RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 Q8N6K4 173 aa8□□□□□ -1.13
CCDC171-208ENST00000486641 POM121L12Q8N7R1 296 aa8□□□□□ -1.13
CCDC171-208ENST00000486641 CCDC140Q96MF4 163 aa8□□□□□ -1.13
CCDC171-208ENST00000486641 DUX3Q96PT4 197 aa8□□□□□ -1.13
CCDC171-208ENST00000486641 OPRPNQ99935 248 aaPredicted RBP8□□□□□ -1.13
CCDC171-208ENST00000486641 TRAV16A0A0A6YYK6 109 aaPredicted RBP8□□□□□ -1.13
CCDC171-208ENST00000486641 METTL26Q96S19 204 aa8□□□□□ -1.13
CCDC171-208ENST00000486641 PPDPFQ9H3Y8 114 aa8□□□□□ -1.13
CCDC171-208ENST00000486641 JPT2Q9H910 190 aa8□□□□□ -1.13
CCDC171-208ENST00000486641 LENEPQ9Y5L5 61 aa8□□□□□ -1.13
CCDC171-208ENST00000486641 KIF25-AS1Q9Y6Z4 181 aa8□□□□□ -1.13
CCDC171-208ENST00000486641 MUC4Q99102 2169 aa7.99□□□□□ -1.13
CCDC171-208ENST00000486641 IGHV4OR15-8A0A075B7B6 117 aa7.99□□□□□ -1.13
CCDC171-208ENST00000486641 A0A087WW49 117 aa7.99□□□□□ -1.13
CCDC171-208ENST00000486641 ODF3BA8MYP8 253 aa7.99□□□□□ -1.13
CCDC171-208ENST00000486641 VCYO14598 125 aa7.99□□□□□ -1.13
CCDC171-208ENST00000486641 RNASE4P34096 147 aaKnown RBP7.99□□□□□ -1.13
CCDC171-208ENST00000486641 MRPL23Q16540 153 aaKnown RBP7.99□□□□□ -1.13
CCDC171-208ENST00000486641 ECSCRQ19T08 205 aa7.99□□□□□ -1.13
CCDC171-208ENST00000486641 ITLN2Q8WWU7 325 aaPredicted RBP7.99□□□□□ -1.13
CCDC171-208ENST00000486641 LINC01587Q99440 93 aa7.99□□□□□ -1.13
CCDC171-208ENST00000486641 VPREB3Q9UKI3 123 aa7.99□□□□□ -1.13
CCDC171-208ENST00000486641 DCHS2Q6V1P9 2916 aa7.99□□□□□ -1.13
CCDC171-208ENST00000486641 CEP250Q9BV73 2442 aa7.99□□□□□ -1.13
CCDC171-208ENST00000486641 M0R2P5 195 aa7.98□□□□□ -1.13
CCDC171-208ENST00000486641 PLA2G2CQ5R387 149 aa7.98□□□□□ -1.13
CCDC171-208ENST00000486641 LINC00477Q96M19 166 aa7.98□□□□□ -1.13
CCDC171-208ENST00000486641 SVEP1Q4LDE5 3571 aa7.98□□□□□ -1.13
CCDC171-208ENST00000486641 SUMO4Q6EEV6 95 aa7.98□□□□□ -1.13
CCDC171-208ENST00000486641 FAM110DQ8TAY7 271 aaPredicted RBP7.98□□□□□ -1.13
CCDC171-208ENST00000486641 ZNF580Q9UK33 172 aa7.98□□□□□ -1.13
CCDC171-208ENST00000486641 U3KQE9 123 aa7.98□□□□□ -1.13
CCDC171-208ENST00000486641 CUL9Q8IWT3 2517 aa7.97□□□□□ -1.13
CCDC171-208ENST00000486641 MED14OSP0DP75 135 aa7.97□□□□□ -1.13
CCDC171-208ENST00000486641 Q8N9W7 124 aa7.97□□□□□ -1.13
CCDC171-208ENST00000486641 TMEM126AQ9H061 195 aa7.97□□□□□ -1.13
CCDC171-208ENST00000486641 PCNX1Q96RV3 2341 aa7.97□□□□□ -1.13
CCDC171-208ENST00000486641 CNOT1A5YKK6 2376 aaKnown RBP7.97□□□□□ -1.13
CCDC171-208ENST00000486641 A0A0J9YXY3 114 aa7.97□□□□□ -1.13
CCDC171-208ENST00000486641 SDHAF1A6NFY7 115 aa7.97□□□□□ -1.13
CCDC171-208ENST00000486641 B9A039 149 aa7.97□□□□□ -1.13
CCDC171-208ENST00000486641 UBE2E1P51965 193 aa7.97□□□□□ -1.13
CCDC171-208ENST00000486641 LRBAP50851 2863 aa7.97□□□□□ -1.13
CCDC171-208ENST00000486641 A0A087WWL8 130 aa7.96□□□□□ -1.13
CCDC171-208ENST00000486641 G3V318 75 aa7.96□□□□□ -1.13
CCDC171-208ENST00000486641 ZNF22P17026 224 aaPredicted RBP7.96□□□□□ -1.13
CCDC171-208ENST00000486641 EBI3Q14213 229 aa7.96□□□□□ -1.13
CCDC171-208ENST00000486641 IGFL3Q6UXB1 125 aa7.96□□□□□ -1.13
CCDC171-208ENST00000486641 VMO1Q7Z5L0 202 aa7.96□□□□□ -1.13
CCDC171-208ENST00000486641 ICOSQ9Y6W8 199 aa7.96□□□□□ -1.13
CCDC171-208ENST00000486641 MGAQ8IWI9 3026 aa7.96□□□□□ -1.14
CCDC171-208ENST00000486641 ADARB2-AS1A8MUL3 147 aa7.96□□□□□ -1.14
CCDC171-208ENST00000486641 F5H697 171 aa7.96□□□□□ -1.14
CCDC171-208ENST00000486641 ATP6V0E1O15342 81 aa7.96□□□□□ -1.14
CCDC171-208ENST00000486641 LY6HO94772 140 aa7.96□□□□□ -1.14
CCDC171-208ENST00000486641 Q6ZSV7 163 aa7.96□□□□□ -1.14
CCDC171-208ENST00000486641 C9orf139Q6ZV77 190 aa7.96□□□□□ -1.14
CCDC171-208ENST00000486641 CLEC2BQ92478 149 aa7.96□□□□□ -1.14
CCDC171-208ENST00000486641 TRBV7-7A0A0K0K1E9 115 aa7.95□□□□□ -1.14
CCDC171-208ENST00000486641 F6UB75 175 aa7.95□□□□□ -1.14
CCDC171-208ENST00000486641 H3BT86 120 aa7.95□□□□□ -1.14
CCDC171-208ENST00000486641 DEFB121Q5J5C9 76 aa7.95□□□□□ -1.14
CCDC171-208ENST00000486641 ZNF256Q9Y2P7 627 aaPredicted RBP7.95□□□□□ -1.14
CCDC171-208ENST00000486641 A0A0J9YX75 114 aa7.95□□□□□ -1.14
CCDC171-208ENST00000486641 A0A0J9YXV3 536 aa7.95□□□□□ -1.14
CCDC171-208ENST00000486641 TRBV27A0A0K0K1C4 114 aa7.95□□□□□ -1.14
CCDC171-208ENST00000486641 FAM240AA0A1B0GVK7 77 aa7.95□□□□□ -1.14
CCDC171-208ENST00000486641 NXPH4O95158 308 aa7.95□□□□□ -1.14
CCDC171-208ENST00000486641 PRSS2P07478 247 aa7.95□□□□□ -1.14
CCDC171-208ENST00000486641 ID1P41134 155 aa7.95□□□□□ -1.14
CCDC171-208ENST00000486641 EEF1AKMT3Q96AZ1 226 aa7.95□□□□□ -1.14
CCDC171-208ENST00000486641 FAM19A4Q96LR4 140 aa7.95□□□□□ -1.14
CCDC171-208ENST00000486641 LITAFQ99732 161 aa7.95□□□□□ -1.14
CCDC171-208ENST00000486641 YAE1D1Q9NRH1 226 aa7.95□□□□□ -1.14
CCDC171-208ENST00000486641 ABCA4P78363 2273 aa7.94□□□□□ -1.14
CCDC171-208ENST00000486641 M0R1W7 72 aa7.94□□□□□ -1.14
CCDC171-208ENST00000486641 OVOL1O14753 267 aa7.94□□□□□ -1.14
CCDC171-208ENST00000486641 KLK9Q2XQG4 91 aa7.94□□□□□ -1.14
CCDC171-208ENST00000486641 KLK9Q9UKQ9 250 aa7.94□□□□□ -1.14
CCDC171-208ENST00000486641 TRGV11A0A075B6L2 103 aa7.94□□□□□ -1.14
CCDC171-208ENST00000486641 IGHV1-69P01742 117 aa7.94□□□□□ -1.14
CCDC171-208ENST00000486641 ADAMTSL4-AS1Q5T5F5 129 aa7.94□□□□□ -1.14
CCDC171-208ENST00000486641 RELNP78509 3460 aa7.93□□□□□ -1.14
CCDC171-208ENST00000486641 FAM236AA0A1B0GUQ0 79 aa7.93□□□□□ -1.14
CCDC171-208ENST00000486641 FAM236BA0A1B0GV22 79 aa7.93□□□□□ -1.14
CCDC171-208ENST00000486641 LINC00694P0DN24 101 aa7.93□□□□□ -1.14
CCDC171-208ENST00000486641 CEMP1Q6PRD7 247 aaPredicted RBP7.93□□□□□ -1.14
CCDC171-208ENST00000486641 SPXQ9BT56 116 aa7.93□□□□□ -1.14
CCDC171-208ENST00000486641 BSNQ9UPA5 3926 aa7.93□□□□□ -1.14
CCDC171-208ENST00000486641 TRBV7-1A0A0A6YYK4 115 aa7.92□□□□□ -1.14
CCDC171-208ENST00000486641 COX6CP09669 75 aa7.92□□□□□ -1.14
CCDC171-208ENST00000486641 IGHV3-30-3P0DP02 117 aa7.92□□□□□ -1.14
CCDC171-208ENST00000486641 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.92□□□□□ -1.14
CCDC171-208ENST00000486641 LST1O00453 97 aa7.92□□□□□ -1.14
CCDC171-208ENST00000486641 SOCS3O14543 225 aa7.92□□□□□ -1.14
CCDC171-208ENST00000486641 CD3EP07766 207 aa7.92□□□□□ -1.14
CCDC171-208ENST00000486641 NPC2P61916 151 aa7.92□□□□□ -1.14
CCDC171-208ENST00000486641 APRG1Q8IVJ8 170 aa7.92□□□□□ -1.14
CCDC171-208ENST00000486641 TMEM101Q96IK0 257 aa7.92□□□□□ -1.14
CCDC171-208ENST00000486641 TRBV6-5A0A0K0K1A5 114 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms