RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 THAP8Q8NA92 274 aa4.42□□□□□ -1.7
TNFSF4-203ENST00000488053 OR1B1Q8NGR6 318 aa4.42□□□□□ -1.7
TNFSF4-203ENST00000488053 IGF2BP2-AS1Q96M15 143 aa4.42□□□□□ -1.7
TNFSF4-203ENST00000488053 TRGV9Q99603 122 aa4.42□□□□□ -1.7
TNFSF4-203ENST00000488053 SLC25A39Q9BZJ4 359 aaPredicted RBP4.42□□□□□ -1.7
TNFSF4-203ENST00000488053 ZNF586Q9NXT0 402 aa4.42□□□□□ -1.7
TNFSF4-203ENST00000488053 H3BP45 60 aa4.41□□□□□ -1.7
TNFSF4-203ENST00000488053 H7BYZ3 331 aa4.41□□□□□ -1.7
TNFSF4-203ENST00000488053 CRXO43186 299 aaPredicted RBP4.41□□□□□ -1.7
TNFSF4-203ENST00000488053 PITX3O75364 302 aa4.41□□□□□ -1.7
TNFSF4-203ENST00000488053 INSP01308 110 aa4.41□□□□□ -1.7
TNFSF4-203ENST00000488053 SRPXP78539 464 aa4.41□□□□□ -1.7
TNFSF4-203ENST00000488053 HIST1H1AQ02539 215 aaPredicted RBP4.41□□□□□ -1.7
TNFSF4-203ENST00000488053 SLAQ13239 276 aa4.41□□□□□ -1.7
TNFSF4-203ENST00000488053 SPANXN5Q5MJ07 72 aa4.41□□□□□ -1.7
TNFSF4-203ENST00000488053 GTF2H5Q6ZYL4 71 aa4.41□□□□□ -1.7
TNFSF4-203ENST00000488053 MAPKAPK5-AS1Q8N8E1 139 aa4.41□□□□□ -1.7
TNFSF4-203ENST00000488053 C15orf53Q8NAA6 179 aa4.41□□□□□ -1.7
TNFSF4-203ENST00000488053 GNPNAT1Q96EK6 184 aaPredicted RBP4.41□□□□□ -1.7
TNFSF4-203ENST00000488053 LINC01587Q99440 93 aa4.41□□□□□ -1.7
TNFSF4-203ENST00000488053 TMEM147Q9BVK8 224 aa4.41□□□□□ -1.7
TNFSF4-203ENST00000488053 WFDC1Q9HC57 220 aa4.41□□□□□ -1.7
TNFSF4-203ENST00000488053 NBDYA0A0U1RRE5 68 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 PRSS46E5RG02 174 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 J3QR89 54 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 SYNGR2O43760 224 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 DUSP14O95147 198 aaKnown RBP4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 PRSS1P07477 247 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 PFN1P07737 140 aaKnown RBP4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 ESDP10768 282 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 ATP5IP56385 69 aaPredicted RBP4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 S100A10P60903 97 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 RHOBP62745 196 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 BAXQ07812 192 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 IL15RAQ13261 267 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 RAB31Q13636 194 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 PMCHL1Q16048 86 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 Q6ZN92 141 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 C6orf223Q8N319 242 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 STPG4Q8N801 248 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 CMTM2Q8TAZ6 248 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 FAM213BQ8TBF2 198 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 SIGMAR1Q99720 223 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 SPXQ9BT56 116 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 SDF2L1Q9HCN8 221 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 SPANXA1Q9NS26 97 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 LINC00588Q9Y4M8 146 aa4.4□□□□□ -1.71
TNFSF4-203ENST00000488053 A0A087WYN8 130 aa4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 TRAV1-1A0A0B4J248 108 aa4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 DUXBA0A1W2PPF3 345 aa4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 PLAC8L1A1L4L8 177 aa4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 LYRM9A8MSI8 78 aa4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 A8MTW9 85 aa4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 H3BRN7 92 aa4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 ATP5G1P05496 136 aa4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 STAG3L2P0CL84 134 aa4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 VPREB1P12018 145 aa4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 S100A7P31151 101 aa4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 ATP5G3P48201 142 aa4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 CCL18P55774 89 aa4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 SPATA45Q537H7 98 aa4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 CYP2G1PQ6ZSU1 146 aa4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 ZNRF2Q8NHG8 242 aa4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 TMEM37Q8WXS4 190 aa4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 SFRP2Q96HF1 295 aa4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 GPR82Q96P67 336 aa4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 SHANK2-AS3Q9BTD1 123 aa4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 NOP10Q9NPE3 64 aaKnown RBP4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 HIGD1AQ9Y241 93 aa4.39□□□□□ -1.71
TNFSF4-203ENST00000488053 TRAV9-1A0A075B6T8 112 aa4.38□□□□□ -1.71
TNFSF4-203ENST00000488053 A0A0J9YY99 117 aa4.38□□□□□ -1.71
TNFSF4-203ENST00000488053 H3BTX0 84 aa4.38□□□□□ -1.71
TNFSF4-203ENST00000488053 SSSCA1O60232 199 aa4.38□□□□□ -1.71
TNFSF4-203ENST00000488053 HYPMO75409 117 aa4.38□□□□□ -1.71
TNFSF4-203ENST00000488053 LINC00869P0C866 280 aa4.38□□□□□ -1.71
TNFSF4-203ENST00000488053 IGLC2P0DOY2 106 aa4.38□□□□□ -1.71
TNFSF4-203ENST00000488053 IGLC3P0DOY3 106 aa4.38□□□□□ -1.71
TNFSF4-203ENST00000488053 CKS1BP61024 79 aa4.38□□□□□ -1.71
TNFSF4-203ENST00000488053 TMEM144Q7Z5S9 345 aa4.38□□□□□ -1.71
TNFSF4-203ENST00000488053 SPATA12Q7Z6I5 190 aa4.38□□□□□ -1.71
TNFSF4-203ENST00000488053 CYB561D1Q8N8Q1 229 aa4.38□□□□□ -1.71
TNFSF4-203ENST00000488053 OR8A1Q8NGG7 326 aa4.38□□□□□ -1.71
TNFSF4-203ENST00000488053 OR2G3Q8NGZ4 309 aa4.38□□□□□ -1.71
TNFSF4-203ENST00000488053 C16orf74Q96GX8 76 aa4.38□□□□□ -1.71
TNFSF4-203ENST00000488053 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
TNFSF4-203ENST00000488053 PSENENQ9NZ42 101 aa4.38□□□□□ -1.71
TNFSF4-203ENST00000488053 TRAPPC1Q9Y5R8 145 aa4.38□□□□□ -1.71
TNFSF4-203ENST00000488053 TRAV26-1A0A087WT03 109 aa4.37□□□□□ -1.71
TNFSF4-203ENST00000488053 PIGBOS1A0A0B4J2F0 54 aa4.37□□□□□ -1.71
TNFSF4-203ENST00000488053 PMS2P5A8MQ11 134 aa4.37□□□□□ -1.71
TNFSF4-203ENST00000488053 CDK2AP2O75956 126 aa4.37□□□□□ -1.71
TNFSF4-203ENST00000488053 SLC25A6P12236 298 aa4.37□□□□□ -1.71
TNFSF4-203ENST00000488053 RPL7P18124 248 aaKnown RBP4.37□□□□□ -1.71
TNFSF4-203ENST00000488053 TSPOP30536 169 aa4.37□□□□□ -1.71
TNFSF4-203ENST00000488053 CTRLP40313 264 aa4.37□□□□□ -1.71
TNFSF4-203ENST00000488053 SLC38A11Q08AI6 406 aa4.37□□□□□ -1.71
TNFSF4-203ENST00000488053 IAH1Q2TAA2 248 aaPredicted RBP4.37□□□□□ -1.71
TNFSF4-203ENST00000488053 COX19Q49B96 90 aa4.37□□□□□ -1.71
TNFSF4-203ENST00000488053 PATE2Q6UY27 113 aa4.37□□□□□ -1.71
TNFSF4-203ENST00000488053 S100A7AQ86SG5 101 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms