RNA–Protein interactions for RNA: ENST00000483414.1

LIMK1-205, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 3,374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-205ENST00000483414 G3V4G9 280 aa7.24□□□□□ -1.25
LIMK1-205ENST00000483414 HIST1H1AQ02539 215 aaPredicted RBP7.24□□□□□ -1.25
LIMK1-205ENST00000483414 PDE6HQ13956 83 aa7.24□□□□□ -1.25
LIMK1-205ENST00000483414 DKK2Q9UBU2 259 aa7.24□□□□□ -1.25
LIMK1-205ENST00000483414 AGRNO00468 2067 aa7.24□□□□□ -1.25
LIMK1-205ENST00000483414 K7EMT4 169 aa7.23□□□□□ -1.25
LIMK1-205ENST00000483414 CCL24O00175 119 aa7.23□□□□□ -1.25
LIMK1-205ENST00000483414 WIPF1O43516 503 aa7.23□□□□□ -1.25
LIMK1-205ENST00000483414 INSL3P51460 131 aa7.23□□□□□ -1.25
LIMK1-205ENST00000483414 CIDEAO60543 219 aa7.23□□□□□ -1.25
LIMK1-205ENST00000483414 METTL26Q96S19 204 aa7.23□□□□□ -1.25
LIMK1-205ENST00000483414 MS4A6AQ9H2W1 248 aa7.23□□□□□ -1.25
LIMK1-205ENST00000483414 SMAD5-AS1Q9Y6J3 95 aa7.23□□□□□ -1.25
LIMK1-205ENST00000483414 M0R381 172 aa7.23□□□□□ -1.25
LIMK1-205ENST00000483414 DEFB1P60022 68 aa7.23□□□□□ -1.25
LIMK1-205ENST00000483414 WFDC9Q8NEX5 89 aa7.23□□□□□ -1.25
LIMK1-205ENST00000483414 RPS20P60866 119 aaKnown RBP7.22□□□□□ -1.25
LIMK1-205ENST00000483414 LINC01545Q5VT33 79 aa7.22□□□□□ -1.25
LIMK1-205ENST00000483414 A0A1W2PRX2 142 aa7.22□□□□□ -1.25
LIMK1-205ENST00000483414 CRXO43186 299 aaPredicted RBP7.22□□□□□ -1.25
LIMK1-205ENST00000483414 COX8AP10176 69 aa7.22□□□□□ -1.25
LIMK1-205ENST00000483414 SHISA2Q6UWI4 295 aa7.22□□□□□ -1.25
LIMK1-205ENST00000483414 Q6ZQT7 251 aa7.22□□□□□ -1.25
LIMK1-205ENST00000483414 BUB3O43684 328 aa7.22□□□□□ -1.25
LIMK1-205ENST00000483414 WFDC2Q14508 124 aa7.22□□□□□ -1.25
LIMK1-205ENST00000483414 GTSCR1Q86UQ5 136 aa7.22□□□□□ -1.25
LIMK1-205ENST00000483414 TNFRSF6BO95407 300 aa7.21□□□□□ -1.25
LIMK1-205ENST00000483414 FXYD2P54710 66 aa7.21□□□□□ -1.25
LIMK1-205ENST00000483414 AGPAT4-IT1Q9H0P7 198 aa7.21□□□□□ -1.25
LIMK1-205ENST00000483414 DNAH9Q9NYC9 4486 aa7.21□□□□□ -1.26
LIMK1-205ENST00000483414 H3BVH4 76 aa7.21□□□□□ -1.26
LIMK1-205ENST00000483414 MGPP08493 103 aa7.21□□□□□ -1.26
LIMK1-205ENST00000483414 UFSP1Q6NVU6 142 aa7.21□□□□□ -1.26
LIMK1-205ENST00000483414 GTF2H5Q6ZYL4 71 aa7.21□□□□□ -1.26
LIMK1-205ENST00000483414 OR9G4Q8NGQ1 327 aa7.21□□□□□ -1.26
LIMK1-205ENST00000483414 C9orf118A6NHY6 69 aa7.2□□□□□ -1.26
LIMK1-205ENST00000483414 K7EP34 96 aa7.2□□□□□ -1.26
LIMK1-205ENST00000483414 SYNJ2BPP57105 145 aa7.2□□□□□ -1.26
LIMK1-205ENST00000483414 NSUN5P1Q3KNT7 163 aa7.2□□□□□ -1.26
LIMK1-205ENST00000483414 ETDBQ3ZM63 59 aa7.2□□□□□ -1.26
LIMK1-205ENST00000483414 A6NDN8 102 aa7.2□□□□□ -1.26
LIMK1-205ENST00000483414 SOCS3O14543 225 aa7.2□□□□□ -1.26
LIMK1-205ENST00000483414 DAZ1Q9NQZ3 744 aaKnown RBP7.2□□□□□ -1.26
LIMK1-205ENST00000483414 NHP2Q9NX24 153 aaKnown RBP7.2□□□□□ -1.26
LIMK1-205ENST00000483414 HUWE1Q7Z6Z7 4374 aaKnown RBP7.2□□□□□ -1.26
LIMK1-205ENST00000483414 IGHV7-4-1A0A0J9YVY3 117 aa7.2□□□□□ -1.26
LIMK1-205ENST00000483414 KHDC1LQ5JSQ8 128 aa7.2□□□□□ -1.26
LIMK1-205ENST00000483414 IGKV2D-26A0A0A0MRZ7 120 aa7.19□□□□□ -1.26
LIMK1-205ENST00000483414 TRAV26-1A0A087WT03 109 aa7.19□□□□□ -1.26
LIMK1-205ENST00000483414 H3BMG7 143 aa7.19□□□□□ -1.26
LIMK1-205ENST00000483414 SMPXQ9UHP9 88 aa7.19□□□□□ -1.26
LIMK1-205ENST00000483414 A0A096LNJ9 63 aa7.19□□□□□ -1.26
LIMK1-205ENST00000483414 IGKV3-20P01619 116 aa7.19□□□□□ -1.26
LIMK1-205ENST00000483414 FGF6P10767 208 aa7.19□□□□□ -1.26
LIMK1-205ENST00000483414 ZNF493Q6ZR52 646 aa7.19□□□□□ -1.26
LIMK1-205ENST00000483414 CHTOPQ9Y3Y2 248 aaKnown RBP7.19□□□□□ -1.26
LIMK1-205ENST00000483414 TRBV6-1A0A0K0K1D8 114 aa7.18□□□□□ -1.26
LIMK1-205ENST00000483414 A0A1W2PPM0 123 aa7.18□□□□□ -1.26
LIMK1-205ENST00000483414 SAMD5Q5TGI4 173 aa7.18□□□□□ -1.26
LIMK1-205ENST00000483414 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.18□□□□□ -1.26
LIMK1-205ENST00000483414 F6UB75 175 aa7.18□□□□□ -1.26
LIMK1-205ENST00000483414 RNASE4P34096 147 aaKnown RBP7.18□□□□□ -1.26
LIMK1-205ENST00000483414 ZC2HC1BQ5TFG8 222 aa7.18□□□□□ -1.26
LIMK1-205ENST00000483414 IGLV1-51P01701 117 aa7.17□□□□□ -1.26
LIMK1-205ENST00000483414 SMIM17P0DL12 118 aa7.17□□□□□ -1.26
LIMK1-205ENST00000483414 LGALS9BQ3B8N2 356 aa7.17□□□□□ -1.26
LIMK1-205ENST00000483414 LGALS9CQ6DKI2 356 aa7.17□□□□□ -1.26
LIMK1-205ENST00000483414 SLC50A1Q9BRV3 221 aa7.17□□□□□ -1.26
LIMK1-205ENST00000483414 IGKV3D-20A0A0C4DH25 116 aa7.17□□□□□ -1.26
LIMK1-205ENST00000483414 F5H697 171 aa7.17□□□□□ -1.26
LIMK1-205ENST00000483414 DCANP1Q8TF63 244 aa7.17□□□□□ -1.26
LIMK1-205ENST00000483414 PHLDA3Q9Y5J5 127 aa7.17□□□□□ -1.26
LIMK1-205ENST00000483414 FABP2P12104 132 aa7.17□□□□□ -1.26
LIMK1-205ENST00000483414 ANXA2RQ3ZCQ2 193 aa7.17□□□□□ -1.26
LIMK1-205ENST00000483414 C14orf178Q8N769 122 aaPredicted RBP7.17□□□□□ -1.26
LIMK1-205ENST00000483414 NXT2Q9NPJ8 142 aaKnown RBP7.17□□□□□ -1.26
LIMK1-205ENST00000483414 C11orf21Q9P2W6 132 aa7.17□□□□□ -1.26
LIMK1-205ENST00000483414 OVOL1O14753 267 aa7.16□□□□□ -1.26
LIMK1-205ENST00000483414 IGKCP01834 107 aa7.16□□□□□ -1.26
LIMK1-205ENST00000483414 HSD52Q0P140 79 aa7.16□□□□□ -1.26
LIMK1-205ENST00000483414 NEGR1Q7Z3B1 354 aa7.16□□□□□ -1.26
LIMK1-205ENST00000483414 C3orf56Q8N813 242 aa7.16□□□□□ -1.26
LIMK1-205ENST00000483414 OR10J6PQ8NGY7 276 aa7.16□□□□□ -1.26
LIMK1-205ENST00000483414 ZNF256Q9Y2P7 627 aaPredicted RBP7.16□□□□□ -1.26
LIMK1-205ENST00000483414 DEFB114Q30KQ6 69 aa7.16□□□□□ -1.26
LIMK1-205ENST00000483414 TRAV8-2A0A0B4J237 113 aa7.16□□□□□ -1.26
LIMK1-205ENST00000483414 IGLC6P0CF74 106 aa7.16□□□□□ -1.26
LIMK1-205ENST00000483414 HTN1P15515 57 aa7.16□□□□□ -1.26
LIMK1-205ENST00000483414 SEC11AP67812 179 aa7.16□□□□□ -1.26
LIMK1-205ENST00000483414 RHPN1-AS1Q9BWJ2 59 aa7.16□□□□□ -1.26
LIMK1-205ENST00000483414 H3BRM9 83 aa7.15□□□□□ -1.26
LIMK1-205ENST00000483414 RNF185Q96GF1 192 aa7.15□□□□□ -1.26
LIMK1-205ENST00000483414 SIGMAR1Q99720 223 aa7.15□□□□□ -1.26
LIMK1-205ENST00000483414 GAGE12HA6NDE8 117 aa7.15□□□□□ -1.27
LIMK1-205ENST00000483414 CKS1BP61024 79 aa7.15□□□□□ -1.27
LIMK1-205ENST00000483414 EGFEM1PQ0D2K5 195 aa7.15□□□□□ -1.27
LIMK1-205ENST00000483414 C20orf78Q9BR46 151 aa7.15□□□□□ -1.27
LIMK1-205ENST00000483414 MRPL35Q9NZE8 188 aaKnown RBP7.15□□□□□ -1.27
LIMK1-205ENST00000483414 DNAH7Q8WXX0 4024 aa7.15□□□□□ -1.27
LIMK1-205ENST00000483414 NBEAL1Q6ZS30 2694 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms