□□□□ -1.19
UBE4B-210ENST00000488228 SEC11CQ9BY50 192 aa7.61□□□□□ -1.19
UBE4B-210ENST00000488228 DPH3P1Q9H4G8 78 aa7.61□□□□□ -1.19
UBE4B-210ENST00000488228 NAT8BQ9UHF3 227 aa7.61□□□□□ -1.19
UBE4B-210ENST00000488228 MRPS16Q9Y3D3 137 aaKnown RBP7.61□□□□□ -1.19
UBE4B-210ENST00000488228 LYPD5Q6UWN5 251 aa7.6□□□□□ -1.19
UBE4B-210ENST00000488228 NEXN-AS1Q8NBZ9 246 aa7.6□□□□□ -1.19
UBE4B-210ENST00000488228 ZNRF2Q8NHG8 242 aa7.6□□□□□ -1.19
UBE4B-210ENST00000488228 TRAV26-2A0A0B4J265 109 aa7.59□□□□□ -1.19
UBE4B-210ENST00000488228 PPP1R2P9O14990 202 aa7.59□□□□□ -1.19
UBE4B-210ENST00000488228 MT-ND4LP03901 98 aa7.59□□□□□ -1.19
UBE4B-210ENST00000488228 MRPL54Q6P161 138 aaKnown RBP7.59□□□□□ -1.19
UBE4B-210ENST00000488228 CARHSP1Q9Y2V2 147 aaKnown RBP7.59□□□□□ -1.19
UBE4B-210ENST00000488228 FRAS1Q86XX4 4008 aa7.59□□□□□ -1.19
UBE4B-210ENST00000488228 TRBV10-1A0A0K0K1A3 114 aa7.58□□□□□ -1.2
UBE4B-210ENST00000488228 M0QY20 66 aa7.58□□□□□ -1.2
UBE4B-210ENST00000488228 M0R2N4 97 aa7.58□□□□□ -1.2
UBE4B-210ENST00000488228 FAM3BP58499 235 aaPredicted RBP7.58□□□□□ -1.2
UBE4B-210ENST00000488228 RPL36AP83881 106 aaKnown RBP7.58□□□□□ -1.2
UBE4B-210ENST00000488228 RIGQ13278 110 aa7.58□□□□□ -1.2
UBE4B-210ENST00000488228 C10orf91Q5T1B1 145 aa7.58□□□□□ -1.2
UBE4B-210ENST00000488228 SMIM15Q7Z3B0 74 aa7.58□□□□□ -1.2
UBE4B-210ENST00000488228 SH2D6Q7Z4S9 175 aa7.58□□□□□ -1.2
UBE4B-210ENST00000488228 WFDC10BQ8IUB3 73 aa7.58□□□□□ -1.2
UBE4B-210ENST00000488228 ATP6V0E2Q8NHE4 81 aa7.58□□□□□ -1.2
UBE4B-210ENST00000488228 RPL36ALQ969Q0 106 aaKnown RBP7.58□□□□□ -1.2
UBE4B-210ENST00000488228 UPK3BQ9BT76 320 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms