RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 IFNA4P05014 189 aa0.38□□□□□ -2.35
CALD1-219ENST00000480638 FOXA3P55318 350 aaPredicted RBP0.38□□□□□ -2.35
CALD1-219ENST00000480638 DR1Q01658 176 aa0.38□□□□□ -2.35
CALD1-219ENST00000480638 Q5XG85 94 aa0.38□□□□□ -2.35
CALD1-219ENST00000480638 C2orf82Q6UX34 121 aa0.38□□□□□ -2.35
CALD1-219ENST00000480638 ZCCHC23Q6ZST2 131 aa0.38□□□□□ -2.35
CALD1-219ENST00000480638 LRRC18Q8N456 261 aa0.38□□□□□ -2.35
CALD1-219ENST00000480638 ISOC1Q96CN7 298 aa0.38□□□□□ -2.35
CALD1-219ENST00000480638 MUCL1Q96DR8 90 aa0.38□□□□□ -2.35
CALD1-219ENST00000480638 CBLN4Q9NTU7 201 aa0.38□□□□□ -2.35
CALD1-219ENST00000480638 ORMDL1Q9P0S3 153 aa0.38□□□□□ -2.35
CALD1-219ENST00000480638 LAMTOR3Q9UHA4 124 aa0.38□□□□□ -2.35
CALD1-219ENST00000480638 SYNE1Q8NF91 8797 aaKnown RBP0.38□□□□□ -2.35
CALD1-219ENST00000480638 A0A0G2JMZ2 1700 aa0.38□□□□□ -2.35
CALD1-219ENST00000480638 MYO3AQ8NEV4 1616 aa0.38□□□□□ -2.35
CALD1-219ENST00000480638 PHRF1Q9P1Y6 1649 aaKnown RBP0.38□□□□□ -2.35
CALD1-219ENST00000480638 PRDM15P57071 1507 aaPredicted RBP0.38□□□□□ -2.35
CALD1-219ENST00000480638 MAGI3Q5TCQ9 1506 aa0.38□□□□□ -2.35
CALD1-219ENST00000480638 SCN11AQ9UI33 1791 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 IQGAP1P46940 1657 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 TIAM1Q13009 1591 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 CCDC88BA6NC98 1476 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 PZPP20742 1482 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 NCAPD3P42695 1498 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 TSC2P49815 1807 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 TAF1LQ8IZX4 1826 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 TRBV27A0A0K0K1C4 114 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 LOC107984640A0A0U1RRK4 108 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 A0A1W2PPM0 123 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 F8W1H4 67 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 M0QZK8 103 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 FABP4P15090 132 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 S100GP29377 79 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 SDC2P34741 201 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 MIR22HGQ0VDD5 57 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 FAM74A1Q5RGS3 127 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 SAMD13Q5VXD3 122 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 TOMM20LQ6UXN7 152 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 LINC00322Q6ZN03 302 aaPredicted RBP0.37□□□□□ -2.35
CALD1-219ENST00000480638 FOXI2Q6ZQN5 318 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 LINC00305Q7Z4B0 112 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 AKAP14Q86UN6 197 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 OR5AS1Q8N127 324 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.37□□□□□ -2.35
CALD1-219ENST00000480638 OR9Q1Q8NGQ5 310 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 OR5H6Q8NGV6 325 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 C4orf3Q8WVX3 66 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 CLEC2BQ92478 149 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 PRELID3AQ96N28 172 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 NABP2Q9BQ15 211 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 LIMD2Q9BT23 127 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 FKBP11Q9NYL4 201 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 GINS2Q9Y248 185 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 LAMTOR2Q9Y2Q5 125 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 LAMC1P11047 1609 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 MCM3APO60318 1980 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 DUOX2Q9NRD8 1548 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 AKAP6Q13023 2319 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 SOGA1O94964 1423 aa0.37□□□□□ -2.35
CALD1-219ENST00000480638 URB1O60287 2271 aaKnown RBP0.36□□□□□ -2.35
CALD1-219ENST00000480638 VPS13BQ7Z7G8 4022 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 NUP98P52948 1817 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 FMN2Q9NZ56 1722 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 LPAP08519 4548 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 MGAMO43451 1857 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 TRAV13-1A0A0B4J241 112 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 TRBV7-6A0A0J9YX20 115 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 LOC105371267A0A1B0GV96 52 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 A0A1B0GW64 132 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 TSTD3H0UI37 97 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 H3BMG7 143 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 H3BRM9 83 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 LYRM1O43325 122 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 COX7CP15954 63 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 CRYGSP22914 178 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 PSG9Q00887 426 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 DIAPH2-AS1Q14236 149 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 OR8B8Q15620 311 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 VMA21Q3ZAQ7 101 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 CROCCP2Q86T23 111 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 GKN2Q86XP6 184 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 TMEM229BQ8NBD8 167 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 MORN4Q8NDC4 146 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 NAT14Q8WUY8 206 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 OR4C12Q96R67 309 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 TCEAL2Q9H3H9 227 aaPredicted RBP0.36□□□□□ -2.35
CALD1-219ENST00000480638 TMEM138Q9NPI0 162 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 EFCAB5A4FU69 1503 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 ABCC3O15438 1527 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 DNAH8Q96JB1 4490 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 KDM6AO15550 1401 aaPredicted RBP0.36□□□□□ -2.35
CALD1-219ENST00000480638 KIAA1107Q9UPP5 1409 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 MYH7BA7E2Y1 1941 aa0.36□□□□□ -2.35
CALD1-219ENST00000480638 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.35□□□□□ -2.35
CALD1-219ENST00000480638 A2ML1A8K2U0 1454 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 CCDC18Q5T9S5 1454 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 MBD5Q9P267 1494 aa0.35□□□□□ -2.35
CALD1-219ENST00000480638 SNRNP200O75643 2136 aaKnown RBP0.35□□□□□ -2.35
CALD1-219ENST00000480638 MYO5AQ9Y4I1 1855 aaKnown RBP0.35□□□□□ -2.35
CALD1-219ENST00000480638 SCN3AQ9NY46 2000 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms