RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 A0A087WWL8 130 aa12.65□□□□□ -0.38
COL27A1-205ENST00000485397 BORCS7-ASMTA0A0B4J1R7 106 aa12.65□□□□□ -0.38
COL27A1-205ENST00000485397 RHODO00212 210 aa12.65□□□□□ -0.38
COL27A1-205ENST00000485397 PLA2G1BP04054 148 aaKnown RBP12.65□□□□□ -0.38
COL27A1-205ENST00000485397 GIPP09681 153 aaPredicted RBP12.65□□□□□ -0.38
COL27A1-205ENST00000485397 OR11H4Q8NGC9 324 aa12.65□□□□□ -0.38
COL27A1-205ENST00000485397 HIST1H2BAQ96A08 127 aa12.65□□□□□ -0.38
COL27A1-205ENST00000485397 FXYD6-FXYD2A0A087WZ82 144 aa12.64□□□□□ -0.39
COL27A1-205ENST00000485397 SFRP2Q96HF1 295 aa12.64□□□□□ -0.39
COL27A1-205ENST00000485397 KLK12Q9UKR0 248 aa12.64□□□□□ -0.39
COL27A1-205ENST00000485397 COX11Q9Y6N1 276 aa12.64□□□□□ -0.39
COL27A1-205ENST00000485397 URGCP-MRPS24S4R325 110 aa12.64□□□□□ -0.39
COL27A1-205ENST00000485397 IGKV2D-24A0A075B6R9 120 aa12.63□□□□□ -0.39
COL27A1-205ENST00000485397 TMSB15BA0A087X1C1 80 aa12.63□□□□□ -0.39
COL27A1-205ENST00000485397 PTTG1O95997 202 aa12.63□□□□□ -0.39
COL27A1-205ENST00000485397 COX8CQ7Z4L0 72 aa12.63□□□□□ -0.39
COL27A1-205ENST00000485397 RMI2Q96E14 147 aa12.63□□□□□ -0.39
COL27A1-205ENST00000485397 NKX6-2Q9C056 277 aaPredicted RBP12.63□□□□□ -0.39
COL27A1-205ENST00000485397 ZFP30Q9Y2G7 519 aa12.63□□□□□ -0.39
COL27A1-205ENST00000485397 PHLDA3Q9Y5J5 127 aa12.63□□□□□ -0.39
COL27A1-205ENST00000485397 RBFOX3A6NFN3 312 aa12.62□□□□□ -0.39
COL27A1-205ENST00000485397 M0R381 172 aa12.62□□□□□ -0.39
COL27A1-205ENST00000485397 AKR1C8PQ5T2L2 129 aa12.62□□□□□ -0.39
COL27A1-205ENST00000485397 FAM162BQ5T6X4 162 aa12.62□□□□□ -0.39
COL27A1-205ENST00000485397 SCXQ7RTU7 201 aa12.62□□□□□ -0.39
COL27A1-205ENST00000485397 UBE2WQ96B02 151 aa12.62□□□□□ -0.39
COL27A1-205ENST00000485397 TPT1P13693 172 aaKnown RBP12.61□□□□□ -0.39
COL27A1-205ENST00000485397 ZNF674Q2M3X9 581 aa12.61□□□□□ -0.39
COL27A1-205ENST00000485397 Q8N976 141 aa12.61□□□□□ -0.39
COL27A1-205ENST00000485397 MAP1LC3B2A6NCE7 125 aa12.6□□□□□ -0.39
COL27A1-205ENST00000485397 UBE2G1P62253 170 aa12.6□□□□□ -0.39
COL27A1-205ENST00000485397 LINC01559Q495D7 138 aa12.6□□□□□ -0.39
COL27A1-205ENST00000485397 FMC1Q96HJ9 113 aa12.6□□□□□ -0.39
COL27A1-205ENST00000485397 MAP1LC3BQ9GZQ8 125 aa12.6□□□□□ -0.39
COL27A1-205ENST00000485397 A0A087WX48 190 aa12.59□□□□□ -0.39
COL27A1-205ENST00000485397 SEC11BP0C7V7 166 aa12.59□□□□□ -0.39
COL27A1-205ENST00000485397 ZFP82Q8N141 532 aa12.59□□□□□ -0.39
COL27A1-205ENST00000485397 KRTAP29-1A8MX34 341 aaPredicted RBP12.58□□□□□ -0.4
COL27A1-205ENST00000485397 UBE2D3P61077 147 aa12.58□□□□□ -0.4
COL27A1-205ENST00000485397 UBE2D2P62837 147 aa12.58□□□□□ -0.4
COL27A1-205ENST00000485397 RPL36AP83881 106 aaKnown RBP12.58□□□□□ -0.4
COL27A1-205ENST00000485397 DEFB104AQ8WTQ1 72 aa12.58□□□□□ -0.4
COL27A1-205ENST00000485397 RPL36ALQ969Q0 106 aaKnown RBP12.58□□□□□ -0.4
COL27A1-205ENST00000485397 TRBV10-1A0A0K0K1A3 114 aa12.57□□□□□ -0.4
COL27A1-205ENST00000485397 TRBV6-1A0A0K0K1D8 114 aa12.57□□□□□ -0.4
COL27A1-205ENST00000485397 G3V3Q6 166 aa12.57□□□□□ -0.4
COL27A1-205ENST00000485397 LTAP01374 205 aa12.57□□□□□ -0.4
COL27A1-205ENST00000485397 ELOBQ15370 118 aa12.57□□□□□ -0.4
COL27A1-205ENST00000485397 CST9LP1Q5W188 147 aa12.57□□□□□ -0.4
COL27A1-205ENST00000485397 CHCHD7Q9BUK0 85 aa12.57□□□□□ -0.4
COL27A1-205ENST00000485397 CYTL1Q9NRR1 136 aa12.57□□□□□ -0.4
COL27A1-205ENST00000485397 TRBV7-3A0A075B6L6 115 aa12.56□□□□□ -0.4
COL27A1-205ENST00000485397 KCNIP4Q6PIL6 250 aa12.56□□□□□ -0.4
COL27A1-205ENST00000485397 ATRAIDQ6UW56 229 aa12.56□□□□□ -0.4
COL27A1-205ENST00000485397 CHAC1Q9BUX1 264 aa12.56□□□□□ -0.4
COL27A1-205ENST00000485397 TMEM262E9PQX1 116 aa12.55□□□□□ -0.4
COL27A1-205ENST00000485397 AKR1C3P42330 323 aa12.55□□□□□ -0.4
COL27A1-205ENST00000485397 FHITP49789 147 aa12.55□□□□□ -0.4
COL27A1-205ENST00000485397 ARPC5O15511 151 aa12.54□□□□□ -0.4
COL27A1-205ENST00000485397 KRTAP10-4P60372 401 aaPredicted RBP12.54□□□□□ -0.4
COL27A1-205ENST00000485397 RPL19P84098 196 aaKnown RBP12.54□□□□□ -0.4
COL27A1-205ENST00000485397 OR10G8Q8NGN5 311 aa12.54□□□□□ -0.4
COL27A1-205ENST00000485397 CIRBP-AS1Q8TBR5 109 aa12.54□□□□□ -0.4
COL27A1-205ENST00000485397 TRBV6-8A0A0A6YYG3 113 aa12.53□□□□□ -0.4
COL27A1-205ENST00000485397 PAGE4O60829 102 aa12.53□□□□□ -0.4
COL27A1-205ENST00000485397 Q0VG73 95 aa12.53□□□□□ -0.4
COL27A1-205ENST00000485397 ENHOQ6UWT2 76 aa12.53□□□□□ -0.4
COL27A1-205ENST00000485397 NEXN-AS1Q8NBZ9 246 aa12.53□□□□□ -0.4
COL27A1-205ENST00000485397 STOML3Q8TAV4 291 aa12.53□□□□□ -0.4
COL27A1-205ENST00000485397 TCEAL7Q9BRU2 100 aa12.53□□□□□ -0.4
COL27A1-205ENST00000485397 RAB4BP61018 213 aa12.52□□□□□ -0.41
COL27A1-205ENST00000485397 ZNF56Q15929 161 aa12.52□□□□□ -0.41
COL27A1-205ENST00000485397 C15orf54Q8N8G6 183 aa12.52□□□□□ -0.41
COL27A1-205ENST00000485397 OR10AG1Q8NH19 301 aa12.52□□□□□ -0.41
COL27A1-205ENST00000485397 C1orf43Q9BWL3 253 aa12.52□□□□□ -0.41
COL27A1-205ENST00000485397 LRP1Q07954 4544 aaKnown RBP12.52□□□□□ -0.41
COL27A1-205ENST00000485397 MPV17L2Q567V2 206 aa12.51□□□□□ -0.41
COL27A1-205ENST00000485397 MUC21A0A0G2JKD1 596 aa12.5□□□□□ -0.41
COL27A1-205ENST00000485397 MUC21A0A140T8X8 626 aa12.5□□□□□ -0.41
COL27A1-205ENST00000485397 PRR27Q6MZM9 219 aa12.5□□□□□ -0.41
COL27A1-205ENST00000485397 A0A1B0GV50 99 aa12.49□□□□□ -0.41
COL27A1-205ENST00000485397 SCO2A0A1W2PP80 73 aa12.49□□□□□ -0.41
COL27A1-205ENST00000485397 SMLR1H3BR10 107 aa12.49□□□□□ -0.41
COL27A1-205ENST00000485397 CRPP02741 224 aa12.49□□□□□ -0.41
COL27A1-205ENST00000485397 C14orf177Q52M58 125 aa12.49□□□□□ -0.41
COL27A1-205ENST00000485397 ZNF471Q9BX82 626 aaPredicted RBP12.49□□□□□ -0.41
COL27A1-205ENST00000485397 ANGP03950 147 aaKnown RBP12.48□□□□□ -0.41
COL27A1-205ENST00000485397 SSTP61278 116 aa12.48□□□□□ -0.41
COL27A1-205ENST00000485397 BAGE2Q86Y30 109 aa12.48□□□□□ -0.41
COL27A1-205ENST00000485397 SFT2D1Q8WV19 159 aa12.48□□□□□ -0.41
COL27A1-205ENST00000485397 CHCHD5Q9BSY4 110 aa12.48□□□□□ -0.41
COL27A1-205ENST00000485397 MLST8Q9BVC4 326 aa12.48□□□□□ -0.41
COL27A1-205ENST00000485397 FAT3Q8TDW7 4589 aa12.48□□□□□ -0.41
COL27A1-205ENST00000485397 SNAI2O43623 268 aa12.47□□□□□ -0.41
COL27A1-205ENST00000485397 CXCL1P09341 107 aa12.47□□□□□ -0.41
COL27A1-205ENST00000485397 MBD3L1Q8WWY6 194 aa12.47□□□□□ -0.41
COL27A1-205ENST00000485397 SSBP4Q9BWG4 385 aaPredicted RBP12.47□□□□□ -0.41
COL27A1-205ENST00000485397 USP17L23D6RBM5 183 aa12.46□□□□□ -0.41
COL27A1-205ENST00000485397 F5H697 171 aa12.46□□□□□ -0.41
COL27A1-205ENST00000485397 IGLV2-8P01709 118 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms