RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 TCTEX1D4Q5JR98 221 aa9.13□□□□□ -0.95
COL3A1-206ENST00000487010 A0A087WWL8 130 aa9.12□□□□□ -0.95
COL3A1-206ENST00000487010 SDHAF1A6NFY7 115 aa9.12□□□□□ -0.95
COL3A1-206ENST00000487010 TCL1BO95988 128 aa9.12□□□□□ -0.95
COL3A1-206ENST00000487010 UCNP55089 124 aa9.12□□□□□ -0.95
COL3A1-206ENST00000487010 ZNF876PQ49A33 203 aa9.12□□□□□ -0.95
COL3A1-206ENST00000487010 TMEM170BQ5T4T1 132 aa9.12□□□□□ -0.95
COL3A1-206ENST00000487010 ZNRF2Q8NHG8 242 aa9.12□□□□□ -0.95
COL3A1-206ENST00000487010 TRBV20-1A0A075B6N2 111 aa9.12□□□□□ -0.95
COL3A1-206ENST00000487010 TRBV27A0A0K0K1C4 114 aa9.12□□□□□ -0.95
COL3A1-206ENST00000487010 F5H697 171 aa9.12□□□□□ -0.95
COL3A1-206ENST00000487010 CKS1BP61024 79 aa9.12□□□□□ -0.95
COL3A1-206ENST00000487010 BRD3OSQ6XYD6 125 aa9.12□□□□□ -0.95
COL3A1-206ENST00000487010 PTH2Q96A98 100 aa9.12□□□□□ -0.95
COL3A1-206ENST00000487010 CARD19Q96LW7 228 aa9.12□□□□□ -0.95
COL3A1-206ENST00000487010 AMELXQ99217 191 aa9.12□□□□□ -0.95
COL3A1-206ENST00000487010 SVEP1Q4LDE5 3571 aa9.12□□□□□ -0.95
COL3A1-206ENST00000487010 TRBV6-5A0A0K0K1A5 114 aa9.11□□□□□ -0.95
COL3A1-206ENST00000487010 LGALS9O00182 355 aa9.11□□□□□ -0.95
COL3A1-206ENST00000487010 IGHG2P01859 326 aa9.11□□□□□ -0.95
COL3A1-206ENST00000487010 PF4V1P10720 104 aa9.11□□□□□ -0.95
COL3A1-206ENST00000487010 SRD5A1P18405 259 aa9.11□□□□□ -0.95
COL3A1-206ENST00000487010 TEN1Q86WV5 123 aa9.11□□□□□ -0.95
COL3A1-206ENST00000487010 SBSPONQ8IVN8 264 aa9.11□□□□□ -0.95
COL3A1-206ENST00000487010 PPDPFLQ8WWR9 84 aa9.11□□□□□ -0.95
COL3A1-206ENST00000487010 J3QQQ9 107 aa9.11□□□□□ -0.95
COL3A1-206ENST00000487010 FHL3Q13643 280 aa9.11□□□□□ -0.95
COL3A1-206ENST00000487010 C10orf126Q8N4M7 172 aa9.11□□□□□ -0.95
COL3A1-206ENST00000487010 DAZ1Q9NQZ3 744 aaKnown RBP9.11□□□□□ -0.95
COL3A1-206ENST00000487010 TRAV12-3A0A0B4J271 114 aa9.1□□□□□ -0.95
COL3A1-206ENST00000487010 ID1P41134 155 aa9.1□□□□□ -0.95
COL3A1-206ENST00000487010 CRYBA4P53673 196 aa9.1□□□□□ -0.95
COL3A1-206ENST00000487010 LY6EQ16553 131 aa9.1□□□□□ -0.95
COL3A1-206ENST00000487010 WFDC12Q8WWY7 111 aa9.1□□□□□ -0.95
COL3A1-206ENST00000487010 PRO1854Q9UHT4 67 aa9.1□□□□□ -0.95
COL3A1-206ENST00000487010 LGALS3P17931 250 aaKnown RBP9.09□□□□□ -0.95
COL3A1-206ENST00000487010 CEP295Q9C0D2 2601 aa9.09□□□□□ -0.95
COL3A1-206ENST00000487010 A8MWV9 139 aa9.09□□□□□ -0.95
COL3A1-206ENST00000487010 SPINK8P0C7L1 97 aa9.09□□□□□ -0.95
COL3A1-206ENST00000487010 EDN2P20800 178 aa9.09□□□□□ -0.95
COL3A1-206ENST00000487010 DCANP1Q8TF63 244 aa9.09□□□□□ -0.95
COL3A1-206ENST00000487010 C9orf85Q96MD7 179 aa9.09□□□□□ -0.95
COL3A1-206ENST00000487010 A6NDX4 124 aa9.08□□□□□ -0.96
COL3A1-206ENST00000487010 K7EMT4 169 aa9.08□□□□□ -0.96
COL3A1-206ENST00000487010 MT-ATP8P03928 68 aa9.08□□□□□ -0.96
COL3A1-206ENST00000487010 FAM74A4Q5TZK3 123 aa9.08□□□□□ -0.96
COL3A1-206ENST00000487010 VCX2Q9H322 139 aa9.08□□□□□ -0.96
COL3A1-206ENST00000487010 ZNF256Q9Y2P7 627 aaPredicted RBP9.08□□□□□ -0.96
COL3A1-206ENST00000487010 MUC6Q6W4X9 2439 aa9.08□□□□□ -0.96
COL3A1-206ENST00000487010 IGHV3-16A0A0C4DH30 117 aa9.08□□□□□ -0.96
COL3A1-206ENST00000487010 M0QY20 66 aa9.08□□□□□ -0.96
COL3A1-206ENST00000487010 LEPROTO15243 131 aa9.08□□□□□ -0.96
COL3A1-206ENST00000487010 IGLV1-40P01703 118 aa9.08□□□□□ -0.96
COL3A1-206ENST00000487010 SCGB1C2P0DMR2 95 aa9.08□□□□□ -0.96
COL3A1-206ENST00000487010 BLCAPP62952 87 aa9.08□□□□□ -0.96
COL3A1-206ENST00000487010 RHOHQ15669 191 aa9.08□□□□□ -0.96
COL3A1-206ENST00000487010 NSUN5P1Q3KNT7 163 aa9.08□□□□□ -0.96
COL3A1-206ENST00000487010 Q6ZUT4 128 aa9.08□□□□□ -0.96
COL3A1-206ENST00000487010 PTPRZ1P23471 2315 aaPredicted RBP9.07□□□□□ -0.96
COL3A1-206ENST00000487010 TMEM223A0PJW6 202 aa9.07□□□□□ -0.96
COL3A1-206ENST00000487010 H3BUX3 64 aa9.07□□□□□ -0.96
COL3A1-206ENST00000487010 XGP55808 180 aa9.07□□□□□ -0.96
COL3A1-206ENST00000487010 OPRPNQ99935 248 aaPredicted RBP9.07□□□□□ -0.96
COL3A1-206ENST00000487010 ZFHX3Q15911 3703 aa9.07□□□□□ -0.96
COL3A1-206ENST00000487010 ASH1LQ9NR48 2969 aaKnown RBP9.06□□□□□ -0.96
COL3A1-206ENST00000487010 A4D1N5 150 aa9.06□□□□□ -0.96
COL3A1-206ENST00000487010 TGFAP01135 160 aa9.06□□□□□ -0.96
COL3A1-206ENST00000487010 IGHV4-39P01824 125 aa9.06□□□□□ -0.96
COL3A1-206ENST00000487010 IGHV4-38-2P0DP08 117 aa9.06□□□□□ -0.96
COL3A1-206ENST00000487010 ZNF56Q15929 161 aa9.06□□□□□ -0.96
COL3A1-206ENST00000487010 MDFICQ9P1T7 246 aa9.06□□□□□ -0.96
COL3A1-206ENST00000487010 ZNF688P0C7X2 276 aa9.06□□□□□ -0.96
COL3A1-206ENST00000487010 P0DMU3 169 aa9.06□□□□□ -0.96
COL3A1-206ENST00000487010 FAM231AP0DMU4 169 aa9.06□□□□□ -0.96
COL3A1-206ENST00000487010 FAM231CP0DMU5 169 aa9.06□□□□□ -0.96
COL3A1-206ENST00000487010 ANKRD29Q8N6D5 301 aa9.06□□□□□ -0.96
COL3A1-206ENST00000487010 ODF3Q96PU9 254 aa9.06□□□□□ -0.96
COL3A1-206ENST00000487010 SPTBN1Q01082 2364 aaKnown RBP9.05□□□□□ -0.96
COL3A1-206ENST00000487010 SPTA1P02549 2419 aa9.05□□□□□ -0.96
COL3A1-206ENST00000487010 EIF4EBP3O60516 100 aaPredicted RBP9.05□□□□□ -0.96
COL3A1-206ENST00000487010 IGHV3-33P01772 117 aa9.05□□□□□ -0.96
COL3A1-206ENST00000487010 TRPT1Q86TN4 253 aaKnown RBP9.05□□□□□ -0.96
COL3A1-206ENST00000487010 TMEM263Q8WUH6 116 aaKnown RBP9.05□□□□□ -0.96
COL3A1-206ENST00000487010 RAX2Q96IS3 184 aa9.05□□□□□ -0.96
COL3A1-206ENST00000487010 GEMIN7Q9H840 131 aaKnown RBP9.05□□□□□ -0.96
COL3A1-206ENST00000487010 NBASA2RRP1 2371 aa9.04□□□□□ -0.96
COL3A1-206ENST00000487010 C19orf84I3L1E1 186 aa9.04□□□□□ -0.96
COL3A1-206ENST00000487010 ZNF22P17026 224 aaPredicted RBP9.04□□□□□ -0.96
COL3A1-206ENST00000487010 CFHR3Q02985 330 aa9.04□□□□□ -0.96
COL3A1-206ENST00000487010 ABCA2Q9BZC7 2435 aa9.04□□□□□ -0.96
COL3A1-206ENST00000487010 TRAV12-2A0A075B6T6 113 aa9.04□□□□□ -0.96
COL3A1-206ENST00000487010 A0A0B4J2C4 111 aa9.04□□□□□ -0.96
COL3A1-206ENST00000487010 IGHV4-61A0A0C4DH41 118 aa9.04□□□□□ -0.96
COL3A1-206ENST00000487010 M0QXV9 152 aa9.04□□□□□ -0.96
COL3A1-206ENST00000487010 RHODO00212 210 aa9.04□□□□□ -0.96
COL3A1-206ENST00000487010 Q8N1Y9 231 aa9.04□□□□□ -0.96
COL3A1-206ENST00000487010 C20orf203Q8NBC4 194 aa9.04□□□□□ -0.96
COL3A1-206ENST00000487010 ERG28Q9UKR5 140 aa9.04□□□□□ -0.96
COL3A1-206ENST00000487010 TRAV2A0A0B4J234 112 aa9.03□□□□□ -0.96
COL3A1-206ENST00000487010 A0A0J9YX75 114 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms