RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 TRAV9-1A0A075B6T8 112 aa11.73□□□□□ -0.53
THBS3-207ENST00000486260 TEX48A0A1B0GUV7 120 aa11.73□□□□□ -0.53
THBS3-207ENST00000486260 A0A1B0GXF2 115 aa11.73□□□□□ -0.53
THBS3-207ENST00000486260 C12orf74Q32Q52 190 aa11.73□□□□□ -0.53
THBS3-207ENST00000486260 CFAP126Q5VTH2 177 aa11.73□□□□□ -0.53
THBS3-207ENST00000486260 C14orf178Q8N769 122 aaPredicted RBP11.73□□□□□ -0.53
THBS3-207ENST00000486260 NDUFAF3Q9BU61 184 aa11.73□□□□□ -0.53
THBS3-207ENST00000486260 A0A087WWL8 130 aa11.72□□□□□ -0.53
THBS3-207ENST00000486260 TGIF2-C20orf24A0A0A6YYL0 155 aa11.72□□□□□ -0.53
THBS3-207ENST00000486260 A8MWV9 139 aa11.72□□□□□ -0.53
THBS3-207ENST00000486260 IGHV3-53P01767 116 aa11.72□□□□□ -0.53
THBS3-207ENST00000486260 EVI2AP22794 236 aa11.72□□□□□ -0.53
THBS3-207ENST00000486260 ATP5L2Q7Z4Y8 100 aa11.72□□□□□ -0.53
THBS3-207ENST00000486260 C11orf45Q8TAV5 145 aa11.72□□□□□ -0.53
THBS3-207ENST00000486260 YPEL4Q96NS1 127 aa11.72□□□□□ -0.53
THBS3-207ENST00000486260 AP1S3Q96PC3 154 aa11.72□□□□□ -0.53
THBS3-207ENST00000486260 STAB2Q8WWQ8 2551 aa11.72□□□□□ -0.53
THBS3-207ENST00000486260 RS1O15537 224 aa11.72□□□□□ -0.53
THBS3-207ENST00000486260 TRGC1P0CF51 173 aa11.72□□□□□ -0.53
THBS3-207ENST00000486260 NANOS2P60321 138 aaKnown RBP11.72□□□□□ -0.53
THBS3-207ENST00000486260 HBBP68871 147 aa11.72□□□□□ -0.53
THBS3-207ENST00000486260 OR4C5Q8NGB2 326 aa11.72□□□□□ -0.53
THBS3-207ENST00000486260 ZNF479Q96JC4 524 aa11.72□□□□□ -0.53
THBS3-207ENST00000486260 EDA2RQ9HAV5 297 aa11.72□□□□□ -0.53
THBS3-207ENST00000486260 TRAV4A0A0B4J268 109 aa11.71□□□□□ -0.54
THBS3-207ENST00000486260 CRYGDP07320 174 aa11.71□□□□□ -0.54
THBS3-207ENST00000486260 FAM74A4Q5TZK3 123 aa11.71□□□□□ -0.54
THBS3-207ENST00000486260 C18orf15Q96N68 181 aa11.71□□□□□ -0.54
THBS3-207ENST00000486260 IGHV3-73A0A0B4J1V6 119 aa11.7□□□□□ -0.54
THBS3-207ENST00000486260 A0A1B0GW15 77 aa11.7□□□□□ -0.54
THBS3-207ENST00000486260 S100A6P06703 90 aa11.7□□□□□ -0.54
THBS3-207ENST00000486260 KIF25-AS1Q9Y6Z4 181 aa11.7□□□□□ -0.54
THBS3-207ENST00000486260 TGP01266 2768 aa11.7□□□□□ -0.54
THBS3-207ENST00000486260 NACAE9PAV3 2078 aa11.7□□□□□ -0.54
THBS3-207ENST00000486260 TRBV24-1A0A075B6N3 115 aa11.69□□□□□ -0.54
THBS3-207ENST00000486260 SMIM17P0DL12 118 aa11.69□□□□□ -0.54
THBS3-207ENST00000486260 SNRPEP62304 92 aaKnown RBP11.69□□□□□ -0.54
THBS3-207ENST00000486260 Q6ZTC4 211 aa11.69□□□□□ -0.54
THBS3-207ENST00000486260 SMIM15Q7Z3B0 74 aa11.69□□□□□ -0.54
THBS3-207ENST00000486260 TMEM191AQ9H0A3 160 aa11.69□□□□□ -0.54
THBS3-207ENST00000486260 UFSP1Q6NVU6 142 aa11.69□□□□□ -0.54
THBS3-207ENST00000486260 LINC00469Q8N7U9 141 aa11.69□□□□□ -0.54
THBS3-207ENST00000486260 DPH3P1Q9H4G8 78 aa11.69□□□□□ -0.54
THBS3-207ENST00000486260 RAB4BP61018 213 aa11.68□□□□□ -0.54
THBS3-207ENST00000486260 ATP5G1P05496 136 aa11.67□□□□□ -0.54
THBS3-207ENST00000486260 HTN3P15516 51 aa11.67□□□□□ -0.54
THBS3-207ENST00000486260 LINC00315P59091 139 aa11.67□□□□□ -0.54
THBS3-207ENST00000486260 RASL11AQ6T310 242 aa11.67□□□□□ -0.54
THBS3-207ENST00000486260 FAM210BQ96KR6 192 aa11.67□□□□□ -0.54
THBS3-207ENST00000486260 MGPP08493 103 aa11.67□□□□□ -0.54
THBS3-207ENST00000486260 ZFP2Q6ZN57 461 aa11.67□□□□□ -0.54
THBS3-207ENST00000486260 AMN1Q8IY45 258 aa11.67□□□□□ -0.54
THBS3-207ENST00000486260 GATD1Q8NB37 220 aa11.67□□□□□ -0.54
THBS3-207ENST00000486260 RHODO00212 210 aa11.66□□□□□ -0.54
THBS3-207ENST00000486260 HOXA5P20719 270 aa11.66□□□□□ -0.54
THBS3-207ENST00000486260 FHL2Q14192 279 aa11.66□□□□□ -0.54
THBS3-207ENST00000486260 TMEM136Q6ZRR5 245 aa11.66□□□□□ -0.54
THBS3-207ENST00000486260 TRGV4A0A0C4DH28 118 aa11.65□□□□□ -0.54
THBS3-207ENST00000486260 LINC00587B1AMM8 73 aa11.65□□□□□ -0.54
THBS3-207ENST00000486260 F5H697 171 aa11.65□□□□□ -0.54
THBS3-207ENST00000486260 ZNF56Q15929 161 aa11.65□□□□□ -0.54
THBS3-207ENST00000486260 Q6ZSN1 163 aa11.65□□□□□ -0.54
THBS3-207ENST00000486260 RNF185Q96GF1 192 aa11.65□□□□□ -0.54
THBS3-207ENST00000486260 F5H768 121 aa11.64□□□□□ -0.55
THBS3-207ENST00000486260 RAB4AP20338 218 aa11.64□□□□□ -0.55
THBS3-207ENST00000486260 RAB5AP20339 215 aa11.64□□□□□ -0.55
THBS3-207ENST00000486260 FAM104BQ5XKR9 115 aa11.64□□□□□ -0.55
THBS3-207ENST00000486260 CIDEAO60543 219 aa11.64□□□□□ -0.55
THBS3-207ENST00000486260 GNB1LQ9BYB4 327 aa11.64□□□□□ -0.55
THBS3-207ENST00000486260 NIT2Q9NQR4 276 aa11.64□□□□□ -0.55
THBS3-207ENST00000486260 FABP9Q0Z7S8 132 aa11.63□□□□□ -0.55
THBS3-207ENST00000486260 COX19Q49B96 90 aa11.63□□□□□ -0.55
THBS3-207ENST00000486260 DEFB131BA0A096LNP1 70 aa11.62□□□□□ -0.55
THBS3-207ENST00000486260 TRAV26-2A0A0B4J265 109 aa11.62□□□□□ -0.55
THBS3-207ENST00000486260 GATA1P15976 413 aaPredicted RBP11.62□□□□□ -0.55
THBS3-207ENST00000486260 SLAQ13239 276 aa11.62□□□□□ -0.55
THBS3-207ENST00000486260 MRPL51Q4U2R6 128 aaKnown RBP11.62□□□□□ -0.55
THBS3-207ENST00000486260 SUMO4Q6EEV6 95 aa11.62□□□□□ -0.55
THBS3-207ENST00000486260 HHLA3Q9XRX5 114 aa11.62□□□□□ -0.55
THBS3-207ENST00000486260 HLA-DQA1P01909 254 aa11.62□□□□□ -0.55
THBS3-207ENST00000486260 SLC25A29Q8N8R3 303 aa11.62□□□□□ -0.55
THBS3-207ENST00000486260 TRAV10A0A0B4J240 114 aa11.61□□□□□ -0.55
THBS3-207ENST00000486260 SMKR1H3BMG3 65 aa11.6□□□□□ -0.55
THBS3-207ENST00000486260 GAS8-AS1O95177 125 aa11.6□□□□□ -0.55
THBS3-207ENST00000486260 P0DMU3 169 aa11.6□□□□□ -0.55
THBS3-207ENST00000486260 FAM231AP0DMU4 169 aa11.6□□□□□ -0.55
THBS3-207ENST00000486260 FAM231CP0DMU5 169 aa11.6□□□□□ -0.55
THBS3-207ENST00000486260 CRYBA4P53673 196 aa11.6□□□□□ -0.55
THBS3-207ENST00000486260 PHLDA1Q8WV24 401 aaPredicted RBP11.6□□□□□ -0.55
THBS3-207ENST00000486260 FRZBQ92765 325 aa11.6□□□□□ -0.55
THBS3-207ENST00000486260 MRPL18Q9H0U6 180 aaKnown RBP11.6□□□□□ -0.55
THBS3-207ENST00000486260 Q9UF83 564 aa11.6□□□□□ -0.55
THBS3-207ENST00000486260 PRO0255Q9UI72 69 aa11.6□□□□□ -0.55
THBS3-207ENST00000486260 TRAPPC1Q9Y5R8 145 aa11.6□□□□□ -0.55
THBS3-207ENST00000486260 DNAH7Q8WXX0 4024 aa11.6□□□□□ -0.55
THBS3-207ENST00000486260 M0QY20 66 aa11.59□□□□□ -0.55
THBS3-207ENST00000486260 NCR2O95944 276 aa11.59□□□□□ -0.55
THBS3-207ENST00000486260 APCSP02743 223 aa11.59□□□□□ -0.55
THBS3-207ENST00000486260 MT-ND6P03923 174 aa11.59□□□□□ -0.55
THBS3-207ENST00000486260 RPS10P46783 165 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms