RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 SAMD13Q5VXD3 122 aa10.42□□□□□ -0.74
PHF3-204ENST00000481385 NEXN-AS1Q8NBZ9 246 aa10.42□□□□□ -0.74
PHF3-204ENST00000481385 OR4C5Q8NGB2 326 aa10.42□□□□□ -0.74
PHF3-204ENST00000481385 CHD6Q8TD26 2715 aa10.42□□□□□ -0.74
PHF3-204ENST00000481385 SONP18583 2426 aaKnown RBP10.42□□□□□ -0.74
PHF3-204ENST00000481385 C9orf85Q96MD7 179 aa10.42□□□□□ -0.74
PHF3-204ENST00000481385 PRRC2AP48634 2157 aaKnown RBP10.42□□□□□ -0.74
PHF3-204ENST00000481385 K7EMI3 77 aa10.41□□□□□ -0.74
PHF3-204ENST00000481385 FAM74A4Q5TZK3 123 aa10.41□□□□□ -0.74
PHF3-204ENST00000481385 RNF152Q8N8N0 203 aa10.41□□□□□ -0.74
PHF3-204ENST00000481385 RNASE8Q8TDE3 154 aaKnown RBP10.41□□□□□ -0.74
PHF3-204ENST00000481385 BAALCQ8WXS3 180 aa10.41□□□□□ -0.74
PHF3-204ENST00000481385 CHAC1Q9BUX1 264 aa10.41□□□□□ -0.74
PHF3-204ENST00000481385 TRAV12-1A0A0B4J245 112 aa10.41□□□□□ -0.74
PHF3-204ENST00000481385 DUSP14O95147 198 aaKnown RBP10.41□□□□□ -0.74
PHF3-204ENST00000481385 RBMY1A1P0DJD3 496 aaKnown RBP10.41□□□□□ -0.74
PHF3-204ENST00000481385 RBMY1CP0DJD4 496 aa10.41□□□□□ -0.74
PHF3-204ENST00000481385 CDKN1BP46527 198 aa10.41□□□□□ -0.74
PHF3-204ENST00000481385 FXYD2P54710 66 aa10.41□□□□□ -0.74
PHF3-204ENST00000481385 RBMY1FQ15415 496 aaKnown RBP10.41□□□□□ -0.74
PHF3-204ENST00000481385 TCTEX1D4Q5JR98 221 aa10.41□□□□□ -0.74
PHF3-204ENST00000481385 AMTNQ6UX39 209 aa10.41□□□□□ -0.74
PHF3-204ENST00000481385 ODF3Q96PU9 254 aa10.41□□□□□ -0.74
PHF3-204ENST00000481385 F8VRH5 84 aa10.4□□□□□ -0.74
PHF3-204ENST00000481385 RAB37Q96AX2 223 aa10.4□□□□□ -0.74
PHF3-204ENST00000481385 H7C1H1 209 aa10.4□□□□□ -0.74
PHF3-204ENST00000481385 TSHBP01222 138 aa10.4□□□□□ -0.74
PHF3-204ENST00000481385 CHTOPQ9Y3Y2 248 aaKnown RBP10.4□□□□□ -0.74
PHF3-204ENST00000481385 KNCNA6PVL3 124 aa10.39□□□□□ -0.75
PHF3-204ENST00000481385 F5H697 171 aa10.39□□□□□ -0.75
PHF3-204ENST00000481385 PLNP26678 52 aa10.39□□□□□ -0.75
PHF3-204ENST00000481385 POLR2KP53803 58 aaKnown RBP10.39□□□□□ -0.75
PHF3-204ENST00000481385 MORN3Q6PF18 240 aaPredicted RBP10.39□□□□□ -0.75
PHF3-204ENST00000481385 A6NDN8 102 aa10.39□□□□□ -0.75
PHF3-204ENST00000481385 H3BRM9 83 aa10.39□□□□□ -0.75
PHF3-204ENST00000481385 GCSHP23434 173 aa10.39□□□□□ -0.75
PHF3-204ENST00000481385 RPL39P62891 51 aaKnown RBP10.39□□□□□ -0.75
PHF3-204ENST00000481385 IGHV1OR15-1A0A075B7D0 117 aa10.38□□□□□ -0.75
PHF3-204ENST00000481385 PRSS29PA6NIE9 313 aa10.38□□□□□ -0.75
PHF3-204ENST00000481385 H3BUT2 72 aa10.38□□□□□ -0.75
PHF3-204ENST00000481385 PRM2P04554 102 aa10.38□□□□□ -0.75
PHF3-204ENST00000481385 HLA-DRB4P13762 266 aa10.38□□□□□ -0.75
PHF3-204ENST00000481385 HIGD1BQ9P298 99 aa10.38□□□□□ -0.75
PHF3-204ENST00000481385 HLA-DRB4X5D2U9 266 aa10.38□□□□□ -0.75
PHF3-204ENST00000481385 FLNAP21333 2647 aaKnown RBP10.38□□□□□ -0.75
PHF3-204ENST00000481385 C9orf118A6NHY6 69 aa10.38□□□□□ -0.75
PHF3-204ENST00000481385 CRYGDP07320 174 aa10.38□□□□□ -0.75
PHF3-204ENST00000481385 CCDC168Q8NDH2 2452 aa10.38□□□□□ -0.75
PHF3-204ENST00000481385 K7ERJ3 54 aa10.37□□□□□ -0.75
PHF3-204ENST00000481385 ZFP2Q6ZN57 461 aa10.37□□□□□ -0.75
PHF3-204ENST00000481385 TP53TG1Q9Y2A0 90 aa10.37□□□□□ -0.75
PHF3-204ENST00000481385 FOXI2Q6ZQN5 318 aa10.37□□□□□ -0.75
PHF3-204ENST00000481385 Q8N2B8 174 aa10.37□□□□□ -0.75
PHF3-204ENST00000481385 SDHAF1A6NFY7 115 aa10.37□□□□□ -0.75
PHF3-204ENST00000481385 PPP1R17O96001 155 aa10.37□□□□□ -0.75
PHF3-204ENST00000481385 OR11H1Q8NG94 326 aa10.37□□□□□ -0.75
PHF3-204ENST00000481385 RBMY1BA6NDE4 496 aaKnown RBP10.36□□□□□ -0.75
PHF3-204ENST00000481385 RBMY1EA6NEQ0 496 aaKnown RBP10.36□□□□□ -0.75
PHF3-204ENST00000481385 RBMY1DP0C7P1 496 aaKnown RBP10.36□□□□□ -0.75
PHF3-204ENST00000481385 EMP1P54849 157 aa10.36□□□□□ -0.75
PHF3-204ENST00000481385 HIST2H2BCQ6DN03 193 aa10.36□□□□□ -0.75
PHF3-204ENST00000481385 ANK3Q12955 4377 aaKnown RBP10.36□□□□□ -0.75
PHF3-204ENST00000481385 DEFB131AP59861 70 aa10.36□□□□□ -0.75
PHF3-204ENST00000481385 IGIPA6NJ69 53 aa10.35□□□□□ -0.75
PHF3-204ENST00000481385 M0QY20 66 aa10.35□□□□□ -0.75
PHF3-204ENST00000481385 FOSL1P15407 271 aa10.35□□□□□ -0.75
PHF3-204ENST00000481385 ZNF56Q15929 161 aa10.35□□□□□ -0.75
PHF3-204ENST00000481385 LRRC75A-AS1Q8N1F1 130 aa10.35□□□□□ -0.75
PHF3-204ENST00000481385 HTN1P15515 57 aa10.35□□□□□ -0.75
PHF3-204ENST00000481385 RPL32P62910 135 aaKnown RBP10.35□□□□□ -0.75
PHF3-204ENST00000481385 TMEM61Q8N0U2 210 aa10.35□□□□□ -0.75
PHF3-204ENST00000481385 ZNF256Q9Y2P7 627 aaPredicted RBP10.35□□□□□ -0.75
PHF3-204ENST00000481385 ZNF876PQ49A33 203 aa10.34□□□□□ -0.75
PHF3-204ENST00000481385 KHDC1LQ5JSQ8 128 aa10.34□□□□□ -0.75
PHF3-204ENST00000481385 CYSLTR1Q9Y271 337 aa10.34□□□□□ -0.75
PHF3-204ENST00000481385 IGLV4-69A0A075B6H9 119 aa10.34□□□□□ -0.75
PHF3-204ENST00000481385 TRBV27A0A0K0K1C4 114 aa10.34□□□□□ -0.75
PHF3-204ENST00000481385 LINC01619G3V211 115 aa10.34□□□□□ -0.75
PHF3-204ENST00000481385 UFSP1Q6NVU6 142 aa10.34□□□□□ -0.75
PHF3-204ENST00000481385 CEND1Q8N111 149 aa10.34□□□□□ -0.75
PHF3-204ENST00000481385 WFDC11Q8NEX6 87 aa10.34□□□□□ -0.75
PHF3-204ENST00000481385 DLX4Q92988 240 aaPredicted RBP10.34□□□□□ -0.75
PHF3-204ENST00000481385 PDZD2O15018 2839 aa10.34□□□□□ -0.75
PHF3-204ENST00000481385 VCYO14598 125 aa10.33□□□□□ -0.76
PHF3-204ENST00000481385 SETD2Q9BYW2 2564 aaPredicted RBP10.33□□□□□ -0.76
PHF3-204ENST00000481385 PHLDA1Q8WV24 401 aaPredicted RBP10.33□□□□□ -0.76
PHF3-204ENST00000481385 TM2D2Q9BX73 214 aa10.33□□□□□ -0.76
PHF3-204ENST00000481385 TRBV6-5A0A0K0K1A5 114 aa10.32□□□□□ -0.76
PHF3-204ENST00000481385 GAGE10A6NGK3 116 aa10.32□□□□□ -0.76
PHF3-204ENST00000481385 RBX1P62877 108 aa10.32□□□□□ -0.76
PHF3-204ENST00000481385 SYT8Q8NBV8 401 aa10.32□□□□□ -0.76
PHF3-204ENST00000481385 KIR2DL4Q99706 377 aa10.32□□□□□ -0.76
PHF3-204ENST00000481385 GAGE12BA1L429 117 aa10.32□□□□□ -0.76
PHF3-204ENST00000481385 C11orf86A6NJI1 115 aa10.32□□□□□ -0.76
PHF3-204ENST00000481385 H3BMM0 161 aa10.32□□□□□ -0.76
PHF3-204ENST00000481385 OPRPNQ99935 248 aaPredicted RBP10.32□□□□□ -0.76
PHF3-204ENST00000481385 PRADC1Q9BSG0 188 aa10.32□□□□□ -0.76
PHF3-204ENST00000481385 NHP2Q9NX24 153 aaKnown RBP10.32□□□□□ -0.76
PHF3-204ENST00000481385 IGHV3-73A0A0B4J1V6 119 aa10.31□□□□□ -0.76
PHF3-204ENST00000481385 OR11H12B2RN74 326 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms