RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 SCN3BQ9NY72 215 aa2.23□□□□□ -2.05
LRCH3-217ENST00000483442 U3KQ87 197 aa2.23□□□□□ -2.05
LRCH3-217ENST00000483442 FSIP2Q5CZC0 6907 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 IGKV2D-24A0A075B6R9 120 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 IGKV1OR2-108A0A075B7D4 117 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 IGHV3-16A0A0C4DH30 117 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 FAM240AA0A1B0GVK7 77 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 TRDV1A0A1B0GX56 115 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 PANO1I0J062 215 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 ARPC5O15511 151 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 MED6O75586 246 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 OR5G3P0C626 314 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 AKR1C4P17516 323 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 RAB5AP20339 215 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 GPX4P36969 197 aaPredicted RBP2.22□□□□□ -2.05
LRCH3-217ENST00000483442 PIGPP57054 158 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 RND3P61587 244 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 SRPXP78539 464 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 SMAGPQ0VAQ4 97 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 ZNF846Q147U1 533 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 SPCS2Q15005 226 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 NMSQ5H8A3 153 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 CBLN2Q8IUK8 224 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 EIF4E3Q8N5X7 224 aaKnown RBP2.22□□□□□ -2.05
LRCH3-217ENST00000483442 ATP6V0E2Q8NHE4 81 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 SLC25A38Q96DW6 304 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 DNAJC30Q96LL9 226 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 CHCHD5Q9BSY4 110 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 TMEM147Q9BVK8 224 aa2.22□□□□□ -2.05
LRCH3-217ENST00000483442 LPAP08519 4548 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 TRAV8-1A0A0A6YYK1 113 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 C7orf71A4D174 169 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 A8MU10 97 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 GGTLC3B5MD39 225 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 ANKRD65E5RJM6 399 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 TSTD3H0UI37 97 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 H7C1H1 209 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 EIF3GO75821 320 aaKnown RBP eCLIP2.21□□□□□ -2.06
LRCH3-217ENST00000483442 CFDP00746 253 aaPredicted RBP2.21□□□□□ -2.06
LRCH3-217ENST00000483442 SLC25A5P05141 298 aaKnown RBP2.21□□□□□ -2.06
LRCH3-217ENST00000483442 GPX1P07203 203 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 PFN1P07737 140 aaKnown RBP2.21□□□□□ -2.06
LRCH3-217ENST00000483442 OR5AL1P0C617 328 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 RPL7P18124 248 aaKnown RBP2.21□□□□□ -2.06
LRCH3-217ENST00000483442 RPL12P30050 165 aaKnown RBP2.21□□□□□ -2.06
LRCH3-217ENST00000483442 S100A7P31151 101 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 PRSS3P35030 304 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 RCVRNP35243 200 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 MXD1Q05195 221 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 ERCC8Q13216 396 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 BTN1A1Q13410 526 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 ZNF726P1Q15940 193 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 MUC21Q5SSG8 566 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 C1orf195Q5TG92 126 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 Q6ZQT7 251 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 MRPL55Q7Z7F7 128 aaKnown RBP2.21□□□□□ -2.06
LRCH3-217ENST00000483442 NIT1Q86X76 327 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 OR10P1Q8NGE3 313 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 S100A16Q96FQ6 103 aaKnown RBP2.21□□□□□ -2.06
LRCH3-217ENST00000483442 SFRP2Q96HF1 295 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 LINC00477Q96M19 166 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 SIGMAR1Q99720 223 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 SHANK2-AS3Q9BTD1 123 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 OCR1Q9BZK8 76 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 COPZ2Q9P299 210 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 SSR3Q9UNL2 185 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 HIGD1AQ9Y241 93 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 TPRKBQ9Y3C4 175 aa2.21□□□□□ -2.06
LRCH3-217ENST00000483442 IGHV1OR15-1A0A075B7D0 117 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 E9PLD3 99 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 H3BRN7 92 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 PHOX2AO14813 284 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 HYPMO75409 117 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 CDS2O95674 445 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 IL5P05113 134 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 SDC2P34741 201 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 SULT1A1P50225 295 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 SULT1A2P50226 295 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 RPL18AQ02543 176 aaKnown RBP2.2□□□□□ -2.06
LRCH3-217ENST00000483442 PRR4Q16378 134 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 IBA57Q5T440 356 aaKnown RBP2.2□□□□□ -2.06
LRCH3-217ENST00000483442 REG3GQ6UW15 175 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 DPPA3Q6W0C5 159 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 SDIM1Q6ZPB5 146 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 FAM19A5Q7Z5A7 132 aaPredicted RBP2.2□□□□□ -2.06
LRCH3-217ENST00000483442 Q8N377 158 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 SMIM20Q8N5G0 67 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 OR10G4Q8NGN3 311 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 LHFPL5Q8TAF8 219 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 GTSF1Q8WW33 167 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 RMI2Q96E14 147 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 ZC2HC1AQ96GY0 325 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 PGLYRP4Q96LB8 373 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 TMEM222Q9H0R3 208 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 ARV1Q9H2C2 271 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 DUSP21Q9H596 190 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 JPT2Q9H910 190 aa2.2□□□□□ -2.06
LRCH3-217ENST00000483442 ZNF331Q9NQX6 463 aaPredicted RBP2.2□□□□□ -2.06
LRCH3-217ENST00000483442 TXNL4BQ9NX01 149 aaKnown RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms