RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 LINC00526Q96FQ7 95 aa2.38□□□□□ -2.03
CNN3-206ENST00000487539 SLC50A1Q9BRV3 221 aa2.38□□□□□ -2.03
CNN3-206ENST00000487539 ARL6Q9H0F7 186 aa2.38□□□□□ -2.03
CNN3-206ENST00000487539 DIABLOQ9NR28 239 aa2.38□□□□□ -2.03
CNN3-206ENST00000487539 NAGKQ9UJ70 344 aa2.38□□□□□ -2.03
CNN3-206ENST00000487539 PAIP2BQ9ULR5 123 aaKnown RBP2.38□□□□□ -2.03
CNN3-206ENST00000487539 U3KQ87 197 aa2.38□□□□□ -2.03
CNN3-206ENST00000487539 A0A087WWC5 75 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 TRAV1-2A0A0B4J238 106 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 PDCD5O14737 125 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 GYG2O15488 501 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 TNFAIP8O95379 198 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 CFDP00746 253 aaPredicted RBP2.37□□□□□ -2.03
CNN3-206ENST00000487539 IL5P05113 134 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 GNAO1P09471 354 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 SEC11BP0C7V7 166 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 LINC00869P0C866 280 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 CXCL2P19875 107 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 RPL13AP40429 203 aaKnown RBP2.37□□□□□ -2.03
CNN3-206ENST00000487539 PLP1P60201 277 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 RND3P61587 244 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 GNGT1P63211 74 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 RAB31Q13636 194 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 MIAQ16674 131 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 UFSP1Q6NVU6 142 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 LPCAT3Q6P1A2 487 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 LINC00173Q6ZV60 143 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 LINC00305Q7Z4B0 112 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 ZNF546Q86UE3 836 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 GLYATL2Q8WU03 294 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 RAB2BQ8WUD1 216 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 SRRQ9GZT4 340 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 ARV1Q9H2C2 271 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 IFT46Q9NQC8 304 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 NDUFA13Q9P0J0 144 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 ZNF492Q9P255 531 aa2.37□□□□□ -2.03
CNN3-206ENST00000487539 MDN1Q9NU22 5596 aa2.36□□□□□ -2.03
CNN3-206ENST00000487539 ZNF861PO60384 105 aa2.36□□□□□ -2.03
CNN3-206ENST00000487539 CDS2O95674 445 aa2.36□□□□□ -2.03
CNN3-206ENST00000487539 CAV2P51636 162 aa2.36□□□□□ -2.03
CNN3-206ENST00000487539 ZNF266Q14584 549 aa2.36□□□□□ -2.03
CNN3-206ENST00000487539 KRTAP13-2Q52LG2 175 aa2.36□□□□□ -2.03
CNN3-206ENST00000487539 GPR107Q5VW38 600 aa2.36□□□□□ -2.03
CNN3-206ENST00000487539 C22orf42Q6IC83 251 aa2.36□□□□□ -2.03
CNN3-206ENST00000487539 IZUMO2Q6UXV1 221 aa2.36□□□□□ -2.03
CNN3-206ENST00000487539 OR13C8Q8NGS7 320 aa2.36□□□□□ -2.03
CNN3-206ENST00000487539 CHCHD7Q9BUK0 85 aa2.36□□□□□ -2.03
CNN3-206ENST00000487539 MND1Q9BWT6 205 aa2.36□□□□□ -2.03
CNN3-206ENST00000487539 C8orf4Q9NR00 106 aa2.36□□□□□ -2.03
CNN3-206ENST00000487539 PXMP4Q9Y6I8 212 aa2.36□□□□□ -2.03
CNN3-206ENST00000487539 E9PLD3 99 aa2.35□□□□□ -2.03
CNN3-206ENST00000487539 NMBP08949 121 aa2.35□□□□□ -2.03
CNN3-206ENST00000487539 MGST1P10620 155 aaKnown RBP2.35□□□□□ -2.03
CNN3-206ENST00000487539 S100GP29377 79 aa2.35□□□□□ -2.03
CNN3-206ENST00000487539 TAS2R46P59540 309 aa2.35□□□□□ -2.03
CNN3-206ENST00000487539 RBX1P62877 108 aa2.35□□□□□ -2.03
CNN3-206ENST00000487539 AKR1C1Q04828 323 aa2.35□□□□□ -2.03
CNN3-206ENST00000487539 C9orf116Q5BN46 136 aaPredicted RBP2.35□□□□□ -2.03
CNN3-206ENST00000487539 C1orf146Q5VVC0 180 aa2.35□□□□□ -2.03
CNN3-206ENST00000487539 Q6AWC8 147 aa2.35□□□□□ -2.03
CNN3-206ENST00000487539 KCNIP4Q6PIL6 250 aa2.35□□□□□ -2.03
CNN3-206ENST00000487539 FAM159AQ6UWV7 190 aa2.35□□□□□ -2.03
CNN3-206ENST00000487539 LINC00337Q8N6G1 96 aa2.35□□□□□ -2.03
CNN3-206ENST00000487539 Q8N9L7 120 aa2.35□□□□□ -2.03
CNN3-206ENST00000487539 OR2G3Q8NGZ4 309 aa2.35□□□□□ -2.03
CNN3-206ENST00000487539 CARHSP1Q9Y2V2 147 aaKnown RBP2.35□□□□□ -2.03
CNN3-206ENST00000487539 TRBV19A0A075B6N1 114 aa2.34□□□□□ -2.03
CNN3-206ENST00000487539 TRBV6-8A0A0A6YYG3 113 aa2.34□□□□□ -2.03
CNN3-206ENST00000487539 SMCO3A2RU48 225 aa2.34□□□□□ -2.03
CNN3-206ENST00000487539 ERICH4A6NGS2 130 aa2.34□□□□□ -2.03
CNN3-206ENST00000487539 B3GALNT1O75752 331 aa2.34□□□□□ -2.03
CNN3-206ENST00000487539 SULT1A3P0DMM9 295 aa2.34□□□□□ -2.03
CNN3-206ENST00000487539 SULT1A4P0DMN0 295 aa2.34□□□□□ -2.03
CNN3-206ENST00000487539 PYYP10082 97 aa2.34□□□□□ -2.03
CNN3-206ENST00000487539 RCVRNP35243 200 aa2.34□□□□□ -2.03
CNN3-206ENST00000487539 REG3AQ06141 175 aa2.34□□□□□ -2.03
CNN3-206ENST00000487539 SLC38A11Q08AI6 406 aa2.34□□□□□ -2.03
CNN3-206ENST00000487539 KRTAP19-6Q3LI70 58 aa2.34□□□□□ -2.03
CNN3-206ENST00000487539 TMEM78Q5T7P6 136 aa2.34□□□□□ -2.03
CNN3-206ENST00000487539 NTM-AS1Q6ZSK4 140 aa2.34□□□□□ -2.03
CNN3-206ENST00000487539 LYZL2Q7Z4W2 148 aa2.34□□□□□ -2.03
CNN3-206ENST00000487539 LHFPL1Q86WI0 220 aa2.34□□□□□ -2.03
CNN3-206ENST00000487539 BPIFA4PQ86YQ2 179 aa2.34□□□□□ -2.03
CNN3-206ENST00000487539 KCNS1Q96KK3 526 aa2.34□□□□□ -2.03
CNN3-206ENST00000487539 RTBDNQ9BSG5 229 aaPredicted RBP2.34□□□□□ -2.03
CNN3-206ENST00000487539 NAA50Q9GZZ1 169 aaKnown RBP2.34□□□□□ -2.03
CNN3-206ENST00000487539 ACOT13Q9NPJ3 140 aa2.34□□□□□ -2.03
CNN3-206ENST00000487539 IGLV4-60A0A075B6I1 120 aa2.33□□□□□ -2.04
CNN3-206ENST00000487539 TRDV1A0A1B0GX56 115 aa2.33□□□□□ -2.04
CNN3-206ENST00000487539 F6UZH7 168 aa2.33□□□□□ -2.04
CNN3-206ENST00000487539 H3BP45 60 aa2.33□□□□□ -2.04
CNN3-206ENST00000487539 AGPAT2O15120 278 aa2.33□□□□□ -2.04
CNN3-206ENST00000487539 EIF3GO75821 320 aaKnown RBP eCLIP2.33□□□□□ -2.04
CNN3-206ENST00000487539 SCGNO76038 276 aa2.33□□□□□ -2.04
CNN3-206ENST00000487539 KRTAP2-3P0C7H8 128 aa2.33□□□□□ -2.04
CNN3-206ENST00000487539 MYL9P24844 172 aa2.33□□□□□ -2.04
CNN3-206ENST00000487539 RANBP1P43487 201 aa2.33□□□□□ -2.04
CNN3-206ENST00000487539 UBE2D3P61077 147 aa2.33□□□□□ -2.04
CNN3-206ENST00000487539 RRAS2P62070 204 aaPredicted RBP2.33□□□□□ -2.04
CNN3-206ENST00000487539 UBE2D2P62837 147 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms