RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 VSIG2Q96IQ7 327 aa12.48□□□□□ -0.41
CPNE1-224ENST00000483359 AP1S3Q96PC3 154 aa12.48□□□□□ -0.41
CPNE1-224ENST00000483359 PRO0255Q9UI72 69 aa12.48□□□□□ -0.41
CPNE1-224ENST00000483359 PAX4O43316 350 aa12.47□□□□□ -0.41
CPNE1-224ENST00000483359 CRYGDP07320 174 aa12.47□□□□□ -0.41
CPNE1-224ENST00000483359 CRYBA4P53673 196 aa12.47□□□□□ -0.41
CPNE1-224ENST00000483359 APLNQ9ULZ1 77 aa12.47□□□□□ -0.41
CPNE1-224ENST00000483359 MT-ND4LP03901 98 aa12.47□□□□□ -0.41
CPNE1-224ENST00000483359 UFSP1Q6NVU6 142 aa12.47□□□□□ -0.41
CPNE1-224ENST00000483359 NUP35Q8NFH5 326 aa12.47□□□□□ -0.41
CPNE1-224ENST00000483359 GATA1P15976 413 aaPredicted RBP12.46□□□□□ -0.41
CPNE1-224ENST00000483359 FOXA3P55318 350 aaPredicted RBP12.46□□□□□ -0.41
CPNE1-224ENST00000483359 C10orf91Q5T1B1 145 aa12.46□□□□□ -0.41
CPNE1-224ENST00000483359 Q6ZSN1 163 aa12.46□□□□□ -0.41
CPNE1-224ENST00000483359 BORCS7Q96B45 105 aa12.46□□□□□ -0.41
CPNE1-224ENST00000483359 FAM210BQ96KR6 192 aa12.46□□□□□ -0.41
CPNE1-224ENST00000483359 CNFNQ9BYD5 112 aa12.46□□□□□ -0.41
CPNE1-224ENST00000483359 NAT8BQ9UHF3 227 aa12.46□□□□□ -0.41
CPNE1-224ENST00000483359 CARHSP1Q9Y2V2 147 aaKnown RBP12.46□□□□□ -0.41
CPNE1-224ENST00000483359 FAM231BA6NCW3 169 aa12.45□□□□□ -0.42
CPNE1-224ENST00000483359 RHODO00212 210 aa12.45□□□□□ -0.42
CPNE1-224ENST00000483359 PPP1R2P9O14990 202 aa12.45□□□□□ -0.42
CPNE1-224ENST00000483359 SMIM17P0DL12 118 aa12.45□□□□□ -0.42
CPNE1-224ENST00000483359 EVI2AP22794 236 aa12.45□□□□□ -0.42
CPNE1-224ENST00000483359 ZNF56Q15929 161 aa12.45□□□□□ -0.42
CPNE1-224ENST00000483359 ZFP2Q6ZN57 461 aa12.45□□□□□ -0.42
CPNE1-224ENST00000483359 SLC25A29Q8N8R3 303 aa12.45□□□□□ -0.42
CPNE1-224ENST00000483359 LOC100131303A0A0U1RQF7 123 aa12.45□□□□□ -0.42
CPNE1-224ENST00000483359 SMIM27A0A1W2PRY6 76 aa12.45□□□□□ -0.42
CPNE1-224ENST00000483359 APOC3P02656 99 aa12.45□□□□□ -0.42
CPNE1-224ENST00000483359 ANAPC16Q96DE5 110 aa12.45□□□□□ -0.42
CPNE1-224ENST00000483359 MGPP08493 103 aa12.44□□□□□ -0.42
CPNE1-224ENST00000483359 SLAQ13239 276 aa12.44□□□□□ -0.42
CPNE1-224ENST00000483359 A0A096LPF7 62 aa12.43□□□□□ -0.42
CPNE1-224ENST00000483359 A0A1B0GUT8 65 aa12.43□□□□□ -0.42
CPNE1-224ENST00000483359 CIDEAO60543 219 aa12.43□□□□□ -0.42
CPNE1-224ENST00000483359 TRGC1P0CF51 173 aa12.43□□□□□ -0.42
CPNE1-224ENST00000483359 C15orf53Q8NAA6 179 aa12.43□□□□□ -0.42
CPNE1-224ENST00000483359 F5H697 171 aa12.43□□□□□ -0.42
CPNE1-224ENST00000483359 GYPEP15421 78 aa12.43□□□□□ -0.42
CPNE1-224ENST00000483359 KIF25-AS1Q9Y6Z4 181 aa12.43□□□□□ -0.42
CPNE1-224ENST00000483359 FAM3BP58499 235 aaPredicted RBP12.42□□□□□ -0.42
CPNE1-224ENST00000483359 RHOHQ15669 191 aa12.42□□□□□ -0.42
CPNE1-224ENST00000483359 WDR73Q6P4I2 378 aa12.42□□□□□ -0.42
CPNE1-224ENST00000483359 TRBV6-4A0A1B0GX49 114 aa12.41□□□□□ -0.42
CPNE1-224ENST00000483359 K7EQD1 137 aa12.41□□□□□ -0.42
CPNE1-224ENST00000483359 P0DMU3 169 aa12.41□□□□□ -0.42
CPNE1-224ENST00000483359 FAM231AP0DMU4 169 aa12.41□□□□□ -0.42
CPNE1-224ENST00000483359 FAM231CP0DMU5 169 aa12.41□□□□□ -0.42
CPNE1-224ENST00000483359 TCTAP57738 103 aa12.41□□□□□ -0.42
CPNE1-224ENST00000483359 MRPL54Q6P161 138 aaKnown RBP12.41□□□□□ -0.42
CPNE1-224ENST00000483359 CLRN3Q8NCR9 226 aa12.41□□□□□ -0.42
CPNE1-224ENST00000483359 PRADC1Q9BSG0 188 aa12.41□□□□□ -0.42
CPNE1-224ENST00000483359 Q9UF83 564 aa12.41□□□□□ -0.42
CPNE1-224ENST00000483359 ICOSQ9Y6W8 199 aa12.41□□□□□ -0.42
CPNE1-224ENST00000483359 H3BNG1 76 aa12.4□□□□□ -0.42
CPNE1-224ENST00000483359 DPH3P1Q9H4G8 78 aa12.4□□□□□ -0.42
CPNE1-224ENST00000483359 C7orf77A4D0Y5 90 aa12.39□□□□□ -0.43
CPNE1-224ENST00000483359 LINC00315P59091 139 aa12.39□□□□□ -0.43
CPNE1-224ENST00000483359 RPS10P5Q9NQ39 176 aa12.39□□□□□ -0.43
CPNE1-224ENST00000483359 KMT2CQ8NEZ4 4911 aaKnown RBP12.39□□□□□ -0.43
CPNE1-224ENST00000483359 SRIP30626 198 aa12.39□□□□□ -0.43
CPNE1-224ENST00000483359 CAMPP49913 170 aa12.39□□□□□ -0.43
CPNE1-224ENST00000483359 CTAG1AP78358 180 aa12.39□□□□□ -0.43
CPNE1-224ENST00000483359 RIGQ13278 110 aa12.39□□□□□ -0.43
CPNE1-224ENST00000483359 SMIM15Q7Z3B0 74 aa12.39□□□□□ -0.43
CPNE1-224ENST00000483359 RAB4BP61018 213 aa12.38□□□□□ -0.43
CPNE1-224ENST00000483359 SVBPQ8N300 66 aa12.38□□□□□ -0.43
CPNE1-224ENST00000483359 GAGE12JA6NER3 117 aa12.38□□□□□ -0.43
CPNE1-224ENST00000483359 LY6G6CO95867 125 aa12.38□□□□□ -0.43
CPNE1-224ENST00000483359 GAGE1Q13065 139 aa12.38□□□□□ -0.43
CPNE1-224ENST00000483359 GAGE4Q13068 117 aa12.38□□□□□ -0.43
CPNE1-224ENST00000483359 GAGE5Q13069 117 aa12.38□□□□□ -0.43
CPNE1-224ENST00000483359 RHEBQ15382 184 aa12.38□□□□□ -0.43
CPNE1-224ENST00000483359 MRPL23Q16540 153 aaKnown RBP12.38□□□□□ -0.43
CPNE1-224ENST00000483359 GAGE13Q4V321 117 aa12.38□□□□□ -0.43
CPNE1-224ENST00000483359 CTDSP1Q9GZU7 261 aa12.38□□□□□ -0.43
CPNE1-224ENST00000483359 TRAV26-2A0A0B4J265 109 aa12.37□□□□□ -0.43
CPNE1-224ENST00000483359 SUMO4Q6EEV6 95 aa12.37□□□□□ -0.43
CPNE1-224ENST00000483359 ALMS1Q8TCU4 4167 aa12.37□□□□□ -0.43
CPNE1-224ENST00000483359 UBE2DNLQ8IWF7 75 aa12.36□□□□□ -0.43
CPNE1-224ENST00000483359 LINC00476Q8WZB0 136 aa12.36□□□□□ -0.43
CPNE1-224ENST00000483359 URGCP-MRPS24S4R325 110 aa12.36□□□□□ -0.43
CPNE1-224ENST00000483359 SNAPINO95295 136 aa12.36□□□□□ -0.43
CPNE1-224ENST00000483359 AMN1Q8IY45 258 aa12.35□□□□□ -0.43
CPNE1-224ENST00000483359 TMEM191AQ9H0A3 160 aa12.35□□□□□ -0.43
CPNE1-224ENST00000483359 SACSQ9NZJ4 4579 aa12.35□□□□□ -0.43
CPNE1-224ENST00000483359 HBBP68871 147 aa12.34□□□□□ -0.43
CPNE1-224ENST00000483359 NEGR1Q7Z3B1 354 aa12.34□□□□□ -0.43
CPNE1-224ENST00000483359 ZNRF2Q8NHG8 242 aa12.34□□□□□ -0.43
CPNE1-224ENST00000483359 ESRGQ1W209 222 aa12.34□□□□□ -0.43
CPNE1-224ENST00000483359 KCNIP4Q6PIL6 250 aa12.34□□□□□ -0.43
CPNE1-224ENST00000483359 DNAH1Q9P2D7 4330 aa12.33□□□□□ -0.43
CPNE1-224ENST00000483359 A0A087WWC5 75 aa12.33□□□□□ -0.44
CPNE1-224ENST00000483359 A0A1B0GXF2 115 aa12.33□□□□□ -0.44
CPNE1-224ENST00000483359 M0QY20 66 aa12.33□□□□□ -0.44
CPNE1-224ENST00000483359 NEXN-AS1Q8NBZ9 246 aa12.33□□□□□ -0.44
CPNE1-224ENST00000483359 VPS13DQ5THJ4 4388 aa12.33□□□□□ -0.44
CPNE1-224ENST00000483359 CCL18P55774 89 aa12.32□□□□□ -0.44
CPNE1-224ENST00000483359 LGALS9CQ6DKI2 356 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms