RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 IGHV3-53P01767 116 aa14.1□□□□□ -0.15
TRAPPC12-220ENST00000482645 WDR73Q6P4I2 378 aa14.1□□□□□ -0.15
TRAPPC12-220ENST00000482645 AP1S3Q96PC3 154 aa14.1□□□□□ -0.15
TRAPPC12-220ENST00000482645 TRBV24-1A0A075B6N3 115 aa14.1□□□□□ -0.15
TRAPPC12-220ENST00000482645 TRAV10A0A0B4J240 114 aa14.1□□□□□ -0.15
TRAPPC12-220ENST00000482645 ATP5G1P05496 136 aa14.1□□□□□ -0.15
TRAPPC12-220ENST00000482645 RAB4BP61018 213 aa14.1□□□□□ -0.15
TRAPPC12-220ENST00000482645 RASL10AQ92737 203 aa14.1□□□□□ -0.15
TRAPPC12-220ENST00000482645 FAM210BQ96KR6 192 aa14.1□□□□□ -0.15
TRAPPC12-220ENST00000482645 STARD9Q9P2P6 4700 aa14.09□□□□□ -0.15
TRAPPC12-220ENST00000482645 A0A1B0GW15 77 aa14.09□□□□□ -0.15
TRAPPC12-220ENST00000482645 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC12-220ENST00000482645 JPT2Q9H910 190 aa14.09□□□□□ -0.15
TRAPPC12-220ENST00000482645 F5H768 121 aa14.08□□□□□ -0.16
TRAPPC12-220ENST00000482645 S100A8P05109 93 aa14.08□□□□□ -0.16
TRAPPC12-220ENST00000482645 TRGC1P0CF51 173 aa14.08□□□□□ -0.16
TRAPPC12-220ENST00000482645 PTH2Q96A98 100 aa14.08□□□□□ -0.16
TRAPPC12-220ENST00000482645 NACAE9PAV3 2078 aa14.08□□□□□ -0.16
TRAPPC12-220ENST00000482645 A0A087WWL8 130 aa14.06□□□□□ -0.16
TRAPPC12-220ENST00000482645 NUPR2A6NF83 97 aa14.06□□□□□ -0.16
TRAPPC12-220ENST00000482645 COLCA2A8K830 154 aa14.06□□□□□ -0.16
TRAPPC12-220ENST00000482645 EVI2AP22794 236 aa14.06□□□□□ -0.16
TRAPPC12-220ENST00000482645 FAM74A4Q5TZK3 123 aa14.06□□□□□ -0.16
TRAPPC12-220ENST00000482645 CEMP1Q6PRD7 247 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC12-220ENST00000482645 SMIM15Q7Z3B0 74 aa14.06□□□□□ -0.16
TRAPPC12-220ENST00000482645 C14orf178Q8N769 122 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC12-220ENST00000482645 SMIM17P0DL12 118 aa14.05□□□□□ -0.16
TRAPPC12-220ENST00000482645 PIK3CD-AS1Q5SR53 167 aa14.05□□□□□ -0.16
TRAPPC12-220ENST00000482645 RASL11AQ6T310 242 aa14.05□□□□□ -0.16
TRAPPC12-220ENST00000482645 OR4C5Q8NGB2 326 aa14.05□□□□□ -0.16
TRAPPC12-220ENST00000482645 NDUFAF3Q9BU61 184 aa14.05□□□□□ -0.16
TRAPPC12-220ENST00000482645 A8MWV9 139 aa14.05□□□□□ -0.16
TRAPPC12-220ENST00000482645 C3orf84H3BNL1 204 aa14.05□□□□□ -0.16
TRAPPC12-220ENST00000482645 MGPP08493 103 aa14.05□□□□□ -0.16
TRAPPC12-220ENST00000482645 ZNF479Q96JC4 524 aa14.05□□□□□ -0.16
TRAPPC12-220ENST00000482645 C18orf15Q96N68 181 aa14.05□□□□□ -0.16
TRAPPC12-220ENST00000482645 SAMD10Q9BYL1 202 aa14.05□□□□□ -0.16
TRAPPC12-220ENST00000482645 IGLL5B9A064 214 aa14.04□□□□□ -0.16
TRAPPC12-220ENST00000482645 HOXA5P20719 270 aa14.04□□□□□ -0.16
TRAPPC12-220ENST00000482645 CASC10Q5T4H9 136 aa14.04□□□□□ -0.16
TRAPPC12-220ENST00000482645 CFAP126Q5VTH2 177 aa14.04□□□□□ -0.16
TRAPPC12-220ENST00000482645 TMEM136Q6ZRR5 245 aa14.04□□□□□ -0.16
TRAPPC12-220ENST00000482645 POM121L12Q8N7R1 296 aa14.04□□□□□ -0.16
TRAPPC12-220ENST00000482645 TMEM191AQ9H0A3 160 aa14.04□□□□□ -0.16
TRAPPC12-220ENST00000482645 DPH3P1Q9H4G8 78 aa14.04□□□□□ -0.16
TRAPPC12-220ENST00000482645 IGHV3-73A0A0B4J1V6 119 aa14.03□□□□□ -0.16
TRAPPC12-220ENST00000482645 TRAV4A0A0B4J268 109 aa14.03□□□□□ -0.16
TRAPPC12-220ENST00000482645 AMN1Q8IY45 258 aa14.03□□□□□ -0.16
TRAPPC12-220ENST00000482645 KLK5Q9Y337 293 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC12-220ENST00000482645 DYNC2H1Q8NCM8 4307 aaKnown RBP14.03□□□□□ -0.16
TRAPPC12-220ENST00000482645 TRGV4A0A0C4DH28 118 aa14.02□□□□□ -0.16
TRAPPC12-220ENST00000482645 RS1O15537 224 aa14.02□□□□□ -0.16
TRAPPC12-220ENST00000482645 RAB5AP20339 215 aa14.02□□□□□ -0.16
TRAPPC12-220ENST00000482645 GATD1Q8NB37 220 aa14.02□□□□□ -0.16
TRAPPC12-220ENST00000482645 HLA-DQA1P01909 254 aa14.01□□□□□ -0.17
TRAPPC12-220ENST00000482645 CRYGDP07320 174 aa14.01□□□□□ -0.17
TRAPPC12-220ENST00000482645 RPS10P46783 165 aaKnown RBP14.01□□□□□ -0.17
TRAPPC12-220ENST00000482645 ZNF56Q15929 161 aa14.01□□□□□ -0.17
TRAPPC12-220ENST00000482645 COX19Q49B96 90 aa14.01□□□□□ -0.17
TRAPPC12-220ENST00000482645 FRZBQ92765 325 aa14.01□□□□□ -0.17
TRAPPC12-220ENST00000482645 GNB1LQ9BYB4 327 aa14.01□□□□□ -0.17
TRAPPC12-220ENST00000482645 A0A0J9YY99 117 aa14□□□□□ -0.17
TRAPPC12-220ENST00000482645 KIF25-AS1Q9Y6Z4 181 aa14□□□□□ -0.17
TRAPPC12-220ENST00000482645 MT-ND6P03923 174 aa14□□□□□ -0.17
TRAPPC12-220ENST00000482645 SLAQ13239 276 aa14□□□□□ -0.17
TRAPPC12-220ENST00000482645 MRPL18Q9H0U6 180 aaKnown RBP14□□□□□ -0.17
TRAPPC12-220ENST00000482645 TRAPPC1Q9Y5R8 145 aa14□□□□□ -0.17
TRAPPC12-220ENST00000482645 TRAV26-1A0A087WT03 109 aa13.99□□□□□ -0.17
TRAPPC12-220ENST00000482645 F5H697 171 aa13.99□□□□□ -0.17
TRAPPC12-220ENST00000482645 RHODO00212 210 aa13.99□□□□□ -0.17
TRAPPC12-220ENST00000482645 FHL2Q14192 279 aa13.99□□□□□ -0.17
TRAPPC12-220ENST00000482645 FAM104BQ5XKR9 115 aa13.99□□□□□ -0.17
TRAPPC12-220ENST00000482645 UFSP1Q6NVU6 142 aa13.99□□□□□ -0.17
TRAPPC12-220ENST00000482645 PLECQ15149 4684 aaKnown RBP13.98□□□□□ -0.17
TRAPPC12-220ENST00000482645 TRAV26-2A0A0B4J265 109 aa13.98□□□□□ -0.17
TRAPPC12-220ENST00000482645 APCSP02743 223 aa13.98□□□□□ -0.17
TRAPPC12-220ENST00000482645 RNF185Q96GF1 192 aa13.98□□□□□ -0.17
TRAPPC12-220ENST00000482645 TENM2Q9NT68 2774 aa13.97□□□□□ -0.17
TRAPPC12-220ENST00000482645 RAB4AP20338 218 aa13.97□□□□□ -0.17
TRAPPC12-220ENST00000482645 HHLA3Q9XRX5 114 aa13.97□□□□□ -0.17
TRAPPC12-220ENST00000482645 NCR2O95944 276 aa13.96□□□□□ -0.17
TRAPPC12-220ENST00000482645 LINC00315P59091 139 aa13.96□□□□□ -0.17
TRAPPC12-220ENST00000482645 FABP9Q0Z7S8 132 aa13.96□□□□□ -0.17
TRAPPC12-220ENST00000482645 MRPL51Q4U2R6 128 aaKnown RBP13.96□□□□□ -0.17
TRAPPC12-220ENST00000482645 SUMO4Q6EEV6 95 aa13.96□□□□□ -0.17
TRAPPC12-220ENST00000482645 ZFP2Q6ZN57 461 aa13.96□□□□□ -0.17
TRAPPC12-220ENST00000482645 KIAA1644Q3SXP7 199 aa13.95□□□□□ -0.18
TRAPPC12-220ENST00000482645 PRO0255Q9UI72 69 aa13.95□□□□□ -0.18
TRAPPC12-220ENST00000482645 SMKR1H3BMG3 65 aa13.95□□□□□ -0.18
TRAPPC12-220ENST00000482645 PAX4O43316 350 aa13.95□□□□□ -0.18
TRAPPC12-220ENST00000482645 NUDT3O95989 172 aa13.95□□□□□ -0.18
TRAPPC12-220ENST00000482645 TRGC2P03986 189 aa13.94□□□□□ -0.18
TRAPPC12-220ENST00000482645 CRYBA4P53673 196 aa13.94□□□□□ -0.18
TRAPPC12-220ENST00000482645 D6R8Y8 96 aa13.93□□□□□ -0.18
TRAPPC12-220ENST00000482645 CIDEAO60543 219 aa13.93□□□□□ -0.18
TRAPPC12-220ENST00000482645 GATA1P15976 413 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC12-220ENST00000482645 Q6ZSN1 163 aa13.93□□□□□ -0.18
TRAPPC12-220ENST00000482645 MRAP2Q96G30 205 aa13.93□□□□□ -0.18
TRAPPC12-220ENST00000482645 VSIG2Q96IQ7 327 aa13.93□□□□□ -0.18
TRAPPC12-220ENST00000482645 LYSTQ99698 3801 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms