RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 GATA1P15976 413 aaPredicted RBP10.37□□□□□ -0.75
COL9A1-207ENST00000486080 CKS2P33552 79 aa10.37□□□□□ -0.75
COL9A1-207ENST00000486080 C18orf32Q8TCD1 76 aa10.37□□□□□ -0.75
COL9A1-207ENST00000486080 NOP10Q9NPE3 64 aaKnown RBP10.37□□□□□ -0.75
COL9A1-207ENST00000486080 UBE2CO00762 179 aa10.36□□□□□ -0.75
COL9A1-207ENST00000486080 CRYGDP07320 174 aa10.36□□□□□ -0.75
COL9A1-207ENST00000486080 MGPP08493 103 aa10.36□□□□□ -0.75
COL9A1-207ENST00000486080 FAM74A4Q5TZK3 123 aa10.36□□□□□ -0.75
COL9A1-207ENST00000486080 C5orf52A6NGY3 159 aa10.35□□□□□ -0.75
COL9A1-207ENST00000486080 SMIM17P0DL12 118 aa10.35□□□□□ -0.75
COL9A1-207ENST00000486080 EMP1P54849 157 aa10.35□□□□□ -0.75
COL9A1-207ENST00000486080 KPRPQ5T749 579 aaPredicted RBP10.35□□□□□ -0.75
COL9A1-207ENST00000486080 Q6ZTI0 123 aa10.35□□□□□ -0.75
COL9A1-207ENST00000486080 ORMDL3Q8N138 153 aa10.35□□□□□ -0.75
COL9A1-207ENST00000486080 PTH2Q96A98 100 aa10.35□□□□□ -0.75
COL9A1-207ENST00000486080 PRELID3AQ96N28 172 aa10.35□□□□□ -0.75
COL9A1-207ENST00000486080 TRGV1A0A0A0MS02 117 aa10.35□□□□□ -0.75
COL9A1-207ENST00000486080 NUPR1O60356 82 aa10.35□□□□□ -0.75
COL9A1-207ENST00000486080 Q0VG73 95 aa10.35□□□□□ -0.75
COL9A1-207ENST00000486080 DAZ2Q13117 558 aaKnown RBP10.35□□□□□ -0.75
COL9A1-207ENST00000486080 OR11H2Q8NH07 326 aa10.35□□□□□ -0.75
COL9A1-207ENST00000486080 RASL10AQ92737 203 aa10.35□□□□□ -0.75
COL9A1-207ENST00000486080 NPYP01303 97 aa10.34□□□□□ -0.75
COL9A1-207ENST00000486080 LINC00310P59036 64 aa10.34□□□□□ -0.75
COL9A1-207ENST00000486080 OR10J3Q5JRS4 329 aa10.34□□□□□ -0.75
COL9A1-207ENST00000486080 COA6Q5JTJ3 125 aaKnown RBP10.34□□□□□ -0.75
COL9A1-207ENST00000486080 Q6ZWC4 215 aa10.34□□□□□ -0.75
COL9A1-207ENST00000486080 BAGE3Q86Y29 109 aa10.34□□□□□ -0.75
COL9A1-207ENST00000486080 POM121L12Q8N7R1 296 aa10.34□□□□□ -0.75
COL9A1-207ENST00000486080 RNF183Q96D59 192 aa10.34□□□□□ -0.75
COL9A1-207ENST00000486080 IGHV3-73A0A0B4J1V6 119 aa10.33□□□□□ -0.76
COL9A1-207ENST00000486080 K7EIL1 84 aa10.33□□□□□ -0.76
COL9A1-207ENST00000486080 PDZD11Q5EBL8 140 aa10.33□□□□□ -0.76
COL9A1-207ENST00000486080 PIK3CD-AS1Q5SR53 167 aa10.33□□□□□ -0.76
COL9A1-207ENST00000486080 CFAP126Q5VTH2 177 aa10.33□□□□□ -0.76
COL9A1-207ENST00000486080 SMIM9A6NGZ8 99 aa10.33□□□□□ -0.76
COL9A1-207ENST00000486080 F5H697 171 aa10.33□□□□□ -0.76
COL9A1-207ENST00000486080 SERF1AO75920 110 aa10.33□□□□□ -0.76
COL9A1-207ENST00000486080 PPBPP02775 128 aa10.33□□□□□ -0.76
COL9A1-207ENST00000486080 OVOL2Q9BRP0 275 aa10.33□□□□□ -0.76
COL9A1-207ENST00000486080 LOC105371267A0A1B0GV96 52 aa10.32□□□□□ -0.76
COL9A1-207ENST00000486080 A8MWV9 139 aa10.32□□□□□ -0.76
COL9A1-207ENST00000486080 DEFB4AO15263 64 aa10.32□□□□□ -0.76
COL9A1-207ENST00000486080 HOXA5P20719 270 aa10.32□□□□□ -0.76
COL9A1-207ENST00000486080 SUMO4Q6EEV6 95 aa10.32□□□□□ -0.76
COL9A1-207ENST00000486080 UFSP1Q6NVU6 142 aa10.32□□□□□ -0.76
COL9A1-207ENST00000486080 NRACQ8N912 160 aa10.32□□□□□ -0.76
COL9A1-207ENST00000486080 MRAP2Q96G30 205 aa10.32□□□□□ -0.76
COL9A1-207ENST00000486080 RETNQ9HD89 108 aa10.32□□□□□ -0.76
COL9A1-207ENST00000486080 IGHV4-28A0A0C4DH34 117 aa10.31□□□□□ -0.76
COL9A1-207ENST00000486080 LOC389332A0A1B0GUA5 103 aa10.31□□□□□ -0.76
COL9A1-207ENST00000486080 RS1O15537 224 aa10.31□□□□□ -0.76
COL9A1-207ENST00000486080 TNFRSF6BO95407 300 aa10.31□□□□□ -0.76
COL9A1-207ENST00000486080 ZNF56Q15929 161 aa10.31□□□□□ -0.76
COL9A1-207ENST00000486080 LGALS9BQ3B8N2 356 aa10.31□□□□□ -0.76
COL9A1-207ENST00000486080 RPL39LQ96EH5 51 aaKnown RBP10.31□□□□□ -0.76
COL9A1-207ENST00000486080 URB1-AS1Q96HZ7 61 aa10.31□□□□□ -0.76
COL9A1-207ENST00000486080 GAGE12BA1L429 117 aa10.3□□□□□ -0.76
COL9A1-207ENST00000486080 GAGE7O76087 117 aa10.3□□□□□ -0.76
COL9A1-207ENST00000486080 GAGE12FP0CL80 117 aa10.3□□□□□ -0.76
COL9A1-207ENST00000486080 GAGE12GP0CL81 117 aa10.3□□□□□ -0.76
COL9A1-207ENST00000486080 GAGE12IP0CL82 117 aa10.3□□□□□ -0.76
COL9A1-207ENST00000486080 IFITM10A6NMD0 228 aa10.3□□□□□ -0.76
COL9A1-207ENST00000486080 Q6ZSN1 163 aa10.3□□□□□ -0.76
COL9A1-207ENST00000486080 NIT1Q86X76 327 aa10.3□□□□□ -0.76
COL9A1-207ENST00000486080 HIST3H2BBQ8N257 126 aa10.3□□□□□ -0.76
COL9A1-207ENST00000486080 Q8NAQ8 132 aa10.3□□□□□ -0.76
COL9A1-207ENST00000486080 IFI27P40305 119 aaPredicted RBP10.29□□□□□ -0.76
COL9A1-207ENST00000486080 ZNF479Q96JC4 524 aa10.29□□□□□ -0.76
COL9A1-207ENST00000486080 NDUFAF3Q9BU61 184 aa10.29□□□□□ -0.76
COL9A1-207ENST00000486080 IGHV3-53P01767 116 aa10.28□□□□□ -0.76
COL9A1-207ENST00000486080 DEFB121Q5J5C9 76 aa10.28□□□□□ -0.76
COL9A1-207ENST00000486080 RNASEKQ6P5S7 137 aaKnown RBP10.28□□□□□ -0.76
COL9A1-207ENST00000486080 OR4C5Q8NGB2 326 aa10.28□□□□□ -0.76
COL9A1-207ENST00000486080 LAMTOR2Q9Y2Q5 125 aa10.28□□□□□ -0.76
COL9A1-207ENST00000486080 TENM3Q9P273 2699 aa10.28□□□□□ -0.76
COL9A1-207ENST00000486080 M0QY20 66 aa10.28□□□□□ -0.76
COL9A1-207ENST00000486080 MIFP14174 115 aa10.28□□□□□ -0.76
COL9A1-207ENST00000486080 SBSPONQ8IVN8 264 aa10.28□□□□□ -0.76
COL9A1-207ENST00000486080 TRGV2A0A075B6R0 118 aa10.27□□□□□ -0.77
COL9A1-207ENST00000486080 P0DMU3 169 aa10.27□□□□□ -0.77
COL9A1-207ENST00000486080 FAM231AP0DMU4 169 aa10.27□□□□□ -0.77
COL9A1-207ENST00000486080 FAM231CP0DMU5 169 aa10.27□□□□□ -0.77
COL9A1-207ENST00000486080 DEFB130BP0DP73 79 aa10.27□□□□□ -0.77
COL9A1-207ENST00000486080 DEFB130AP0DP74 79 aa10.27□□□□□ -0.77
COL9A1-207ENST00000486080 FAM222AQ5U5X8 452 aa10.27□□□□□ -0.77
COL9A1-207ENST00000486080 PRSS3P2Q8NHM4 247 aa10.27□□□□□ -0.77
COL9A1-207ENST00000486080 MAP1LC3AQ9H492 121 aa10.27□□□□□ -0.77
COL9A1-207ENST00000486080 TRAV4A0A0B4J268 109 aa10.26□□□□□ -0.77
COL9A1-207ENST00000486080 RHODO00212 210 aa10.26□□□□□ -0.77
COL9A1-207ENST00000486080 ESDP10768 282 aa10.26□□□□□ -0.77
COL9A1-207ENST00000486080 Q9UF83 564 aa10.26□□□□□ -0.77
COL9A1-207ENST00000486080 TP53TG1Q9Y2A0 90 aa10.26□□□□□ -0.77
COL9A1-207ENST00000486080 LINC00614P0C842 121 aa10.26□□□□□ -0.77
COL9A1-207ENST00000486080 ZFP2Q6ZN57 461 aa10.26□□□□□ -0.77
COL9A1-207ENST00000486080 FAM19A2Q8N3H0 131 aa10.26□□□□□ -0.77
COL9A1-207ENST00000486080 LINC00612Q8N6U2 182 aa10.26□□□□□ -0.77
COL9A1-207ENST00000486080 S100A2P29034 98 aa10.25□□□□□ -0.77
COL9A1-207ENST00000486080 PMCHL1Q16048 86 aa10.25□□□□□ -0.77
COL9A1-207ENST00000486080 MRAPQ8TCY5 172 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms