RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 A0A1B0GV50 99 aa12.33□□□□□ -0.44
CLK1-211ENST00000481641 M0R381 172 aa12.33□□□□□ -0.44
CLK1-211ENST00000481641 PAGE4O60829 102 aa12.33□□□□□ -0.44
CLK1-211ENST00000481641 LTAP01374 205 aa12.33□□□□□ -0.44
CLK1-211ENST00000481641 NTN5Q8WTR8 489 aaPredicted RBP12.33□□□□□ -0.44
CLK1-211ENST00000481641 FRZBQ92765 325 aa12.33□□□□□ -0.44
CLK1-211ENST00000481641 PHLDA3Q9Y5J5 127 aa12.33□□□□□ -0.44
CLK1-211ENST00000481641 TRBV6-1A0A0K0K1D8 114 aa12.32□□□□□ -0.44
CLK1-211ENST00000481641 LECT2O14960 151 aa12.32□□□□□ -0.44
CLK1-211ENST00000481641 AKR1C3P42330 323 aa12.32□□□□□ -0.44
CLK1-211ENST00000481641 LAGE3Q14657 143 aa12.32□□□□□ -0.44
CLK1-211ENST00000481641 LINC01559Q495D7 138 aa12.32□□□□□ -0.44
CLK1-211ENST00000481641 STOML3Q8TAV4 291 aa12.32□□□□□ -0.44
CLK1-211ENST00000481641 SFRP2Q96HF1 295 aa12.32□□□□□ -0.44
CLK1-211ENST00000481641 FAM30AQ9NZY2 134 aa12.32□□□□□ -0.44
CLK1-211ENST00000481641 RHODO00212 210 aa12.31□□□□□ -0.44
CLK1-211ENST00000481641 TPT1P13693 172 aaKnown RBP12.31□□□□□ -0.44
CLK1-211ENST00000481641 KCNRGQ8N5I3 272 aa12.31□□□□□ -0.44
CLK1-211ENST00000481641 DNAJC30Q96LL9 226 aa12.31□□□□□ -0.44
CLK1-211ENST00000481641 TM2D2Q9BX73 214 aa12.31□□□□□ -0.44
CLK1-211ENST00000481641 FAM213BQ8TBF2 198 aa12.3□□□□□ -0.44
CLK1-211ENST00000481641 SFT2D1Q8WV19 159 aa12.3□□□□□ -0.44
CLK1-211ENST00000481641 HERC1Q15751 4861 aa12.29□□□□□ -0.44
CLK1-211ENST00000481641 A0A087WWC5 75 aa12.29□□□□□ -0.44
CLK1-211ENST00000481641 RPL19P84098 196 aaKnown RBP12.29□□□□□ -0.44
CLK1-211ENST00000481641 TCEAL7Q9BRU2 100 aa12.29□□□□□ -0.44
CLK1-211ENST00000481641 TMEM70Q9BUB7 260 aa12.29□□□□□ -0.44
CLK1-211ENST00000481641 SRRM2Q9UQ35 2752 aaKnown RBP12.28□□□□□ -0.44
CLK1-211ENST00000481641 TRAV8-3A0A0A6YYJ7 113 aa12.28□□□□□ -0.44
CLK1-211ENST00000481641 SCO2A0A1W2PP80 73 aa12.28□□□□□ -0.44
CLK1-211ENST00000481641 ZFP82Q8N141 532 aa12.28□□□□□ -0.44
CLK1-211ENST00000481641 MBD3L1Q8WWY6 194 aa12.28□□□□□ -0.44
CLK1-211ENST00000481641 FLG2Q5D862 2391 aaPredicted RBP12.28□□□□□ -0.44
CLK1-211ENST00000481641 SEC11BP0C7V7 166 aa12.27□□□□□ -0.45
CLK1-211ENST00000481641 ZNF345Q14585 488 aa12.27□□□□□ -0.45
CLK1-211ENST00000481641 NIT1Q86X76 327 aa12.27□□□□□ -0.45
CLK1-211ENST00000481641 BAALCQ8WXS3 180 aa12.27□□□□□ -0.45
CLK1-211ENST00000481641 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.26□□□□□ -0.45
CLK1-211ENST00000481641 ZNF471Q9BX82 626 aaPredicted RBP12.26□□□□□ -0.45
CLK1-211ENST00000481641 KLK12Q9UKR0 248 aa12.26□□□□□ -0.45
CLK1-211ENST00000481641 MUC21A0A0G2JKD1 596 aa12.25□□□□□ -0.45
CLK1-211ENST00000481641 MUC21A0A140T8X8 626 aa12.25□□□□□ -0.45
CLK1-211ENST00000481641 TOR2AQ5JU69 321 aa12.25□□□□□ -0.45
CLK1-211ENST00000481641 OR10AG1Q8NH19 301 aa12.25□□□□□ -0.45
CLK1-211ENST00000481641 URGCP-MRPS24S4R325 110 aa12.25□□□□□ -0.45
CLK1-211ENST00000481641 MYCBP2O75592 4640 aa12.24□□□□□ -0.45
CLK1-211ENST00000481641 UMAD1C9J7I0 102 aa12.24□□□□□ -0.45
CLK1-211ENST00000481641 FAM229AH3BQW9 127 aa12.24□□□□□ -0.45
CLK1-211ENST00000481641 BCL2L11O43521 198 aa12.24□□□□□ -0.45
CLK1-211ENST00000481641 UBE2D3P61077 147 aa12.24□□□□□ -0.45
CLK1-211ENST00000481641 UBE2D2P62837 147 aa12.24□□□□□ -0.45
CLK1-211ENST00000481641 BAGE2Q86Y30 109 aa12.24□□□□□ -0.45
CLK1-211ENST00000481641 DMBT1Q9UGM3 2413 aaPredicted RBP12.23□□□□□ -0.45
CLK1-211ENST00000481641 IGKV2D-24A0A075B6R9 120 aa12.23□□□□□ -0.45
CLK1-211ENST00000481641 KANTRA0A1W2PQU2 76 aa12.23□□□□□ -0.45
CLK1-211ENST00000481641 HMSDA8MTL9 139 aa12.23□□□□□ -0.45
CLK1-211ENST00000481641 SSTP61278 116 aa12.23□□□□□ -0.45
CLK1-211ENST00000481641 RPL36AP83881 106 aaKnown RBP12.23□□□□□ -0.45
CLK1-211ENST00000481641 LINC01620Q4KN68 170 aa12.23□□□□□ -0.45
CLK1-211ENST00000481641 PRR27Q6MZM9 219 aa12.23□□□□□ -0.45
CLK1-211ENST00000481641 RPL36ALQ969Q0 106 aaKnown RBP12.23□□□□□ -0.45
CLK1-211ENST00000481641 MLST8Q9BVC4 326 aa12.23□□□□□ -0.45
CLK1-211ENST00000481641 TRBV7-3A0A075B6L6 115 aa12.22□□□□□ -0.45
CLK1-211ENST00000481641 A0A0D9SG52 128 aa12.22□□□□□ -0.45
CLK1-211ENST00000481641 TRBV10-1A0A0K0K1A3 114 aa12.22□□□□□ -0.45
CLK1-211ENST00000481641 PFDN1O60925 122 aa12.22□□□□□ -0.45
CLK1-211ENST00000481641 S100A9P06702 114 aaKnown RBP12.22□□□□□ -0.45
CLK1-211ENST00000481641 H2AFB1P0C5Y9 115 aa12.22□□□□□ -0.45
CLK1-211ENST00000481641 ZNF56Q15929 161 aa12.22□□□□□ -0.45
CLK1-211ENST00000481641 UBE2WQ96B02 151 aa12.22□□□□□ -0.45
CLK1-211ENST00000481641 A0A087WX48 190 aa12.21□□□□□ -0.45
CLK1-211ENST00000481641 CCL20P78556 96 aa12.21□□□□□ -0.45
CLK1-211ENST00000481641 TMUB2Q71RG4 321 aa12.21□□□□□ -0.45
CLK1-211ENST00000481641 NEXN-AS1Q8NBZ9 246 aa12.21□□□□□ -0.45
CLK1-211ENST00000481641 RAB4BP61018 213 aa12.2□□□□□ -0.46
CLK1-211ENST00000481641 OR10G8Q8NGN5 311 aa12.2□□□□□ -0.46
CLK1-211ENST00000481641 RMI2Q96E14 147 aa12.2□□□□□ -0.46
CLK1-211ENST00000481641 COX11Q9Y6N1 276 aa12.2□□□□□ -0.46
CLK1-211ENST00000481641 TMEM262E9PQX1 116 aa12.19□□□□□ -0.46
CLK1-211ENST00000481641 SNAI2O43623 268 aa12.19□□□□□ -0.46
CLK1-211ENST00000481641 C1QBP02746 253 aa12.19□□□□□ -0.46
CLK1-211ENST00000481641 CXCL1P09341 107 aa12.19□□□□□ -0.46
CLK1-211ENST00000481641 SPANXN1Q5VSR9 72 aa12.19□□□□□ -0.46
CLK1-211ENST00000481641 DERL1Q9BUN8 251 aa12.19□□□□□ -0.46
CLK1-211ENST00000481641 SSBP4Q9BWG4 385 aaPredicted RBP12.19□□□□□ -0.46
CLK1-211ENST00000481641 TRBV6-8A0A0A6YYG3 113 aa12.18□□□□□ -0.46
CLK1-211ENST00000481641 RPL35P42766 123 aaKnown RBP12.18□□□□□ -0.46
CLK1-211ENST00000481641 Q6ZSA8 131 aa12.18□□□□□ -0.46
CLK1-211ENST00000481641 RBFOX3A6NFN3 312 aa12.17□□□□□ -0.46
CLK1-211ENST00000481641 F5H697 171 aa12.17□□□□□ -0.46
CLK1-211ENST00000481641 OR5AL1P0C617 328 aa12.17□□□□□ -0.46
CLK1-211ENST00000481641 KCNIP4Q6PIL6 250 aa12.17□□□□□ -0.46
CLK1-211ENST00000481641 CHCHD7Q9BUK0 85 aa12.17□□□□□ -0.46
CLK1-211ENST00000481641 GNG13Q9P2W3 67 aa12.17□□□□□ -0.46
CLK1-211ENST00000481641 GZMBP10144 247 aa12.16□□□□□ -0.46
CLK1-211ENST00000481641 EIF5AP63241 154 aaKnown RBP12.16□□□□□ -0.46
CLK1-211ENST00000481641 ELOBQ15370 118 aa12.16□□□□□ -0.46
CLK1-211ENST00000481641 MPV17L2Q567V2 206 aa12.16□□□□□ -0.46
CLK1-211ENST00000481641 ENHOQ6UWT2 76 aa12.16□□□□□ -0.46
CLK1-211ENST00000481641 C15orf54Q8N8G6 183 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms