RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 RAB26Q9ULW5 256 aa4.01□□□□□ -1.77
SMC4-217ENST00000485867 ANKRD20A5PA0PJZ0 165 aa4□□□□□ -1.77
SMC4-217ENST00000485867 F6UZH7 168 aa4□□□□□ -1.77
SMC4-217ENST00000485867 TSC22D2O75157 780 aa4□□□□□ -1.77
SMC4-217ENST00000485867 NBEAP1P0C6P0 100 aa4□□□□□ -1.77
SMC4-217ENST00000485867 CSN1S1P47710 185 aa4□□□□□ -1.77
SMC4-217ENST00000485867 MAJINQ3KP22 176 aa4□□□□□ -1.77
SMC4-217ENST00000485867 STPG4Q8N801 248 aa4□□□□□ -1.77
SMC4-217ENST00000485867 DYNC2LI1Q8TCX1 351 aa4□□□□□ -1.77
SMC4-217ENST00000485867 FAM167A-AS1Q96KT0 104 aa4□□□□□ -1.77
SMC4-217ENST00000485867 VCX3BQ9H321 246 aa4□□□□□ -1.77
SMC4-217ENST00000485867 MCUBQ9NWR8 336 aa4□□□□□ -1.77
SMC4-217ENST00000485867 IGKV2-24A0A0C4DH68 120 aa3.99□□□□□ -1.77
SMC4-217ENST00000485867 TMEM262E9PQX1 116 aa3.99□□□□□ -1.77
SMC4-217ENST00000485867 SFT2D2O95562 160 aa3.99□□□□□ -1.77
SMC4-217ENST00000485867 RNASE3P12724 160 aaKnown RBP3.99□□□□□ -1.77
SMC4-217ENST00000485867 RPL29P47914 159 aaKnown RBP3.99□□□□□ -1.77
SMC4-217ENST00000485867 TAS2R30P59541 319 aa3.99□□□□□ -1.77
SMC4-217ENST00000485867 VBP1P61758 197 aa3.99□□□□□ -1.77
SMC4-217ENST00000485867 CACNG7P62955 275 aa3.99□□□□□ -1.77
SMC4-217ENST00000485867 COX6A2Q02221 97 aa3.99□□□□□ -1.77
SMC4-217ENST00000485867 PPP1R1AQ13522 171 aa3.99□□□□□ -1.77
SMC4-217ENST00000485867 UFSP1Q6NVU6 142 aa3.99□□□□□ -1.77
SMC4-217ENST00000485867 CLPSL2Q6UWE3 100 aa3.99□□□□□ -1.77
SMC4-217ENST00000485867 Q6ZRP5 223 aa3.99□□□□□ -1.77
SMC4-217ENST00000485867 TMEM75Q8N9X5 138 aa3.99□□□□□ -1.77
SMC4-217ENST00000485867 OR2G3Q8NGZ4 309 aa3.99□□□□□ -1.77
SMC4-217ENST00000485867 TVP23CQ96ET8 276 aa3.99□□□□□ -1.77
SMC4-217ENST00000485867 MIXL1Q9H2W2 232 aa3.99□□□□□ -1.77
SMC4-217ENST00000485867 PRR34Q9NV39 138 aa3.99□□□□□ -1.77
SMC4-217ENST00000485867 WDR83OSQ9Y284 106 aa3.99□□□□□ -1.77
SMC4-217ENST00000485867 MUC17Q685J3 4493 aa3.99□□□□□ -1.77
SMC4-217ENST00000485867 FAM24AA6NFZ4 105 aa3.98□□□□□ -1.77
SMC4-217ENST00000485867 A8MWV9 139 aa3.98□□□□□ -1.77
SMC4-217ENST00000485867 GCSAMLQ5JQS6 135 aa3.98□□□□□ -1.77
SMC4-217ENST00000485867 MIR17HGQ75NE6 70 aa3.98□□□□□ -1.77
SMC4-217ENST00000485867 AP3S1Q92572 193 aa3.98□□□□□ -1.77
SMC4-217ENST00000485867 FXYD5Q96DB9 178 aa3.98□□□□□ -1.77
SMC4-217ENST00000485867 JPT2Q9H910 190 aa3.98□□□□□ -1.77
SMC4-217ENST00000485867 IGLV10-54A0A075B6I4 117 aa3.97□□□□□ -1.77
SMC4-217ENST00000485867 TRBV6-8A0A0A6YYG3 113 aa3.97□□□□□ -1.77
SMC4-217ENST00000485867 UBE2L5PA0A1B0GUS4 154 aa3.97□□□□□ -1.77
SMC4-217ENST00000485867 C7orf66A4D0T2 115 aa3.97□□□□□ -1.77
SMC4-217ENST00000485867 NDUFS6O75380 124 aaKnown RBP3.97□□□□□ -1.77
SMC4-217ENST00000485867 UBE2D3P61077 147 aa3.97□□□□□ -1.77
SMC4-217ENST00000485867 RANP62826 216 aaKnown RBP3.97□□□□□ -1.77
SMC4-217ENST00000485867 UBE2D2P62837 147 aa3.97□□□□□ -1.77
SMC4-217ENST00000485867 TREM1Q9NP99 234 aa3.97□□□□□ -1.77
SMC4-217ENST00000485867 UQCC1Q9NVA1 299 aa3.97□□□□□ -1.77
SMC4-217ENST00000485867 A0A096LNI7 61 aa3.96□□□□□ -1.78
SMC4-217ENST00000485867 ZNF80P51504 273 aaPredicted RBP3.96□□□□□ -1.78
SMC4-217ENST00000485867 BAXQ07812 192 aa3.96□□□□□ -1.78
SMC4-217ENST00000485867 LGALSLQ3ZCW2 172 aaPredicted RBP3.96□□□□□ -1.78
SMC4-217ENST00000485867 LINC00269Q8N2A0 174 aa3.96□□□□□ -1.78
SMC4-217ENST00000485867 FUNDC2Q9BWH2 189 aa3.96□□□□□ -1.78
SMC4-217ENST00000485867 TRBV10-1A0A0K0K1A3 114 aa3.95□□□□□ -1.78
SMC4-217ENST00000485867 RGS5O15539 181 aa3.95□□□□□ -1.78
SMC4-217ENST00000485867 CST7O76096 145 aa3.95□□□□□ -1.78
SMC4-217ENST00000485867 PTTG1O95997 202 aa3.95□□□□□ -1.78
SMC4-217ENST00000485867 IFNA7P01567 189 aa3.95□□□□□ -1.78
SMC4-217ENST00000485867 RPS10P46783 165 aaKnown RBP3.95□□□□□ -1.78
SMC4-217ENST00000485867 PKIAP61925 76 aa3.95□□□□□ -1.78
SMC4-217ENST00000485867 RBX1P62877 108 aa3.95□□□□□ -1.78
SMC4-217ENST00000485867 IL18Q14116 193 aa3.95□□□□□ -1.78
SMC4-217ENST00000485867 IAH1Q2TAA2 248 aaPredicted RBP3.95□□□□□ -1.78
SMC4-217ENST00000485867 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
SMC4-217ENST00000485867 GOLT1AQ6ZVE7 132 aa3.95□□□□□ -1.78
SMC4-217ENST00000485867 C15orf56Q8N910 161 aa3.95□□□□□ -1.78
SMC4-217ENST00000485867 MCFD2Q8NI22 146 aa3.95□□□□□ -1.78
SMC4-217ENST00000485867 DIRAS2Q96HU8 199 aa3.95□□□□□ -1.78
SMC4-217ENST00000485867 HYLS1Q96M11 299 aa3.95□□□□□ -1.78
SMC4-217ENST00000485867 BCL7BQ9BQE9 202 aa3.95□□□□□ -1.78
SMC4-217ENST00000485867 CHCHD5Q9BSY4 110 aa3.95□□□□□ -1.78
SMC4-217ENST00000485867 KRTAP4-4Q9BYR3 166 aa3.95□□□□□ -1.78
SMC4-217ENST00000485867 SLIRPQ9GZT3 109 aaKnown RBP3.95□□□□□ -1.78
SMC4-217ENST00000485867 RABL2AQ9UBK7 228 aaPredicted RBP3.95□□□□□ -1.78
SMC4-217ENST00000485867 TRBV7-3A0A075B6L6 115 aa3.94□□□□□ -1.78
SMC4-217ENST00000485867 CTDSP2O14595 271 aa3.94□□□□□ -1.78
SMC4-217ENST00000485867 OR7C2O60412 319 aa3.94□□□□□ -1.78
SMC4-217ENST00000485867 CFC1BP0CG36 223 aa3.94□□□□□ -1.78
SMC4-217ENST00000485867 CFC1P0CG37 223 aa3.94□□□□□ -1.78
SMC4-217ENST00000485867 FGF7P21781 194 aa3.94□□□□□ -1.78
SMC4-217ENST00000485867 S100A10P60903 97 aa3.94□□□□□ -1.78
SMC4-217ENST00000485867 UBE2L3P68036 154 aaKnown RBP3.94□□□□□ -1.78
SMC4-217ENST00000485867 SPANXN2Q5MJ10 180 aa3.94□□□□□ -1.78
SMC4-217ENST00000485867 FAM74A4Q5TZK3 123 aa3.94□□□□□ -1.78
SMC4-217ENST00000485867 INO80EQ8NBZ0 244 aaPredicted RBP3.94□□□□□ -1.78
SMC4-217ENST00000485867 SLC25A21Q9BQT8 299 aaPredicted RBP3.94□□□□□ -1.78
SMC4-217ENST00000485867 NMES1Q9C002 83 aa3.94□□□□□ -1.78
SMC4-217ENST00000485867 Q9H521 79 aa3.94□□□□□ -1.78
SMC4-217ENST00000485867 IGLV1-50A0A075B6I6 118 aa3.93□□□□□ -1.78
SMC4-217ENST00000485867 C9orf170A2RU37 121 aa3.93□□□□□ -1.78
SMC4-217ENST00000485867 L7N2F9 121 aa3.93□□□□□ -1.78
SMC4-217ENST00000485867 FAUP35544 74 aaKnown RBP3.93□□□□□ -1.78
SMC4-217ENST00000485867 BCAP31P51572 246 aa3.93□□□□□ -1.78
SMC4-217ENST00000485867 VAMP2P63027 116 aa3.93□□□□□ -1.78
SMC4-217ENST00000485867 REG3AQ06141 175 aa3.93□□□□□ -1.78
SMC4-217ENST00000485867 OR10G8Q8NGN5 311 aa3.93□□□□□ -1.78
SMC4-217ENST00000485867 CMTM2Q8TAZ6 248 aa3.93□□□□□ -1.78
SMC4-217ENST00000485867 NPCDR1Q9BY65 106 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms