RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 MYO9AB2RTY4 2548 aa13.39□□□□□ -0.27
PDLIM7-207ENST00000486828 MUC4Q99102 2169 aa13.39□□□□□ -0.27
PDLIM7-207ENST00000486828 H7C1H1 209 aa13.39□□□□□ -0.27
PDLIM7-207ENST00000486828 OR4C5Q8NGB2 326 aa13.39□□□□□ -0.27
PDLIM7-207ENST00000486828 CSTL1Q9H114 145 aa13.39□□□□□ -0.27
PDLIM7-207ENST00000486828 CR1P17927 2039 aa13.38□□□□□ -0.27
PDLIM7-207ENST00000486828 ZANQ9Y493 2812 aa13.38□□□□□ -0.27
PDLIM7-207ENST00000486828 F8VRH5 84 aa13.38□□□□□ -0.27
PDLIM7-207ENST00000486828 H3BRM9 83 aa13.38□□□□□ -0.27
PDLIM7-207ENST00000486828 RPL32P62910 135 aaKnown RBP13.38□□□□□ -0.27
PDLIM7-207ENST00000486828 Q5PR19 223 aa13.38□□□□□ -0.27
PDLIM7-207ENST00000486828 AMMECR1LQ6DCA0 310 aa13.38□□□□□ -0.27
PDLIM7-207ENST00000486828 C2orf66Q6UXQ4 117 aa13.38□□□□□ -0.27
PDLIM7-207ENST00000486828 C9orf85Q96MD7 179 aa13.38□□□□□ -0.27
PDLIM7-207ENST00000486828 TTTY13Q9BZ97 58 aa13.38□□□□□ -0.27
PDLIM7-207ENST00000486828 IGHV3-16A0A0C4DH30 117 aa13.37□□□□□ -0.27
PDLIM7-207ENST00000486828 IGKV3-20P01619 116 aa13.37□□□□□ -0.27
PDLIM7-207ENST00000486828 NEXN-AS1Q8NBZ9 246 aa13.37□□□□□ -0.27
PDLIM7-207ENST00000486828 DUX5Q96PT3 197 aa13.37□□□□□ -0.27
PDLIM7-207ENST00000486828 JPT2Q9H910 190 aa13.37□□□□□ -0.27
PDLIM7-207ENST00000486828 TRAV12-2A0A075B6T6 113 aa13.37□□□□□ -0.27
PDLIM7-207ENST00000486828 TRAV8-6A0A0B4J262 113 aa13.37□□□□□ -0.27
PDLIM7-207ENST00000486828 DUSP14O95147 198 aaKnown RBP13.37□□□□□ -0.27
PDLIM7-207ENST00000486828 SUMO4Q6EEV6 95 aa13.36□□□□□ -0.27
PDLIM7-207ENST00000486828 KRTAP1-3Q8IUG1 177 aa13.36□□□□□ -0.27
PDLIM7-207ENST00000486828 Q8N2B8 174 aa13.35□□□□□ -0.27
PDLIM7-207ENST00000486828 CHAC1Q9BUX1 264 aa13.35□□□□□ -0.27
PDLIM7-207ENST00000486828 AKAP9Q99996 3911 aa13.35□□□□□ -0.27
PDLIM7-207ENST00000486828 FLNAP21333 2647 aaKnown RBP13.35□□□□□ -0.27
PDLIM7-207ENST00000486828 TRBV25-1A0A075B6N4 114 aa13.35□□□□□ -0.27
PDLIM7-207ENST00000486828 A0A087WWL8 130 aa13.35□□□□□ -0.27
PDLIM7-207ENST00000486828 FOXI2Q6ZQN5 318 aa13.35□□□□□ -0.27
PDLIM7-207ENST00000486828 IGHV1OR15-1A0A075B7D0 117 aa13.34□□□□□ -0.27
PDLIM7-207ENST00000486828 C9orf118A6NHY6 69 aa13.34□□□□□ -0.27
PDLIM7-207ENST00000486828 K7EP13 123 aa13.34□□□□□ -0.27
PDLIM7-207ENST00000486828 POLR2KP53803 58 aaKnown RBP13.34□□□□□ -0.27
PDLIM7-207ENST00000486828 SPINK13Q1W4C9 94 aa13.34□□□□□ -0.27
PDLIM7-207ENST00000486828 Q8N1Y9 231 aa13.34□□□□□ -0.27
PDLIM7-207ENST00000486828 BAALCQ8WXS3 180 aa13.34□□□□□ -0.27
PDLIM7-207ENST00000486828 MDFICQ9P1T7 246 aa13.34□□□□□ -0.27
PDLIM7-207ENST00000486828 TCTEX1D4Q5JR98 221 aa13.33□□□□□ -0.28
PDLIM7-207ENST00000486828 NEGR1Q7Z3B1 354 aa13.33□□□□□ -0.28
PDLIM7-207ENST00000486828 SYT8Q8NBV8 401 aa13.33□□□□□ -0.28
PDLIM7-207ENST00000486828 TMEM238C9JI98 176 aa13.33□□□□□ -0.28
PDLIM7-207ENST00000486828 AMTNQ6UX39 209 aa13.33□□□□□ -0.28
PDLIM7-207ENST00000486828 Q96MF0 132 aa13.33□□□□□ -0.28
PDLIM7-207ENST00000486828 TEX15Q9BXT5 2789 aa13.33□□□□□ -0.28
PDLIM7-207ENST00000486828 ZNF469Q96JG9 3925 aaPredicted RBP13.32□□□□□ -0.28
PDLIM7-207ENST00000486828 LINC01549A6NIU2 74 aa13.32□□□□□ -0.28
PDLIM7-207ENST00000486828 F5H697 171 aa13.32□□□□□ -0.28
PDLIM7-207ENST00000486828 CYSLTR1Q9Y271 337 aa13.32□□□□□ -0.28
PDLIM7-207ENST00000486828 VCYO14598 125 aa13.31□□□□□ -0.28
PDLIM7-207ENST00000486828 SLURP1P55000 103 aa13.31□□□□□ -0.28
PDLIM7-207ENST00000486828 C18orf65Q6ZTR6 163 aa13.31□□□□□ -0.28
PDLIM7-207ENST00000486828 MAPKAPK5-AS1Q8N8E1 139 aa13.31□□□□□ -0.28
PDLIM7-207ENST00000486828 OTOGQ6ZRI0 2925 aa13.31□□□□□ -0.28
PDLIM7-207ENST00000486828 TRBV6-5A0A0K0K1A5 114 aa13.31□□□□□ -0.28
PDLIM7-207ENST00000486828 GCSHP23434 173 aa13.31□□□□□ -0.28
PDLIM7-207ENST00000486828 ZFP2Q6ZN57 461 aa13.31□□□□□ -0.28
PDLIM7-207ENST00000486828 WFDC11Q8NEX6 87 aa13.31□□□□□ -0.28
PDLIM7-207ENST00000486828 TLN2Q9Y4G6 2542 aa13.3□□□□□ -0.28
PDLIM7-207ENST00000486828 PRSS29PA6NIE9 313 aa13.3□□□□□ -0.28
PDLIM7-207ENST00000486828 DEFB136Q30KP8 78 aa13.3□□□□□ -0.28
PDLIM7-207ENST00000486828 ACANP16112 2415 aa13.3□□□□□ -0.28
PDLIM7-207ENST00000486828 FXYD2P54710 66 aa13.29□□□□□ -0.28
PDLIM7-207ENST00000486828 FAM74A4Q5TZK3 123 aa13.29□□□□□ -0.28
PDLIM7-207ENST00000486828 JMJD8Q96S16 334 aa13.29□□□□□ -0.28
PDLIM7-207ENST00000486828 KIR2DL4Q99706 377 aa13.29□□□□□ -0.28
PDLIM7-207ENST00000486828 SDHAF1A6NFY7 115 aa13.29□□□□□ -0.28
PDLIM7-207ENST00000486828 LINC01619G3V211 115 aa13.29□□□□□ -0.28
PDLIM7-207ENST00000486828 H3BUT2 72 aa13.29□□□□□ -0.28
PDLIM7-207ENST00000486828 CRYGDP07320 174 aa13.29□□□□□ -0.28
PDLIM7-207ENST00000486828 TP53TG1Q9Y2A0 90 aa13.29□□□□□ -0.28
PDLIM7-207ENST00000486828 TRGV11A0A075B6L2 103 aa13.28□□□□□ -0.28
PDLIM7-207ENST00000486828 TRBV27A0A0K0K1C4 114 aa13.28□□□□□ -0.28
PDLIM7-207ENST00000486828 CEND1Q8N111 149 aa13.28□□□□□ -0.28
PDLIM7-207ENST00000486828 RAB37Q96AX2 223 aa13.28□□□□□ -0.28
PDLIM7-207ENST00000486828 TM2D2Q9BX73 214 aa13.28□□□□□ -0.28
PDLIM7-207ENST00000486828 GAGE10A6NGK3 116 aa13.27□□□□□ -0.28
PDLIM7-207ENST00000486828 OR11H12B2RN74 326 aa13.27□□□□□ -0.28
PDLIM7-207ENST00000486828 SMIM13P0DJ93 91 aa13.27□□□□□ -0.28
PDLIM7-207ENST00000486828 RIPPLY3P57055 190 aa13.27□□□□□ -0.28
PDLIM7-207ENST00000486828 ZNF56Q15929 161 aa13.27□□□□□ -0.28
PDLIM7-207ENST00000486828 TAL2Q16559 108 aa13.27□□□□□ -0.28
PDLIM7-207ENST00000486828 OR11H1Q8NG94 326 aa13.27□□□□□ -0.28
PDLIM7-207ENST00000486828 OR11H2Q8NH07 326 aa13.27□□□□□ -0.28
PDLIM7-207ENST00000486828 RNASE8Q8TDE3 154 aaKnown RBP13.27□□□□□ -0.28
PDLIM7-207ENST00000486828 C4orf3Q8WVX3 66 aa13.27□□□□□ -0.28
PDLIM7-207ENST00000486828 TRAV2A0A0B4J234 112 aa13.27□□□□□ -0.29
PDLIM7-207ENST00000486828 IGIPA6NJ69 53 aa13.27□□□□□ -0.29
PDLIM7-207ENST00000486828 M0QY20 66 aa13.27□□□□□ -0.29
PDLIM7-207ENST00000486828 TSHBP01222 138 aa13.27□□□□□ -0.29
PDLIM7-207ENST00000486828 PEMTQ9UBM1 199 aa13.27□□□□□ -0.29
PDLIM7-207ENST00000486828 KNCNA6PVL3 124 aa13.26□□□□□ -0.29
PDLIM7-207ENST00000486828 A8MTW9 85 aa13.26□□□□□ -0.29
PDLIM7-207ENST00000486828 DEFB131AP59861 70 aa13.26□□□□□ -0.29
PDLIM7-207ENST00000486828 MORN3Q6PF18 240 aaPredicted RBP13.26□□□□□ -0.29
PDLIM7-207ENST00000486828 GTF2H5Q6ZYL4 71 aa13.26□□□□□ -0.29
PDLIM7-207ENST00000486828 E9PLD3 99 aa13.25□□□□□ -0.29
PDLIM7-207ENST00000486828 ZNF876PQ49A33 203 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 187.5 ms