RNA–Protein interactions for RNA: ENST00000486516.5

COMMD6-211, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-211ENST00000486516 UNQ5815/PRO19632Q6UWF5 114 aa0.71□□□□□ -2.3
COMMD6-211ENST00000486516 C10orf82Q8WW14 230 aa0.71□□□□□ -2.3
COMMD6-211ENST00000486516 IFI27L1Q96BM0 104 aa0.71□□□□□ -2.3
COMMD6-211ENST00000486516 DMAC1Q96GE9 116 aa0.71□□□□□ -2.3
COMMD6-211ENST00000486516 ATG5Q9H1Y0 275 aa0.71□□□□□ -2.3
COMMD6-211ENST00000486516 ARFGEF3Q5TH69 2177 aa0.71□□□□□ -2.3
COMMD6-211ENST00000486516 ZFYVE16Q7Z3T8 1539 aa0.7□□□□□ -2.3
COMMD6-211ENST00000486516 TRAV30A0A087WSZ9 112 aa0.7□□□□□ -2.3
COMMD6-211ENST00000486516 IGLV3-32A0A0A0MS00 114 aa0.7□□□□□ -2.3
COMMD6-211ENST00000486516 IGKV3D-7A0A0C4DH55 119 aa0.7□□□□□ -2.3
COMMD6-211ENST00000486516 IGKV3OR2-268A0A0C4DH90 116 aa0.7□□□□□ -2.3
COMMD6-211ENST00000486516 NBDYA0A0U1RRE5 68 aa0.7□□□□□ -2.3
COMMD6-211ENST00000486516 LOC101927531A0A1B0GV80 90 aa0.7□□□□□ -2.3
COMMD6-211ENST00000486516 J3QKU1 62 aa0.7□□□□□ -2.3
COMMD6-211ENST00000486516 CCKP06307 115 aa0.7□□□□□ -2.3
COMMD6-211ENST00000486516 CBLN1P23435 193 aa0.7□□□□□ -2.3
COMMD6-211ENST00000486516 FXYD4P59646 89 aa0.7□□□□□ -2.3
COMMD6-211ENST00000486516 RPL37AP61513 92 aaKnown RBP0.7□□□□□ -2.3
COMMD6-211ENST00000486516 RBM3P98179 157 aaKnown RBP0.7□□□□□ -2.3
COMMD6-211ENST00000486516 SPATA45Q537H7 98 aa0.7□□□□□ -2.3
COMMD6-211ENST00000486516 NCMAPQ5T1S8 102 aa0.7□□□□□ -2.3
COMMD6-211ENST00000486516 DEFB132Q7Z7B7 95 aa0.7□□□□□ -2.3
COMMD6-211ENST00000486516 MRPL35Q9NZE8 188 aaKnown RBP0.7□□□□□ -2.3
COMMD6-211ENST00000486516 VPS8Q8N3P4 1428 aa0.7□□□□□ -2.3
COMMD6-211ENST00000486516 MYH9P35579 1960 aaKnown RBP0.7□□□□□ -2.3
COMMD6-211ENST00000486516 CASP8AP2Q9UKL3 1982 aa0.7□□□□□ -2.3
COMMD6-211ENST00000486516 LAMB1P07942 1786 aa0.7□□□□□ -2.3
COMMD6-211ENST00000486516 KTN1Q86UP2 1357 aaKnown RBP0.7□□□□□ -2.3
COMMD6-211ENST00000486516 COL4A1P02462 1669 aa0.69□□□□□ -2.3
COMMD6-211ENST00000486516 ROBO1Q9Y6N7 1651 aa0.69□□□□□ -2.3
COMMD6-211ENST00000486516 TRAV12-3A0A0B4J271 114 aa0.69□□□□□ -2.3
COMMD6-211ENST00000486516 TCRBV3S1A0A5B6 114 aa0.69□□□□□ -2.3
COMMD6-211ENST00000486516 IGKV2-29A2NJV5 120 aaPredicted RBP0.69□□□□□ -2.3
COMMD6-211ENST00000486516 TMEM218A2RU14 115 aa0.69□□□□□ -2.3
COMMD6-211ENST00000486516 HIGD1CA8MV81 97 aa0.69□□□□□ -2.3
COMMD6-211ENST00000486516 S100A8P05109 93 aa0.69□□□□□ -2.3
COMMD6-211ENST00000486516 SPINK8P0C7L1 97 aa0.69□□□□□ -2.3
COMMD6-211ENST00000486516 IFITM1P13164 125 aa0.69□□□□□ -2.3
COMMD6-211ENST00000486516 C12orf73Q69YU5 71 aa0.69□□□□□ -2.3
COMMD6-211ENST00000486516 GTF2H5Q6ZYL4 71 aa0.69□□□□□ -2.3
COMMD6-211ENST00000486516 NDUFA11Q86Y39 141 aa0.69□□□□□ -2.3
COMMD6-211ENST00000486516 ACBD7Q8N6N7 88 aa0.69□□□□□ -2.3
COMMD6-211ENST00000486516 SPTSSBQ8NFR3 76 aa0.69□□□□□ -2.3
COMMD6-211ENST00000486516 TET1Q8NFU7 2136 aa0.69□□□□□ -2.3
COMMD6-211ENST00000486516 AMELYQ99218 206 aa0.69□□□□□ -2.3
COMMD6-211ENST00000486516 RBBP6Q7Z6E9 1792 aaKnown RBP0.69□□□□□ -2.3
COMMD6-211ENST00000486516 CNTLNQ9NXG0 1405 aa0.69□□□□□ -2.3
COMMD6-211ENST00000486516 NINQ8N4C6 2090 aa0.69□□□□□ -2.3
COMMD6-211ENST00000486516 MYO18AQ92614 2054 aaKnown RBP0.69□□□□□ -2.3
COMMD6-211ENST00000486516 IFT140Q96RY7 1462 aa0.68□□□□□ -2.3
COMMD6-211ENST00000486516 CDK12Q9NYV4 1490 aaPredicted RBP0.68□□□□□ -2.3
COMMD6-211ENST00000486516 CLPSL1A2RUU4 121 aa0.68□□□□□ -2.3
COMMD6-211ENST00000486516 HCG22E2RYF7 251 aa0.68□□□□□ -2.3
COMMD6-211ENST00000486516 M0R143 59 aa0.68□□□□□ -2.3
COMMD6-211ENST00000486516 MPC2O95563 127 aa0.68□□□□□ -2.3
COMMD6-211ENST00000486516 IFNA17P01571 189 aa0.68□□□□□ -2.3
COMMD6-211ENST00000486516 UBE2D1P51668 147 aa0.68□□□□□ -2.3
COMMD6-211ENST00000486516 DAPK1P53355 1430 aa0.68□□□□□ -2.3
COMMD6-211ENST00000486516 CHD3Q12873 2000 aaKnown RBP0.68□□□□□ -2.3
COMMD6-211ENST00000486516 FXYD3Q14802 87 aa0.68□□□□□ -2.3
COMMD6-211ENST00000486516 NRKQ7Z2Y5 1582 aa0.68□□□□□ -2.3
COMMD6-211ENST00000486516 C8orf59Q8N0T1 100 aaPredicted RBP0.68□□□□□ -2.3
COMMD6-211ENST00000486516 INTS1Q8N201 2190 aaKnown RBP0.68□□□□□ -2.3
COMMD6-211ENST00000486516 SVBPQ8N300 66 aa0.68□□□□□ -2.3
COMMD6-211ENST00000486516 C5orf56Q8N8D9 126 aa0.68□□□□□ -2.3
COMMD6-211ENST00000486516 LINC00208Q96KT6 92 aa0.68□□□□□ -2.3
COMMD6-211ENST00000486516 SPANXDQ9BXN6 97 aa0.68□□□□□ -2.3
COMMD6-211ENST00000486516 DPH3P1Q9H4G8 78 aa0.68□□□□□ -2.3
COMMD6-211ENST00000486516 PCNX2A6NKB5 2137 aa0.68□□□□□ -2.3
COMMD6-211ENST00000486516 MAPKBP1O60336 1514 aa0.68□□□□□ -2.3
COMMD6-211ENST00000486516 ABCC10Q5T3U5 1492 aa0.67□□□□□ -2.3
COMMD6-211ENST00000486516 CPSF1Q10570 1443 aaKnown RBP0.67□□□□□ -2.3
COMMD6-211ENST00000486516 SDK1Q7Z5N4 2213 aa0.67□□□□□ -2.3
COMMD6-211ENST00000486516 TRBV10-3A0A0K0K1G6 114 aa0.67□□□□□ -2.3
COMMD6-211ENST00000486516 A6NIN4 97 aa0.67□□□□□ -2.3
COMMD6-211ENST00000486516 S100A10P60903 97 aa0.67□□□□□ -2.3
COMMD6-211ENST00000486516 CCL8P80075 99 aa0.67□□□□□ -2.3
COMMD6-211ENST00000486516 RPL7L1Q6DKI1 246 aaKnown RBP0.67□□□□□ -2.3
COMMD6-211ENST00000486516 XAF1Q6GPH4 301 aa0.67□□□□□ -2.3
COMMD6-211ENST00000486516 C5orf38Q86SI9 138 aa0.67□□□□□ -2.3
COMMD6-211ENST00000486516 TTC9CQ8N5M4 171 aa0.67□□□□□ -2.3
COMMD6-211ENST00000486516 LINC00474Q9P2X8 69 aa0.67□□□□□ -2.3
COMMD6-211ENST00000486516 E9PCH4 1651 aa0.67□□□□□ -2.3
COMMD6-211ENST00000486516 ZNF142P52746 1687 aaPredicted RBP0.67□□□□□ -2.3
COMMD6-211ENST00000486516 DLEC1Q9Y238 1755 aa0.67□□□□□ -2.3
COMMD6-211ENST00000486516 RREB1Q92766 1687 aa0.66□□□□□ -2.3
COMMD6-211ENST00000486516 C10orf71Q711Q0 1435 aa0.66□□□□□ -2.3
COMMD6-211ENST00000486516 CASKIN1Q8WXD9 1431 aa0.66□□□□□ -2.3
COMMD6-211ENST00000486516 A0A087WTM6 91 aa0.66□□□□□ -2.3
COMMD6-211ENST00000486516 IGKV2-40A0A087WW87 121 aaPredicted RBP0.66□□□□□ -2.3
COMMD6-211ENST00000486516 TRAV13-2A0A0B4J235 113 aa0.66□□□□□ -2.3
COMMD6-211ENST00000486516 TEX49A0A1B0GTD5 131 aa0.66□□□□□ -2.3
COMMD6-211ENST00000486516 RBAKDNA6NC62 111 aa0.66□□□□□ -2.3
COMMD6-211ENST00000486516 FAM24AA6NFZ4 105 aa0.66□□□□□ -2.3
COMMD6-211ENST00000486516 TMEM262E9PQX1 116 aa0.66□□□□□ -2.3
COMMD6-211ENST00000486516 SIX6O95475 246 aa0.66□□□□□ -2.3
COMMD6-211ENST00000486516 IGKV2D-40P01614 121 aaPredicted RBP0.66□□□□□ -2.3
COMMD6-211ENST00000486516 PRB1P04280 392 aa0.66□□□□□ -2.3
COMMD6-211ENST00000486516 CCL3L1P16619 93 aa0.66□□□□□ -2.3
COMMD6-211ENST00000486516 PKIAP61925 76 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms