RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 Q8N3U1 123 aa9.07□□□□□ -0.96
SMARCD3-211ENST00000485592 RMI2Q96E14 147 aa9.07□□□□□ -0.96
SMARCD3-211ENST00000485592 C9orf85Q96MD7 179 aa9.07□□□□□ -0.96
SMARCD3-211ENST00000485592 PSG8Q9UQ74 426 aa9.07□□□□□ -0.96
SMARCD3-211ENST00000485592 RBFOX3A6NFN3 312 aa9.06□□□□□ -0.96
SMARCD3-211ENST00000485592 PGPEP1LA6NFU8 196 aa9.06□□□□□ -0.96
SMARCD3-211ENST00000485592 IFNA7P01567 189 aa9.06□□□□□ -0.96
SMARCD3-211ENST00000485592 EIF5AL1Q6IS14 154 aaKnown RBP9.06□□□□□ -0.96
SMARCD3-211ENST00000485592 HIST1H2BAQ96A08 127 aa9.06□□□□□ -0.96
SMARCD3-211ENST00000485592 PTH2Q96A98 100 aa9.06□□□□□ -0.96
SMARCD3-211ENST00000485592 NKX6-2Q9C056 277 aaPredicted RBP9.06□□□□□ -0.96
SMARCD3-211ENST00000485592 C11orf21Q9P2W6 132 aa9.06□□□□□ -0.96
SMARCD3-211ENST00000485592 GAGE12JA6NER3 117 aa9.05□□□□□ -0.96
SMARCD3-211ENST00000485592 K7EQM0 130 aa9.05□□□□□ -0.96
SMARCD3-211ENST00000485592 GCGP01275 180 aa9.05□□□□□ -0.96
SMARCD3-211ENST00000485592 GAGE1Q13065 139 aa9.05□□□□□ -0.96
SMARCD3-211ENST00000485592 GAGE4Q13068 117 aa9.05□□□□□ -0.96
SMARCD3-211ENST00000485592 GAGE5Q13069 117 aa9.05□□□□□ -0.96
SMARCD3-211ENST00000485592 GAGE13Q4V321 117 aa9.05□□□□□ -0.96
SMARCD3-211ENST00000485592 ALKAL2Q6UX46 152 aa9.05□□□□□ -0.96
SMARCD3-211ENST00000485592 DAZ4Q86SG3 579 aaKnown RBP9.05□□□□□ -0.96
SMARCD3-211ENST00000485592 PRNTQ86SH4 94 aa9.05□□□□□ -0.96
SMARCD3-211ENST00000485592 Q8N976 141 aa9.05□□□□□ -0.96
SMARCD3-211ENST00000485592 BAALCQ8WXS3 180 aa9.05□□□□□ -0.96
SMARCD3-211ENST00000485592 TCEAL7Q9BRU2 100 aa9.05□□□□□ -0.96
SMARCD3-211ENST00000485592 DAZ3Q9NR90 486 aaKnown RBP9.05□□□□□ -0.96
SMARCD3-211ENST00000485592 URGCP-MRPS24S4R325 110 aa9.05□□□□□ -0.96
SMARCD3-211ENST00000485592 A0A087WWC5 75 aa9.04□□□□□ -0.96
SMARCD3-211ENST00000485592 SCO2A0A1W2PP80 73 aa9.04□□□□□ -0.96
SMARCD3-211ENST00000485592 OXTP01178 125 aa9.04□□□□□ -0.96
SMARCD3-211ENST00000485592 LINC01620Q4KN68 170 aa9.04□□□□□ -0.96
SMARCD3-211ENST00000485592 CST9LP1Q5W188 147 aa9.04□□□□□ -0.96
SMARCD3-211ENST00000485592 PARLQ9H300 379 aa9.04□□□□□ -0.96
SMARCD3-211ENST00000485592 A8MWV9 139 aa9.03□□□□□ -0.96
SMARCD3-211ENST00000485592 LINC00694P0DN24 101 aa9.03□□□□□ -0.96
SMARCD3-211ENST00000485592 RNASE3P12724 160 aaKnown RBP9.03□□□□□ -0.96
SMARCD3-211ENST00000485592 SMUG1Q53HV7 270 aa9.03□□□□□ -0.96
SMARCD3-211ENST00000485592 ZFP2Q6ZN57 461 aa9.03□□□□□ -0.96
SMARCD3-211ENST00000485592 COX8CQ7Z4L0 72 aa9.03□□□□□ -0.96
SMARCD3-211ENST00000485592 CHAC1Q9BUX1 264 aa9.03□□□□□ -0.96
SMARCD3-211ENST00000485592 GNG13Q9P2W3 67 aa9.03□□□□□ -0.96
SMARCD3-211ENST00000485592 IGKV2D-24A0A075B6R9 120 aa9.02□□□□□ -0.97
SMARCD3-211ENST00000485592 TRBV6-1A0A0K0K1D8 114 aa9.02□□□□□ -0.97
SMARCD3-211ENST00000485592 LTAP01374 205 aa9.02□□□□□ -0.97
SMARCD3-211ENST00000485592 S100A4P26447 101 aaKnown RBP9.02□□□□□ -0.97
SMARCD3-211ENST00000485592 ZC2HC1AQ96GY0 325 aa9.02□□□□□ -0.97
SMARCD3-211ENST00000485592 FMC1Q96HJ9 113 aa9.02□□□□□ -0.97
SMARCD3-211ENST00000485592 MANBALQ9NQG1 85 aa9.02□□□□□ -0.97
SMARCD3-211ENST00000485592 AKR1C3P42330 323 aa9.01□□□□□ -0.97
SMARCD3-211ENST00000485592 CRIP1P50238 77 aa9.01□□□□□ -0.97
SMARCD3-211ENST00000485592 PIK3CD-AS1Q5SR53 167 aa9.01□□□□□ -0.97
SMARCD3-211ENST00000485592 SAPCD1Q5SSQ6 148 aa9.01□□□□□ -0.97
SMARCD3-211ENST00000485592 C11orf52Q96A22 123 aa9.01□□□□□ -0.97
SMARCD3-211ENST00000485592 PLA2G2DQ9UNK4 145 aa9.01□□□□□ -0.97
SMARCD3-211ENST00000485592 IGKV3D-20A0A0C4DH25 116 aa9□□□□□ -0.97
SMARCD3-211ENST00000485592 KRTAP10-4P60372 401 aaPredicted RBP9□□□□□ -0.97
SMARCD3-211ENST00000485592 KCNIP4Q6PIL6 250 aa9□□□□□ -0.97
SMARCD3-211ENST00000485592 LYPD6BQ8NI32 183 aa9□□□□□ -0.97
SMARCD3-211ENST00000485592 CIRBP-AS1Q8TBR5 109 aa9□□□□□ -0.97
SMARCD3-211ENST00000485592 DERL1Q9BUN8 251 aa9□□□□□ -0.97
SMARCD3-211ENST00000485592 IGLV2-8P01709 118 aa8.99□□□□□ -0.97
SMARCD3-211ENST00000485592 BCL2P10415 239 aa8.99□□□□□ -0.97
SMARCD3-211ENST00000485592 ASIPP42127 132 aa8.99□□□□□ -0.97
SMARCD3-211ENST00000485592 ELOBQ15370 118 aa8.99□□□□□ -0.97
SMARCD3-211ENST00000485592 NIT1Q86X76 327 aa8.99□□□□□ -0.97
SMARCD3-211ENST00000485592 MLST8Q9BVC4 326 aa8.99□□□□□ -0.97
SMARCD3-211ENST00000485592 SAMD10Q9BYL1 202 aa8.99□□□□□ -0.97
SMARCD3-211ENST00000485592 KLK12Q9UKR0 248 aa8.99□□□□□ -0.97
SMARCD3-211ENST00000485592 ZFP30Q9Y2G7 519 aa8.99□□□□□ -0.97
SMARCD3-211ENST00000485592 A0A087WX48 190 aa8.98□□□□□ -0.97
SMARCD3-211ENST00000485592 RHODO00212 210 aa8.98□□□□□ -0.97
SMARCD3-211ENST00000485592 UBE2G1P62253 170 aa8.98□□□□□ -0.97
SMARCD3-211ENST00000485592 MEF2BQ02080 365 aaPredicted RBP8.98□□□□□ -0.97
SMARCD3-211ENST00000485592 C14orf177Q52M58 125 aa8.98□□□□□ -0.97
SMARCD3-211ENST00000485592 C14orf178Q8N769 122 aaPredicted RBP8.98□□□□□ -0.97
SMARCD3-211ENST00000485592 UBE2WQ96B02 151 aa8.98□□□□□ -0.97
SMARCD3-211ENST00000485592 CHCHD7Q9BUK0 85 aa8.98□□□□□ -0.97
SMARCD3-211ENST00000485592 SH2D1AO60880 128 aa8.97□□□□□ -0.97
SMARCD3-211ENST00000485592 RPL35P42766 123 aaKnown RBP8.97□□□□□ -0.97
SMARCD3-211ENST00000485592 ZNF674Q2M3X9 581 aa8.97□□□□□ -0.97
SMARCD3-211ENST00000485592 UFSP1Q6NVU6 142 aa8.97□□□□□ -0.97
SMARCD3-211ENST00000485592 JPT2Q9H910 190 aa8.97□□□□□ -0.97
SMARCD3-211ENST00000485592 TRBV20OR9-2A0A075B6H5 130 aa8.96□□□□□ -0.98
SMARCD3-211ENST00000485592 TEX46H3BTG2 121 aa8.96□□□□□ -0.98
SMARCD3-211ENST00000485592 RPL37AP61513 92 aaKnown RBP8.96□□□□□ -0.98
SMARCD3-211ENST00000485592 Q0VG73 95 aa8.96□□□□□ -0.98
SMARCD3-211ENST00000485592 FAM74A4Q5TZK3 123 aa8.96□□□□□ -0.98
SMARCD3-211ENST00000485592 DNAJC30Q96LL9 226 aa8.96□□□□□ -0.98
SMARCD3-211ENST00000485592 IL36BQ9NZH7 164 aa8.96□□□□□ -0.98
SMARCD3-211ENST00000485592 Q9UF83 564 aa8.96□□□□□ -0.98
SMARCD3-211ENST00000485592 LRP1Q07954 4544 aaKnown RBP8.95□□□□□ -0.98
SMARCD3-211ENST00000485592 FABP5P3A8MUU1 101 aa8.95□□□□□ -0.98
SMARCD3-211ENST00000485592 B4DEV8 164 aa8.95□□□□□ -0.98
SMARCD3-211ENST00000485592 H3BVH4 76 aa8.95□□□□□ -0.98
SMARCD3-211ENST00000485592 S100A9P06702 114 aaKnown RBP8.95□□□□□ -0.98
SMARCD3-211ENST00000485592 BLOC1S1P78537 153 aa8.95□□□□□ -0.98
SMARCD3-211ENST00000485592 FAM162BQ5T6X4 162 aa8.95□□□□□ -0.98
SMARCD3-211ENST00000485592 DMRTA1Q5VZB9 504 aa8.95□□□□□ -0.98
SMARCD3-211ENST00000485592 ATRAIDQ6UW56 229 aa8.95□□□□□ -0.98
SMARCD3-211ENST00000485592 C1orf43Q9BWL3 253 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms