RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 RPL36AP83881 106 aaKnown RBP7.73□□□□□ -1.17
CCM2-213ENST00000480658 FAM74A4Q5TZK3 123 aa7.73□□□□□ -1.17
CCM2-213ENST00000480658 Q6ZNX1 250 aa7.73□□□□□ -1.17
CCM2-213ENST00000480658 RPL36ALQ969Q0 106 aaKnown RBP7.73□□□□□ -1.17
CCM2-213ENST00000480658 BIN3Q9NQY0 253 aa7.73□□□□□ -1.17
CCM2-213ENST00000480658 TRAV1-1A0A0B4J248 108 aa7.72□□□□□ -1.17
CCM2-213ENST00000480658 M0R381 172 aa7.72□□□□□ -1.17
CCM2-213ENST00000480658 IFNA1P01562 189 aa7.72□□□□□ -1.17
CCM2-213ENST00000480658 LINC00694P0DN24 101 aa7.72□□□□□ -1.17
CCM2-213ENST00000480658 TMEM97Q5BJF2 176 aa7.72□□□□□ -1.17
CCM2-213ENST00000480658 UFSP1Q6NVU6 142 aa7.72□□□□□ -1.17
CCM2-213ENST00000480658 BAGE2Q86Y30 109 aa7.72□□□□□ -1.17
CCM2-213ENST00000480658 XKRY2A2RUG3 117 aa7.71□□□□□ -1.18
CCM2-213ENST00000480658 GAGE12JA6NER3 117 aa7.71□□□□□ -1.18
CCM2-213ENST00000480658 PDE6DO43924 150 aa7.71□□□□□ -1.18
CCM2-213ENST00000480658 OR5AL1P0C617 328 aa7.71□□□□□ -1.18
CCM2-213ENST00000480658 SMIM17P0DL12 118 aa7.71□□□□□ -1.18
CCM2-213ENST00000480658 CRIP1P50238 77 aa7.71□□□□□ -1.18
CCM2-213ENST00000480658 RAB4BP61018 213 aa7.71□□□□□ -1.18
CCM2-213ENST00000480658 GAGE1Q13065 139 aa7.71□□□□□ -1.18
CCM2-213ENST00000480658 GAGE4Q13068 117 aa7.71□□□□□ -1.18
CCM2-213ENST00000480658 GAGE5Q13069 117 aa7.71□□□□□ -1.18
CCM2-213ENST00000480658 GAGE13Q4V321 117 aa7.71□□□□□ -1.18
CCM2-213ENST00000480658 TRBV7-3A0A075B6L6 115 aa7.7□□□□□ -1.18
CCM2-213ENST00000480658 A0A087WX48 190 aa7.7□□□□□ -1.18
CCM2-213ENST00000480658 IGLV5-52A0A0A0MRZ9 124 aa7.7□□□□□ -1.18
CCM2-213ENST00000480658 SMLR1H3BR10 107 aa7.7□□□□□ -1.18
CCM2-213ENST00000480658 GCSHP23434 173 aa7.7□□□□□ -1.18
CCM2-213ENST00000480658 RPS20P60866 119 aaKnown RBP7.7□□□□□ -1.18
CCM2-213ENST00000480658 SPANXN1Q5VSR9 72 aa7.7□□□□□ -1.18
CCM2-213ENST00000480658 TMUB2Q71RG4 321 aa7.7□□□□□ -1.18
CCM2-213ENST00000480658 MLST8Q9BVC4 326 aa7.7□□□□□ -1.18
CCM2-213ENST00000480658 KRTAP17-1Q9BYP8 105 aa7.7□□□□□ -1.18
CCM2-213ENST00000480658 SCO2A0A1W2PP80 73 aa7.69□□□□□ -1.18
CCM2-213ENST00000480658 GRIFINA4D1Z8 144 aa7.69□□□□□ -1.18
CCM2-213ENST00000480658 IGHV3-30P01768 117 aa7.69□□□□□ -1.18
CCM2-213ENST00000480658 IGHV3-33P01772 117 aa7.69□□□□□ -1.18
CCM2-213ENST00000480658 C1QBP02746 253 aa7.69□□□□□ -1.18
CCM2-213ENST00000480658 IGHV3-30-3P0DP02 117 aa7.69□□□□□ -1.18
CCM2-213ENST00000480658 IGHV3-30-5P0DP03 117 aa7.69□□□□□ -1.18
CCM2-213ENST00000480658 Q0VG73 95 aa7.69□□□□□ -1.18
CCM2-213ENST00000480658 TCTE3Q8IZS6 198 aa7.69□□□□□ -1.18
CCM2-213ENST00000480658 Q8N814 137 aa7.69□□□□□ -1.18
CCM2-213ENST00000480658 OR10G8Q8NGN5 311 aa7.69□□□□□ -1.18
CCM2-213ENST00000480658 C11orf52Q96A22 123 aa7.69□□□□□ -1.18
CCM2-213ENST00000480658 DAZAP1Q96EP5 407 aaKnown RBP7.69□□□□□ -1.18
CCM2-213ENST00000480658 AP1S3Q96PC3 154 aa7.69□□□□□ -1.18
CCM2-213ENST00000480658 TMEM70Q9BUB7 260 aa7.69□□□□□ -1.18
CCM2-213ENST00000480658 Q9HAA7 133 aa7.69□□□□□ -1.18
CCM2-213ENST00000480658 PCLOQ9Y6V0 5065 aa7.68□□□□□ -1.18
CCM2-213ENST00000480658 DYNC1H1Q14204 4646 aaKnown RBP7.68□□□□□ -1.18
CCM2-213ENST00000480658 hCG_2014768A0A024R1R8 64 aa7.68□□□□□ -1.18
CCM2-213ENST00000480658 A0A087WWL8 130 aa7.68□□□□□ -1.18
CCM2-213ENST00000480658 TMSB15BA0A087X1C1 80 aa7.68□□□□□ -1.18
CCM2-213ENST00000480658 A0A1B0GVG6 124 aa7.68□□□□□ -1.18
CCM2-213ENST00000480658 EPM2AB3EWF7 344 aa7.68□□□□□ -1.18
CCM2-213ENST00000480658 H7C1H1 209 aa7.68□□□□□ -1.18
CCM2-213ENST00000480658 SNAI2O43623 268 aa7.68□□□□□ -1.18
CCM2-213ENST00000480658 RPL35P42766 123 aaKnown RBP7.68□□□□□ -1.18
CCM2-213ENST00000480658 ZNF56Q15929 161 aa7.68□□□□□ -1.18
CCM2-213ENST00000480658 FRZBQ92765 325 aa7.68□□□□□ -1.18
CCM2-213ENST00000480658 SSBP4Q9BWG4 385 aaPredicted RBP7.68□□□□□ -1.18
CCM2-213ENST00000480658 GNG13Q9P2W3 67 aa7.68□□□□□ -1.18
CCM2-213ENST00000480658 TNFRSF18Q9Y5U5 241 aa7.68□□□□□ -1.18
CCM2-213ENST00000480658 LRCOL1A6NCL2 159 aa7.67□□□□□ -1.18
CCM2-213ENST00000480658 MEF2BQ02080 365 aaPredicted RBP7.67□□□□□ -1.18
CCM2-213ENST00000480658 PRR27Q6MZM9 219 aa7.67□□□□□ -1.18
CCM2-213ENST00000480658 DAZ4Q86SG3 579 aaKnown RBP7.67□□□□□ -1.18
CCM2-213ENST00000480658 SLC51BQ86UW2 128 aa7.67□□□□□ -1.18
CCM2-213ENST00000480658 C14orf178Q8N769 122 aaPredicted RBP7.67□□□□□ -1.18
CCM2-213ENST00000480658 SAMD10Q9BYL1 202 aa7.67□□□□□ -1.18
CCM2-213ENST00000480658 DAZ3Q9NR90 486 aaKnown RBP7.67□□□□□ -1.18
CCM2-213ENST00000480658 A0A1B0GV50 99 aa7.66□□□□□ -1.18
CCM2-213ENST00000480658 RBFOX3A6NFN3 312 aa7.66□□□□□ -1.18
CCM2-213ENST00000480658 F2Z2F3 143 aa7.66□□□□□ -1.18
CCM2-213ENST00000480658 CRPP02741 224 aa7.66□□□□□ -1.18
CCM2-213ENST00000480658 GNG4P50150 75 aa7.66□□□□□ -1.18
CCM2-213ENST00000480658 SULT1A2P50226 295 aa7.66□□□□□ -1.18
CCM2-213ENST00000480658 UBE2D3P61077 147 aa7.66□□□□□ -1.18
CCM2-213ENST00000480658 UBE2D2P62837 147 aa7.66□□□□□ -1.18
CCM2-213ENST00000480658 CACNG7P62955 275 aa7.66□□□□□ -1.18
CCM2-213ENST00000480658 C14orf177Q52M58 125 aa7.66□□□□□ -1.18
CCM2-213ENST00000480658 Q6ZSN1 163 aa7.66□□□□□ -1.18
CCM2-213ENST00000480658 NIT1Q86X76 327 aa7.66□□□□□ -1.18
CCM2-213ENST00000480658 CCL20P78556 96 aa7.65□□□□□ -1.18
CCM2-213ENST00000480658 C4orf48Q5BLP8 95 aa7.65□□□□□ -1.18
CCM2-213ENST00000480658 CENPWQ5EE01 88 aa7.65□□□□□ -1.18
CCM2-213ENST00000480658 Q8N976 141 aa7.65□□□□□ -1.18
CCM2-213ENST00000480658 OR10AG1Q8NH19 301 aa7.65□□□□□ -1.18
CCM2-213ENST00000480658 JPT2Q9H910 190 aa7.65□□□□□ -1.18
CCM2-213ENST00000480658 TRBV6-8A0A0A6YYG3 113 aa7.64□□□□□ -1.19
CCM2-213ENST00000480658 F5H697 171 aa7.64□□□□□ -1.19
CCM2-213ENST00000480658 FAM229AH3BQW9 127 aa7.64□□□□□ -1.19
CCM2-213ENST00000480658 P01737 135 aa7.64□□□□□ -1.19
CCM2-213ENST00000480658 TRGC1P0CF51 173 aa7.64□□□□□ -1.19
CCM2-213ENST00000480658 BCL2P10415 239 aa7.64□□□□□ -1.19
CCM2-213ENST00000480658 DNAJC30Q96LL9 226 aa7.64□□□□□ -1.19
CCM2-213ENST00000480658 VAX2Q9UIW0 290 aa7.64□□□□□ -1.19
CCM2-213ENST00000480658 FER1L6-AS1Q8NA97 138 aa7.63□□□□□ -1.19
CCM2-213ENST00000480658 C1orf43Q9BWL3 253 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms