RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 KDM6BO15054 1643 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 DEPDC5O75140 1603 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 PREX2Q70Z35 1606 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 ABCA6Q8N139 1617 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 MYO3AQ8NEV4 1616 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 BORCS7-ASMTA0A0B4J1R7 106 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 A0A0D9SFI3 127 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 A0A0D9SG42 100 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 SMIM31A0A1B0GVY4 71 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 FAM25AB3EWG3 89 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 FAM25CB3EWG5 89 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 FAM25GB3EWG6 89 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 AKR1D1P51857 326 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 UNQ5815/PRO19632Q6UWF5 114 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 C10orf99Q6UWK7 81 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 LYPD5Q6UWN5 251 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 KRTAP19-3Q7Z4W3 81 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 TCTE3Q8IZS6 198 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 S100ZQ8WXG8 99 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 DMAC1Q96GE9 116 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 PTPRMP28827 1452 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 GRIN2AQ12879 1464 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 NLRP1Q9C000 1473 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 RIMS1Q86UR5 1692 aaKnown RBP0.83□□□□□ -2.28
SMC4-218ENST00000486711 QRICH2Q9H0J4 1663 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 SPHKAPQ2M3C7 1700 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 BCORL1Q5H9F3 1711 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 SLIT1O75093 1534 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 ABCC6O95255 1503 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 ADAMTS12P58397 1594 aa0.83□□□□□ -2.28
SMC4-218ENST00000486711 MADDQ8WXG6 1647 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 MAP3K4Q9Y6R4 1608 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 IQGAP1P46940 1657 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 ANKRD26Q9UPS8 1709 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 PVALEFA0A1B0GWK0 134 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 FAM92AA1XBS5 289 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 IGKCP01834 107 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 MT-ND4LP03901 98 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 DBIP07108 87 aaKnown RBP0.82□□□□□ -2.28
SMC4-218ENST00000486711 SCTP09683 121 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 ADCYAP1P18509 176 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 GNG11P61952 73 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 OR4S1Q8NGB4 309 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 SPANXDQ9BXN6 97 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 ATG5Q9H1Y0 275 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 SAR1AQ9NR31 198 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 CACFD1Q9UGQ2 172 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 ABCC3O15438 1527 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 AGLP35573 1532 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 MAGI3Q5TCQ9 1506 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.82□□□□□ -2.28
SMC4-218ENST00000486711 DUOX1Q9NRD9 1551 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 BICRAQ9NZM4 1560 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 CEP170BQ9Y4F5 1589 aaPredicted RBP0.82□□□□□ -2.28
SMC4-218ENST00000486711 KIAA1549LQ6ZVL6 1849 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 CPDO75976 1380 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 FER1L6Q2WGJ9 1857 aa0.82□□□□□ -2.28
SMC4-218ENST00000486711 MUC4Q99102 2169 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 KIF1AQ12756 1690 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 FAM208AQ9UK61 1670 aaKnown RBP0.81□□□□□ -2.28
SMC4-218ENST00000486711 C10orf71Q711Q0 1435 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 ZFC3H1O60293 1989 aaKnown RBP0.81□□□□□ -2.28
SMC4-218ENST00000486711 MBD5Q9P267 1494 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 NRXN1Q9ULB1 1477 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 KIF20BQ96Q89 1820 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 CXorf51AA0A1B0GTR3 108 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 TNFSF15O95150 251 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 FAUP35544 74 aaKnown RBP0.81□□□□□ -2.28
SMC4-218ENST00000486711 POLR2JP52435 117 aaKnown RBP0.81□□□□□ -2.28
SMC4-218ENST00000486711 PLGLB1Q02325 96 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 ALX1Q15699 326 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 IQCJQ1A5X6 159 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 SPINK13Q1W4C9 94 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 GLYATL3Q5SZD4 288 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 TMEM244Q5VVB8 128 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 Q5XG85 94 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 MMGT1Q8N4V1 131 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 TCEAL7Q9BRU2 100 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 PDCD10Q9BUL8 212 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 BANF2Q9H503 90 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 RERGLQ9H628 205 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 SCN3BQ9NY72 215 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 COPZ2Q9P299 210 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 NWD1Q149M9 1564 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 TANC2Q9HCD6 1990 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 CLTCQ00610 1675 aaKnown RBP0.81□□□□□ -2.28
SMC4-218ENST00000486711 PPRC1Q5VV67 1664 aaKnown RBP0.81□□□□□ -2.28
SMC4-218ENST00000486711 KNDC1Q76NI1 1749 aa0.81□□□□□ -2.28
SMC4-218ENST00000486711 TARBP1Q13395 1621 aaKnown RBP0.8□□□□□ -2.28
SMC4-218ENST00000486711 CICQ96RK0 1608 aaPredicted RBP0.8□□□□□ -2.28
SMC4-218ENST00000486711 A0A087WXM4 84 aa0.8□□□□□ -2.28
SMC4-218ENST00000486711 LOC101927531A0A1B0GV80 90 aa0.8□□□□□ -2.28
SMC4-218ENST00000486711 EFCAB10A6NFE3 127 aa0.8□□□□□ -2.28
SMC4-218ENST00000486711 C9JAW5 83 aa0.8□□□□□ -2.28
SMC4-218ENST00000486711 SMIM11AP58511 58 aa0.8□□□□□ -2.28
SMC4-218ENST00000486711 S100A12P80511 92 aa0.8□□□□□ -2.28
SMC4-218ENST00000486711 MRPS10P82664 201 aaKnown RBP0.8□□□□□ -2.28
SMC4-218ENST00000486711 FXYD3Q14802 87 aa0.8□□□□□ -2.28
SMC4-218ENST00000486711 SPCS2Q15005 226 aa0.8□□□□□ -2.28
SMC4-218ENST00000486711 PSMG4Q5JS54 123 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms