RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 C20orf173Q96LM9 149 aa8.96□□□□□ -0.97
TRA2B-214ENST00000487615 F8W735 103 aaPredicted RBP8.96□□□□□ -0.98
TRA2B-214ENST00000487615 ODF1Q14990 250 aa8.95□□□□□ -0.98
TRA2B-214ENST00000487615 XIRP2A4UGR9 3374 aa8.95□□□□□ -0.98
TRA2B-214ENST00000487615 TRBV25-1A0A075B6N4 114 aa8.95□□□□□ -0.98
TRA2B-214ENST00000487615 A0A0U1RRA0 63 aa8.95□□□□□ -0.98
TRA2B-214ENST00000487615 ZFYVE26Q68DK2 2539 aa8.95□□□□□ -0.98
TRA2B-214ENST00000487615 HTN3P15516 51 aa8.95□□□□□ -0.98
TRA2B-214ENST00000487615 MORN3Q6PF18 240 aaPredicted RBP8.95□□□□□ -0.98
TRA2B-214ENST00000487615 APRG1Q8IVJ8 170 aa8.95□□□□□ -0.98
TRA2B-214ENST00000487615 CEND1Q8N111 149 aa8.95□□□□□ -0.98
TRA2B-214ENST00000487615 TSSC4Q9Y5U2 329 aaPredicted RBP8.95□□□□□ -0.98
TRA2B-214ENST00000487615 ZFP2Q6ZN57 461 aa8.95□□□□□ -0.98
TRA2B-214ENST00000487615 ZFAND2AQ8N6M9 145 aa8.95□□□□□ -0.98
TRA2B-214ENST00000487615 TRAV13-1A0A0B4J241 112 aa8.94□□□□□ -0.98
TRA2B-214ENST00000487615 CLPSL1A2RUU4 121 aa8.94□□□□□ -0.98
TRA2B-214ENST00000487615 ZNRF2Q8NHG8 242 aa8.94□□□□□ -0.98
TRA2B-214ENST00000487615 IGHV3-38A0A0C4DH36 116 aa8.94□□□□□ -0.98
TRA2B-214ENST00000487615 BOD1L2Q8IYS8 172 aa8.94□□□□□ -0.98
TRA2B-214ENST00000487615 IGHV4-31P0DP07 118 aa8.94□□□□□ -0.98
TRA2B-214ENST00000487615 RIPPLY3P57055 190 aa8.94□□□□□ -0.98
TRA2B-214ENST00000487615 RNF152Q8N8N0 203 aa8.94□□□□□ -0.98
TRA2B-214ENST00000487615 RASL10AQ92737 203 aa8.94□□□□□ -0.98
TRA2B-214ENST00000487615 PKD1L2Q7Z442 2459 aa8.94□□□□□ -0.98
TRA2B-214ENST00000487615 ABCA2Q9BZC7 2435 aa8.94□□□□□ -0.98
TRA2B-214ENST00000487615 Q6YL49 198 aa8.93□□□□□ -0.98
TRA2B-214ENST00000487615 GATD1Q8NB37 220 aa8.93□□□□□ -0.98
TRA2B-214ENST00000487615 DLX4Q92988 240 aaPredicted RBP8.93□□□□□ -0.98
TRA2B-214ENST00000487615 U3KQK5 164 aa8.93□□□□□ -0.98
TRA2B-214ENST00000487615 GAGE12JA6NER3 117 aa8.93□□□□□ -0.98
TRA2B-214ENST00000487615 GAGE4Q13068 117 aa8.93□□□□□ -0.98
TRA2B-214ENST00000487615 GAGE5Q13069 117 aa8.93□□□□□ -0.98
TRA2B-214ENST00000487615 TMEM61Q8N0U2 210 aa8.93□□□□□ -0.98
TRA2B-214ENST00000487615 LRRC75A-AS1Q8N1F1 130 aa8.93□□□□□ -0.98
TRA2B-214ENST00000487615 OR13C6PQ8NH95 151 aa8.93□□□□□ -0.98
TRA2B-214ENST00000487615 TRAV12-1A0A0B4J245 112 aa8.93□□□□□ -0.98
TRA2B-214ENST00000487615 J3QQQ9 107 aa8.93□□□□□ -0.98
TRA2B-214ENST00000487615 K7EQG2 157 aa8.92□□□□□ -0.98
TRA2B-214ENST00000487615 DEFB130BP0DP73 79 aa8.92□□□□□ -0.98
TRA2B-214ENST00000487615 DEFB130AP0DP74 79 aa8.92□□□□□ -0.98
TRA2B-214ENST00000487615 TOMM6Q96B49 74 aa8.92□□□□□ -0.98
TRA2B-214ENST00000487615 TTTY13Q9BZ97 58 aa8.92□□□□□ -0.98
TRA2B-214ENST00000487615 CST9LQ9H4G1 147 aa8.92□□□□□ -0.98
TRA2B-214ENST00000487615 RNF185Q96GF1 192 aa8.92□□□□□ -0.98
TRA2B-214ENST00000487615 MDFICQ9P1T7 246 aa8.92□□□□□ -0.98
TRA2B-214ENST00000487615 U3KQE9 123 aa8.92□□□□□ -0.98
TRA2B-214ENST00000487615 A0A1W2PPM0 123 aa8.92□□□□□ -0.98
TRA2B-214ENST00000487615 DNAL4O96015 105 aa8.92□□□□□ -0.98
TRA2B-214ENST00000487615 JPT2Q9H910 190 aa8.92□□□□□ -0.98
TRA2B-214ENST00000487615 PRRC2AP48634 2157 aaKnown RBP8.92□□□□□ -0.98
TRA2B-214ENST00000487615 GAGE7O76087 117 aa8.92□□□□□ -0.98
TRA2B-214ENST00000487615 GAGE12FP0CL80 117 aa8.92□□□□□ -0.98
TRA2B-214ENST00000487615 GAGE12GP0CL81 117 aa8.92□□□□□ -0.98
TRA2B-214ENST00000487615 GAGE12IP0CL82 117 aa8.92□□□□□ -0.98
TRA2B-214ENST00000487615 NPC2P61916 151 aa8.92□□□□□ -0.98
TRA2B-214ENST00000487615 CFHR3Q02985 330 aa8.92□□□□□ -0.98
TRA2B-214ENST00000487615 Q6ZS46 218 aa8.92□□□□□ -0.98
TRA2B-214ENST00000487615 C4orf3Q8WVX3 66 aa8.92□□□□□ -0.98
TRA2B-214ENST00000487615 K7EP34 96 aa8.91□□□□□ -0.98
TRA2B-214ENST00000487615 LGALS9O00182 355 aa8.91□□□□□ -0.98
TRA2B-214ENST00000487615 PSMB8P28062 276 aa8.91□□□□□ -0.98
TRA2B-214ENST00000487615 C10orf99Q6UWK7 81 aa8.91□□□□□ -0.98
TRA2B-214ENST00000487615 ODF3Q96PU9 254 aa8.91□□□□□ -0.98
TRA2B-214ENST00000487615 SETD2Q9BYW2 2564 aaPredicted RBP8.91□□□□□ -0.98
TRA2B-214ENST00000487615 K7ERJ3 54 aa8.91□□□□□ -0.98
TRA2B-214ENST00000487615 C11orf21Q9P2W6 132 aa8.91□□□□□ -0.98
TRA2B-214ENST00000487615 IGLV1-40P01703 118 aa8.91□□□□□ -0.98
TRA2B-214ENST00000487615 LAMA1P25391 3075 aa8.91□□□□□ -0.98
TRA2B-214ENST00000487615 RPL39P62891 51 aaKnown RBP8.9□□□□□ -0.98
TRA2B-214ENST00000487615 TMEM86BQ8N661 226 aa8.9□□□□□ -0.98
TRA2B-214ENST00000487615 AVPP01185 164 aa8.9□□□□□ -0.98
TRA2B-214ENST00000487615 ADAMTSL5Q6ZMM2 481 aa8.9□□□□□ -0.98
TRA2B-214ENST00000487615 Q71RC1 249 aaPredicted RBP8.9□□□□□ -0.98
TRA2B-214ENST00000487615 BAALCQ8WXS3 180 aa8.9□□□□□ -0.98
TRA2B-214ENST00000487615 HIGD1BQ9P298 99 aa8.9□□□□□ -0.98
TRA2B-214ENST00000487615 ABCA12Q86UK0 2595 aa8.9□□□□□ -0.98
TRA2B-214ENST00000487615 OCIAD2Q56VL3 154 aa8.9□□□□□ -0.99
TRA2B-214ENST00000487615 ZNF462Q96JM2 2506 aa8.9□□□□□ -0.99
TRA2B-214ENST00000487615 CRIP2P52943 208 aaPredicted RBP8.9□□□□□ -0.99
TRA2B-214ENST00000487615 PRIMA1Q86XR5 153 aa8.9□□□□□ -0.99
TRA2B-214ENST00000487615 ZNF843Q8N446 348 aa8.9□□□□□ -0.99
TRA2B-214ENST00000487615 CNFNQ9BYD5 112 aa8.9□□□□□ -0.99
TRA2B-214ENST00000487615 CCL25O15444 150 aa8.89□□□□□ -0.99
TRA2B-214ENST00000487615 DOPEY1Q5JWR5 2465 aa8.89□□□□□ -0.99
TRA2B-214ENST00000487615 C12orf74Q32Q52 190 aa8.89□□□□□ -0.99
TRA2B-214ENST00000487615 CFAP161Q6P656 301 aa8.89□□□□□ -0.99
TRA2B-214ENST00000487615 URB1-AS1Q96HZ7 61 aa8.89□□□□□ -0.99
TRA2B-214ENST00000487615 TIMM17AQ99595 171 aa8.89□□□□□ -0.99
TRA2B-214ENST00000487615 TAX1BP3O14907 124 aa8.89□□□□□ -0.99
TRA2B-214ENST00000487615 RNASE13Q5GAN3 156 aaKnown RBP8.89□□□□□ -0.99
TRA2B-214ENST00000487615 NDUFA12Q9UI09 145 aa8.89□□□□□ -0.99
TRA2B-214ENST00000487615 TRAV25A0A0B4J276 109 aa8.88□□□□□ -0.99
TRA2B-214ENST00000487615 PRR9Q5T870 116 aa8.88□□□□□ -0.99
TRA2B-214ENST00000487615 K7EP13 123 aa8.88□□□□□ -0.99
TRA2B-214ENST00000487615 TMEM243Q9BU79 118 aa8.88□□□□□ -0.99
TRA2B-214ENST00000487615 COL27A1Q8IZC6 1860 aaPredicted RBP8.88□□□□□ -0.99
TRA2B-214ENST00000487615 COX8CQ7Z4L0 72 aa8.88□□□□□ -0.99
TRA2B-214ENST00000487615 Q8N976 141 aa8.88□□□□□ -0.99
TRA2B-214ENST00000487615 TP73-AS1Q9UF72 201 aa8.88□□□□□ -0.99
TRA2B-214ENST00000487615 LINC00158P58513 81 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms