RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 GCHFRP30047 84 aa9.75□□□□□ -0.85
MCF2L-228ENST00000487354 CRIP1P50238 77 aa9.75□□□□□ -0.85
MCF2L-228ENST00000487354 SFRP2Q96HF1 295 aa9.75□□□□□ -0.85
MCF2L-228ENST00000487354 CCDC32Q9BV29 185 aa9.75□□□□□ -0.85
MCF2L-228ENST00000487354 ARL2-SNX15V9GYD0 113 aa9.75□□□□□ -0.85
MCF2L-228ENST00000487354 TRBV6-8A0A0A6YYG3 113 aa9.74□□□□□ -0.85
MCF2L-228ENST00000487354 TRAV34A0A0B4J273 112 aa9.74□□□□□ -0.85
MCF2L-228ENST00000487354 TRBV10-1A0A0K0K1A3 114 aa9.74□□□□□ -0.85
MCF2L-228ENST00000487354 ARMS2P0C7Q2 107 aa9.74□□□□□ -0.85
MCF2L-228ENST00000487354 RPL12P30050 165 aaKnown RBP9.74□□□□□ -0.85
MCF2L-228ENST00000487354 CDC34P49427 236 aaPredicted RBP9.74□□□□□ -0.85
MCF2L-228ENST00000487354 SUMO1P63165 101 aaKnown RBP9.74□□□□□ -0.85
MCF2L-228ENST00000487354 OR10G8Q8NGN5 311 aa9.74□□□□□ -0.85
MCF2L-228ENST00000487354 TRBV7-3A0A075B6L6 115 aa9.73□□□□□ -0.85
MCF2L-228ENST00000487354 KRBOX1C9JBD0 128 aa9.73□□□□□ -0.85
MCF2L-228ENST00000487354 K7EQM0 130 aa9.73□□□□□ -0.85
MCF2L-228ENST00000487354 CRPP02741 224 aa9.73□□□□□ -0.85
MCF2L-228ENST00000487354 RPL19P84098 196 aaKnown RBP9.73□□□□□ -0.85
MCF2L-228ENST00000487354 CYCSP99999 105 aaKnown RBP9.73□□□□□ -0.85
MCF2L-228ENST00000487354 SAPCD1Q5SSQ6 148 aa9.73□□□□□ -0.85
MCF2L-228ENST00000487354 RAB24Q969Q5 203 aa9.73□□□□□ -0.85
MCF2L-228ENST00000487354 ZC2HC1AQ96GY0 325 aa9.73□□□□□ -0.85
MCF2L-228ENST00000487354 PRR34Q9NV39 138 aa9.73□□□□□ -0.85
MCF2L-228ENST00000487354 A0A0D9SG52 128 aa9.72□□□□□ -0.85
MCF2L-228ENST00000487354 FABP5P3A8MUU1 101 aa9.72□□□□□ -0.85
MCF2L-228ENST00000487354 B4DEV8 164 aa9.72□□□□□ -0.85
MCF2L-228ENST00000487354 ANGP03950 147 aaKnown RBP9.72□□□□□ -0.85
MCF2L-228ENST00000487354 MIAQ16674 131 aa9.72□□□□□ -0.85
MCF2L-228ENST00000487354 KCNIP4Q6PIL6 250 aa9.72□□□□□ -0.85
MCF2L-228ENST00000487354 Q86TA4 180 aa9.72□□□□□ -0.85
MCF2L-228ENST00000487354 OR11H4Q8NGC9 324 aa9.72□□□□□ -0.85
MCF2L-228ENST00000487354 GRIFINA4D1Z8 144 aa9.71□□□□□ -0.86
MCF2L-228ENST00000487354 TMEM262E9PQX1 116 aa9.71□□□□□ -0.86
MCF2L-228ENST00000487354 M0R036 132 aa9.71□□□□□ -0.86
MCF2L-228ENST00000487354 SLPIP03973 132 aa9.71□□□□□ -0.86
MCF2L-228ENST00000487354 CHTF8P0CG12 524 aa9.71□□□□□ -0.86
MCF2L-228ENST00000487354 CNBPP62633 177 aaKnown RBP9.71□□□□□ -0.86
MCF2L-228ENST00000487354 RPL36AP83881 106 aaKnown RBP9.71□□□□□ -0.86
MCF2L-228ENST00000487354 NEXN-AS1Q8NBZ9 246 aa9.71□□□□□ -0.86
MCF2L-228ENST00000487354 RPL36ALQ969Q0 106 aaKnown RBP9.71□□□□□ -0.86
MCF2L-228ENST00000487354 LPAP08519 4548 aa9.71□□□□□ -0.86
MCF2L-228ENST00000487354 PRR27Q6MZM9 219 aa9.7□□□□□ -0.86
MCF2L-228ENST00000487354 CLPSL2Q6UWE3 100 aa9.7□□□□□ -0.86
MCF2L-228ENST00000487354 NTM-AS1Q6ZSK4 140 aa9.7□□□□□ -0.86
MCF2L-228ENST00000487354 COX8CQ7Z4L0 72 aa9.7□□□□□ -0.86
MCF2L-228ENST00000487354 SPACA4Q8TDM5 124 aa9.7□□□□□ -0.86
MCF2L-228ENST00000487354 LINC01600Q96MT4 127 aa9.7□□□□□ -0.86
MCF2L-228ENST00000487354 A0A087WYN8 130 aa9.69□□□□□ -0.86
MCF2L-228ENST00000487354 M0R381 172 aa9.69□□□□□ -0.86
MCF2L-228ENST00000487354 SH2D1AO60880 128 aa9.69□□□□□ -0.86
MCF2L-228ENST00000487354 PTTG1O95997 202 aa9.69□□□□□ -0.86
MCF2L-228ENST00000487354 MZT2BQ6NZ67 158 aa9.69□□□□□ -0.86
MCF2L-228ENST00000487354 PHOX2AO14813 284 aa9.68□□□□□ -0.86
MCF2L-228ENST00000487354 PHLDA3Q9Y5J5 127 aa9.68□□□□□ -0.86
MCF2L-228ENST00000487354 A0A1W2PRE2 83 aa9.67□□□□□ -0.86
MCF2L-228ENST00000487354 PET100P0DJ07 73 aa9.67□□□□□ -0.86
MCF2L-228ENST00000487354 RBX1P62877 108 aa9.67□□□□□ -0.86
MCF2L-228ENST00000487354 LINC01559Q495D7 138 aa9.67□□□□□ -0.86
MCF2L-228ENST00000487354 LINC00269Q8N2A0 174 aa9.67□□□□□ -0.86
MCF2L-228ENST00000487354 HSD17B11Q8NBQ5 300 aa9.67□□□□□ -0.86
MCF2L-228ENST00000487354 TMEM167BQ9NRX6 74 aa9.67□□□□□ -0.86
MCF2L-228ENST00000487354 PLAC8Q9NZF1 115 aa9.67□□□□□ -0.86
MCF2L-228ENST00000487354 PEX7O00628 323 aa9.66□□□□□ -0.86
MCF2L-228ENST00000487354 CXorf1O96002 111 aa9.66□□□□□ -0.86
MCF2L-228ENST00000487354 IFITM3Q01628 133 aa9.66□□□□□ -0.86
MCF2L-228ENST00000487354 ZFP82Q8N141 532 aa9.66□□□□□ -0.86
MCF2L-228ENST00000487354 ENKURQ8TC29 256 aa9.66□□□□□ -0.86
MCF2L-228ENST00000487354 RNF185Q96GF1 192 aa9.66□□□□□ -0.86
MCF2L-228ENST00000487354 CHCHD5Q9BSY4 110 aa9.66□□□□□ -0.86
MCF2L-228ENST00000487354 PSMG3Q9BT73 122 aaPredicted RBP9.66□□□□□ -0.86
MCF2L-228ENST00000487354 KIF25-AS1Q9Y6Z4 181 aa9.66□□□□□ -0.86
MCF2L-228ENST00000487354 TMSB15BA0A087X1C1 80 aa9.65□□□□□ -0.86
MCF2L-228ENST00000487354 INMT-MINDY4F8WBC2 141 aa9.65□□□□□ -0.86
MCF2L-228ENST00000487354 TPT1P13693 172 aaKnown RBP9.65□□□□□ -0.86
MCF2L-228ENST00000487354 ATP6V0CP27449 155 aa9.65□□□□□ -0.86
MCF2L-228ENST00000487354 RAB4BP61018 213 aa9.65□□□□□ -0.86
MCF2L-228ENST00000487354 ZNF726P1Q15940 193 aa9.65□□□□□ -0.86
MCF2L-228ENST00000487354 ZNF674Q2M3X9 581 aa9.65□□□□□ -0.86
MCF2L-228ENST00000487354 CLRN3Q8NCR9 226 aa9.65□□□□□ -0.86
MCF2L-228ENST00000487354 VAX2Q9UIW0 290 aa9.65□□□□□ -0.86
MCF2L-228ENST00000487354 GAS8-AS1O95177 125 aa9.64□□□□□ -0.87
MCF2L-228ENST00000487354 KRTAP10-8P60410 259 aa9.64□□□□□ -0.87
MCF2L-228ENST00000487354 FAM162BQ5T6X4 162 aa9.64□□□□□ -0.87
MCF2L-228ENST00000487354 IGLV10-54A0A075B6I4 117 aa9.63□□□□□ -0.87
MCF2L-228ENST00000487354 IGHV3-64A0A075B6Q5 118 aa9.63□□□□□ -0.87
MCF2L-228ENST00000487354 A0A0J9YXV3 536 aa9.63□□□□□ -0.87
MCF2L-228ENST00000487354 hDV102S1A0JD36 115 aa9.63□□□□□ -0.87
MCF2L-228ENST00000487354 PRR3P79522 188 aaKnown RBP9.63□□□□□ -0.87
MCF2L-228ENST00000487354 GAGE6Q13070 117 aa9.63□□□□□ -0.87
MCF2L-228ENST00000487354 OR10AG1Q8NH19 301 aa9.63□□□□□ -0.87
MCF2L-228ENST00000487354 MARVELD1Q9BSK0 173 aa9.63□□□□□ -0.87
MCF2L-228ENST00000487354 FAM74A7A6NL05 159 aa9.62□□□□□ -0.87
MCF2L-228ENST00000487354 UBE2G2P60604 165 aa9.62□□□□□ -0.87
MCF2L-228ENST00000487354 PKIAP61925 76 aa9.62□□□□□ -0.87
MCF2L-228ENST00000487354 ZNF56Q15929 161 aa9.62□□□□□ -0.87
MCF2L-228ENST00000487354 GFRA4Q9GZZ7 299 aa9.62□□□□□ -0.87
MCF2L-228ENST00000487354 MUC21A0A0G2JKD1 596 aa9.61□□□□□ -0.87
MCF2L-228ENST00000487354 IFNA7P01567 189 aa9.61□□□□□ -0.87
MCF2L-228ENST00000487354 SERF2P84101 59 aa9.61□□□□□ -0.87
MCF2L-228ENST00000487354 REG3AQ06141 175 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms