RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 PLAC8L1A1L4L8 177 aa7.58□□□□□ -1.2
HLA-DMB-261ENST00000487996 COLCA2A8K830 154 aa7.58□□□□□ -1.2
HLA-DMB-261ENST00000487996 RAB5AP20339 215 aa7.58□□□□□ -1.2
HLA-DMB-261ENST00000487996 EMP1P54849 157 aa7.58□□□□□ -1.2
HLA-DMB-261ENST00000487996 TMEM191AQ9H0A3 160 aa7.58□□□□□ -1.2
HLA-DMB-261ENST00000487996 C11orf68Q9H3H3 251 aaKnown RBP7.58□□□□□ -1.2
HLA-DMB-261ENST00000487996 RHODO00212 210 aa7.58□□□□□ -1.2
HLA-DMB-261ENST00000487996 CIDEAO60543 219 aa7.58□□□□□ -1.2
HLA-DMB-261ENST00000487996 NHLRC4P0CG21 123 aaPredicted RBP7.58□□□□□ -1.2
HLA-DMB-261ENST00000487996 GATD1Q8NB37 220 aa7.58□□□□□ -1.2
HLA-DMB-261ENST00000487996 DPH3P1Q9H4G8 78 aa7.58□□□□□ -1.2
HLA-DMB-261ENST00000487996 RETNQ9HD89 108 aa7.58□□□□□ -1.2
HLA-DMB-261ENST00000487996 MRPL16Q9NX20 251 aaKnown RBP7.58□□□□□ -1.2
HLA-DMB-261ENST00000487996 SPART-AS1P0CW21 52 aa7.57□□□□□ -1.2
HLA-DMB-261ENST00000487996 RPS10P46783 165 aaKnown RBP7.57□□□□□ -1.2
HLA-DMB-261ENST00000487996 MSRB1Q9NZV6 116 aa7.57□□□□□ -1.2
HLA-DMB-261ENST00000487996 TRGV2A0A075B6R0 118 aa7.56□□□□□ -1.2
HLA-DMB-261ENST00000487996 EVI2AP22794 236 aa7.56□□□□□ -1.2
HLA-DMB-261ENST00000487996 TMEM136Q6ZRR5 245 aa7.56□□□□□ -1.2
HLA-DMB-261ENST00000487996 Q6ZTI0 123 aa7.56□□□□□ -1.2
HLA-DMB-261ENST00000487996 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.56□□□□□ -1.2
HLA-DMB-261ENST00000487996 FRZBQ92765 325 aa7.56□□□□□ -1.2
HLA-DMB-261ENST00000487996 C18orf15Q96N68 181 aa7.56□□□□□ -1.2
HLA-DMB-261ENST00000487996 DKK2Q9UBU2 259 aa7.56□□□□□ -1.2
HLA-DMB-261ENST00000487996 TRAPPC1Q9Y5R8 145 aa7.56□□□□□ -1.2
HLA-DMB-261ENST00000487996 TRAV4A0A0B4J268 109 aa7.55□□□□□ -1.2
HLA-DMB-261ENST00000487996 A6NJY4 79 aa7.55□□□□□ -1.2
HLA-DMB-261ENST00000487996 FAM222AQ5U5X8 452 aa7.55□□□□□ -1.2
HLA-DMB-261ENST00000487996 ZFP2Q6ZN57 461 aa7.55□□□□□ -1.2
HLA-DMB-261ENST00000487996 PRKDCP78527 4128 aaKnown RBP7.55□□□□□ -1.2
HLA-DMB-261ENST00000487996 TGP01266 2768 aa7.55□□□□□ -1.2
HLA-DMB-261ENST00000487996 GAGE12BA1L429 117 aa7.55□□□□□ -1.2
HLA-DMB-261ENST00000487996 RS1O15537 224 aa7.55□□□□□ -1.2
HLA-DMB-261ENST00000487996 GAGE7O76087 117 aa7.55□□□□□ -1.2
HLA-DMB-261ENST00000487996 APCSP02743 223 aa7.55□□□□□ -1.2
HLA-DMB-261ENST00000487996 GAGE12FP0CL80 117 aa7.55□□□□□ -1.2
HLA-DMB-261ENST00000487996 GAGE12GP0CL81 117 aa7.55□□□□□ -1.2
HLA-DMB-261ENST00000487996 GAGE12IP0CL82 117 aa7.55□□□□□ -1.2
HLA-DMB-261ENST00000487996 FAM74A4Q5TZK3 123 aa7.55□□□□□ -1.2
HLA-DMB-261ENST00000487996 FAM104BQ5XKR9 115 aa7.55□□□□□ -1.2
HLA-DMB-261ENST00000487996 LINC00612Q8N6U2 182 aa7.55□□□□□ -1.2
HLA-DMB-261ENST00000487996 C14orf178Q8N769 122 aaPredicted RBP7.55□□□□□ -1.2
HLA-DMB-261ENST00000487996 OR4C5Q8NGB2 326 aa7.55□□□□□ -1.2
HLA-DMB-261ENST00000487996 DEFB4AO15263 64 aa7.54□□□□□ -1.2
HLA-DMB-261ENST00000487996 PPBPP02775 128 aa7.54□□□□□ -1.2
HLA-DMB-261ENST00000487996 DEFB130BP0DP73 79 aa7.54□□□□□ -1.2
HLA-DMB-261ENST00000487996 DEFB130AP0DP74 79 aa7.54□□□□□ -1.2
HLA-DMB-261ENST00000487996 DAD1P61803 113 aa7.54□□□□□ -1.2
HLA-DMB-261ENST00000487996 CFAP126Q5VTH2 177 aa7.54□□□□□ -1.2
HLA-DMB-261ENST00000487996 MRPL18Q9H0U6 180 aaKnown RBP7.54□□□□□ -1.2
HLA-DMB-261ENST00000487996 A0A087WWL8 130 aa7.53□□□□□ -1.2
HLA-DMB-261ENST00000487996 F5H697 171 aa7.53□□□□□ -1.2
HLA-DMB-261ENST00000487996 H7C1H1 209 aa7.53□□□□□ -1.2
HLA-DMB-261ENST00000487996 CRYGDP07320 174 aa7.53□□□□□ -1.2
HLA-DMB-261ENST00000487996 MGPP08493 103 aa7.53□□□□□ -1.2
HLA-DMB-261ENST00000487996 FABP9Q0Z7S8 132 aa7.53□□□□□ -1.2
HLA-DMB-261ENST00000487996 ZNF56Q15929 161 aa7.53□□□□□ -1.2
HLA-DMB-261ENST00000487996 AMN1Q8IY45 258 aa7.53□□□□□ -1.2
HLA-DMB-261ENST00000487996 MRAP2Q96G30 205 aa7.53□□□□□ -1.2
HLA-DMB-261ENST00000487996 CBY1Q9Y3M2 126 aa7.53□□□□□ -1.2
HLA-DMB-261ENST00000487996 PPP1R17O96001 155 aa7.52□□□□□ -1.2
HLA-DMB-261ENST00000487996 RAB4AP20338 218 aa7.52□□□□□ -1.2
HLA-DMB-261ENST00000487996 SLAQ13239 276 aa7.52□□□□□ -1.2
HLA-DMB-261ENST00000487996 JPT2Q9H910 190 aa7.52□□□□□ -1.2
HLA-DMB-261ENST00000487996 KIF25-AS1Q9Y6Z4 181 aa7.52□□□□□ -1.2
HLA-DMB-261ENST00000487996 A0A0J9YWU9 116 aa7.52□□□□□ -1.21
HLA-DMB-261ENST00000487996 TRGC2P03986 189 aa7.52□□□□□ -1.21
HLA-DMB-261ENST00000487996 CKS2P33552 79 aa7.52□□□□□ -1.21
HLA-DMB-261ENST00000487996 ORMDL3Q8N138 153 aa7.52□□□□□ -1.21
HLA-DMB-261ENST00000487996 POM121L12Q8N7R1 296 aa7.52□□□□□ -1.21
HLA-DMB-261ENST00000487996 LAMTOR2Q9Y2Q5 125 aa7.52□□□□□ -1.21
HLA-DMB-261ENST00000487996 NACAE9PAV3 2078 aa7.52□□□□□ -1.21
HLA-DMB-261ENST00000487996 ATP5G1P05496 136 aa7.51□□□□□ -1.21
HLA-DMB-261ENST00000487996 MRPL51Q4U2R6 128 aaKnown RBP7.51□□□□□ -1.21
HLA-DMB-261ENST00000487996 UFSP1Q6NVU6 142 aa7.51□□□□□ -1.21
HLA-DMB-261ENST00000487996 C11orf45Q8TAV5 145 aa7.51□□□□□ -1.21
HLA-DMB-261ENST00000487996 RNF185Q96GF1 192 aa7.51□□□□□ -1.21
HLA-DMB-261ENST00000487996 SAMD10Q9BYL1 202 aa7.51□□□□□ -1.21
HLA-DMB-261ENST00000487996 TENM3Q9P273 2699 aa7.5□□□□□ -1.21
HLA-DMB-261ENST00000487996 TRGV4A0A0C4DH28 118 aa7.5□□□□□ -1.21
HLA-DMB-261ENST00000487996 C1orf196B1AJZ1 125 aa7.5□□□□□ -1.21
HLA-DMB-261ENST00000487996 LINC00315P59091 139 aa7.5□□□□□ -1.21
HLA-DMB-261ENST00000487996 ZNF479Q96JC4 524 aa7.5□□□□□ -1.21
HLA-DMB-261ENST00000487996 EDA2RQ9HAV5 297 aa7.5□□□□□ -1.21
HLA-DMB-261ENST00000487996 CELA1Q9UNI1 258 aa7.5□□□□□ -1.21
HLA-DMB-261ENST00000487996 D6R8Y8 96 aa7.49□□□□□ -1.21
HLA-DMB-261ENST00000487996 IGHV3-53P01767 116 aa7.49□□□□□ -1.21
HLA-DMB-261ENST00000487996 IGHV3-73A0A0B4J1V6 119 aa7.49□□□□□ -1.21
HLA-DMB-261ENST00000487996 TRBV10-1A0A0K0K1A3 114 aa7.49□□□□□ -1.21
HLA-DMB-261ENST00000487996 TRBV6-4A0A1B0GX49 114 aa7.49□□□□□ -1.21
HLA-DMB-261ENST00000487996 PHOX2AO14813 284 aa7.49□□□□□ -1.21
HLA-DMB-261ENST00000487996 RAB5BP61020 215 aa7.49□□□□□ -1.21
HLA-DMB-261ENST00000487996 SUMO4Q6EEV6 95 aa7.49□□□□□ -1.21
HLA-DMB-261ENST00000487996 PRELID3AQ96N28 172 aa7.49□□□□□ -1.21
HLA-DMB-261ENST00000487996 U3KQK5 164 aa7.49□□□□□ -1.21
HLA-DMB-261ENST00000487996 GATA1P15976 413 aaPredicted RBP7.48□□□□□ -1.21
HLA-DMB-261ENST00000487996 SRIP30626 198 aa7.48□□□□□ -1.21
HLA-DMB-261ENST00000487996 RHOHQ15669 191 aa7.48□□□□□ -1.21
HLA-DMB-261ENST00000487996 C12orf74Q32Q52 190 aa7.48□□□□□ -1.21
HLA-DMB-261ENST00000487996 KIAA1644Q3SXP7 199 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms