RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 ANAPC16Q96DE5 110 aa13.54□□□□□ -0.24
PCOLCE-208ENST00000487172 TRBV6-4A0A1B0GX49 114 aa13.53□□□□□ -0.24
PCOLCE-208ENST00000487172 HIGD1CA8MV81 97 aa13.53□□□□□ -0.24
PCOLCE-208ENST00000487172 PAX4O43316 350 aa13.53□□□□□ -0.24
PCOLCE-208ENST00000487172 RNF212Q495C1 297 aa13.53□□□□□ -0.24
PCOLCE-208ENST00000487172 CARHSP1Q9Y2V2 147 aaKnown RBP13.53□□□□□ -0.24
PCOLCE-208ENST00000487172 IGHV3-73A0A0B4J1V6 119 aa13.52□□□□□ -0.25
PCOLCE-208ENST00000487172 A0A0J9YY99 117 aa13.52□□□□□ -0.25
PCOLCE-208ENST00000487172 SMIM27A0A1W2PRY6 76 aa13.52□□□□□ -0.25
PCOLCE-208ENST00000487172 MT-ND4LP03901 98 aa13.52□□□□□ -0.25
PCOLCE-208ENST00000487172 SSTP61278 116 aa13.52□□□□□ -0.25
PCOLCE-208ENST00000487172 PGLYRP4Q96LB8 373 aa13.52□□□□□ -0.25
PCOLCE-208ENST00000487172 AP1S3Q96PC3 154 aa13.52□□□□□ -0.25
PCOLCE-208ENST00000487172 MSRB1Q9NZV6 116 aa13.52□□□□□ -0.25
PCOLCE-208ENST00000487172 NAT8BQ9UHF3 227 aa13.52□□□□□ -0.25
PCOLCE-208ENST00000487172 KIF25-AS1Q9Y6Z4 181 aa13.52□□□□□ -0.25
PCOLCE-208ENST00000487172 A0A087WWL8 130 aa13.51□□□□□ -0.25
PCOLCE-208ENST00000487172 TRGC1P0CF51 173 aa13.51□□□□□ -0.25
PCOLCE-208ENST00000487172 NUP35Q8NFH5 326 aa13.51□□□□□ -0.25
PCOLCE-208ENST00000487172 TWIST1Q15672 202 aa13.5□□□□□ -0.25
PCOLCE-208ENST00000487172 FAM74A4Q5TZK3 123 aa13.5□□□□□ -0.25
PCOLCE-208ENST00000487172 C14orf178Q8N769 122 aaPredicted RBP13.5□□□□□ -0.25
PCOLCE-208ENST00000487172 SLC25A29Q8N8R3 303 aa13.5□□□□□ -0.25
PCOLCE-208ENST00000487172 BORCS7Q96B45 105 aa13.5□□□□□ -0.25
PCOLCE-208ENST00000487172 A0A1B0GUT8 65 aa13.49□□□□□ -0.25
PCOLCE-208ENST00000487172 NUDT3O95989 172 aa13.49□□□□□ -0.25
PCOLCE-208ENST00000487172 SMIM17P0DL12 118 aa13.49□□□□□ -0.25
PCOLCE-208ENST00000487172 RHOHQ15669 191 aa13.49□□□□□ -0.25
PCOLCE-208ENST00000487172 Q6ZSN1 163 aa13.49□□□□□ -0.25
PCOLCE-208ENST00000487172 A0A096LPF7 62 aa13.48□□□□□ -0.25
PCOLCE-208ENST00000487172 LINC00315P59091 139 aa13.48□□□□□ -0.25
PCOLCE-208ENST00000487172 RAB4BP61018 213 aa13.48□□□□□ -0.25
PCOLCE-208ENST00000487172 MRPL23Q16540 153 aaKnown RBP13.48□□□□□ -0.25
PCOLCE-208ENST00000487172 PRADC1Q9BSG0 188 aa13.48□□□□□ -0.25
PCOLCE-208ENST00000487172 ICOSQ9Y6W8 199 aa13.48□□□□□ -0.25
PCOLCE-208ENST00000487172 EVI2AP22794 236 aa13.47□□□□□ -0.25
PCOLCE-208ENST00000487172 NDUFA5Q16718 116 aa13.47□□□□□ -0.25
PCOLCE-208ENST00000487172 LGALS9CQ6DKI2 356 aa13.47□□□□□ -0.25
PCOLCE-208ENST00000487172 CTDSP1Q9GZU7 261 aa13.47□□□□□ -0.25
PCOLCE-208ENST00000487172 K7EQD1 137 aa13.46□□□□□ -0.25
PCOLCE-208ENST00000487172 GYPEP15421 78 aa13.46□□□□□ -0.25
PCOLCE-208ENST00000487172 RIGQ13278 110 aa13.46□□□□□ -0.25
PCOLCE-208ENST00000487172 DPH3P1Q9H4G8 78 aa13.46□□□□□ -0.25
PCOLCE-208ENST00000487172 PLECQ15149 4684 aaKnown RBP13.45□□□□□ -0.26
PCOLCE-208ENST00000487172 P0DMU3 169 aa13.45□□□□□ -0.26
PCOLCE-208ENST00000487172 FAM231AP0DMU4 169 aa13.45□□□□□ -0.26
PCOLCE-208ENST00000487172 FAM231CP0DMU5 169 aa13.45□□□□□ -0.26
PCOLCE-208ENST00000487172 SMIM15Q7Z3B0 74 aa13.45□□□□□ -0.26
PCOLCE-208ENST00000487172 TRBV10-1A0A0K0K1A3 114 aa13.44□□□□□ -0.26
PCOLCE-208ENST00000487172 ZNF56Q15929 161 aa13.44□□□□□ -0.26
PCOLCE-208ENST00000487172 SLC7A5P1Q8MH63 180 aa13.44□□□□□ -0.26
PCOLCE-208ENST00000487172 LINC00476Q8WZB0 136 aa13.44□□□□□ -0.26
PCOLCE-208ENST00000487172 IMMP2LQ96T52 175 aa13.44□□□□□ -0.26
PCOLCE-208ENST00000487172 TMEM242Q9NWH2 141 aa13.44□□□□□ -0.26
PCOLCE-208ENST00000487172 LOC100131303A0A0U1RQF7 123 aa13.43□□□□□ -0.26
PCOLCE-208ENST00000487172 SRIP30626 198 aa13.43□□□□□ -0.26
PCOLCE-208ENST00000487172 NEGR1Q7Z3B1 354 aa13.43□□□□□ -0.26
PCOLCE-208ENST00000487172 SH2D6Q7Z4S9 175 aa13.43□□□□□ -0.26
PCOLCE-208ENST00000487172 CLRN3Q8NCR9 226 aa13.43□□□□□ -0.26
PCOLCE-208ENST00000487172 TMEM191AQ9H0A3 160 aa13.43□□□□□ -0.26
PCOLCE-208ENST00000487172 LCE6AA0A183 80 aa13.42□□□□□ -0.26
PCOLCE-208ENST00000487172 A0A1B0GW15 77 aa13.42□□□□□ -0.26
PCOLCE-208ENST00000487172 F5H697 171 aa13.42□□□□□ -0.26
PCOLCE-208ENST00000487172 APOC3P02656 99 aa13.42□□□□□ -0.26
PCOLCE-208ENST00000487172 RHEBQ15382 184 aa13.42□□□□□ -0.26
PCOLCE-208ENST00000487172 A0A087WWC5 75 aa13.41□□□□□ -0.26
PCOLCE-208ENST00000487172 C7orf77A4D0Y5 90 aa13.41□□□□□ -0.26
PCOLCE-208ENST00000487172 MGPP08493 103 aa13.41□□□□□ -0.26
PCOLCE-208ENST00000487172 CCL18P55774 89 aa13.41□□□□□ -0.26
PCOLCE-208ENST00000487172 FAM3BP58499 235 aaPredicted RBP13.41□□□□□ -0.26
PCOLCE-208ENST00000487172 SVBPQ8N300 66 aa13.41□□□□□ -0.26
PCOLCE-208ENST00000487172 TENM2Q9NT68 2774 aa13.41□□□□□ -0.26
PCOLCE-208ENST00000487172 H7C1H1 209 aa13.4□□□□□ -0.26
PCOLCE-208ENST00000487172 LINC00694P0DN24 101 aa13.4□□□□□ -0.26
PCOLCE-208ENST00000487172 ESRGQ1W209 222 aa13.4□□□□□ -0.26
PCOLCE-208ENST00000487172 ATP5L2Q7Z4Y8 100 aa13.4□□□□□ -0.26
PCOLCE-208ENST00000487172 FRZBQ92765 325 aa13.4□□□□□ -0.26
PCOLCE-208ENST00000487172 Q9UF83 564 aa13.4□□□□□ -0.26
PCOLCE-208ENST00000487172 M0QY20 66 aa13.39□□□□□ -0.27
PCOLCE-208ENST00000487172 SNAPINO95295 136 aa13.39□□□□□ -0.27
PCOLCE-208ENST00000487172 LY6G6CO95867 125 aa13.39□□□□□ -0.27
PCOLCE-208ENST00000487172 SUMO4Q6EEV6 95 aa13.39□□□□□ -0.27
PCOLCE-208ENST00000487172 TRBV7-3A0A075B6L6 115 aa13.38□□□□□ -0.27
PCOLCE-208ENST00000487172 A0A1B0GXF2 115 aa13.38□□□□□ -0.27
PCOLCE-208ENST00000487172 GAGE12JA6NER3 117 aa13.38□□□□□ -0.27
PCOLCE-208ENST00000487172 S100A8P05109 93 aa13.38□□□□□ -0.27
PCOLCE-208ENST00000487172 RPL36AP83881 106 aaKnown RBP13.38□□□□□ -0.27
PCOLCE-208ENST00000487172 GAGE1Q13065 139 aa13.38□□□□□ -0.27
PCOLCE-208ENST00000487172 GAGE4Q13068 117 aa13.38□□□□□ -0.27
PCOLCE-208ENST00000487172 GAGE5Q13069 117 aa13.38□□□□□ -0.27
PCOLCE-208ENST00000487172 GAGE13Q4V321 117 aa13.38□□□□□ -0.27
PCOLCE-208ENST00000487172 LYPD5Q6UWN5 251 aa13.38□□□□□ -0.27
PCOLCE-208ENST00000487172 GATD1Q8NB37 220 aa13.38□□□□□ -0.27
PCOLCE-208ENST00000487172 NEXN-AS1Q8NBZ9 246 aa13.38□□□□□ -0.27
PCOLCE-208ENST00000487172 RPL36ALQ969Q0 106 aaKnown RBP13.38□□□□□ -0.27
PCOLCE-208ENST00000487172 DNAJC30Q96LL9 226 aa13.38□□□□□ -0.27
PCOLCE-208ENST00000487172 LINC00588Q9Y4M8 146 aa13.38□□□□□ -0.27
PCOLCE-208ENST00000487172 TIRAPP58753 221 aa13.37□□□□□ -0.27
PCOLCE-208ENST00000487172 HBBP68871 147 aa13.37□□□□□ -0.27
PCOLCE-208ENST00000487172 MRPL54Q6P161 138 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms