RNA–Protein interactions for RNA: ENST00000480548.5

SGIP1-209, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 5

Gene SGIP1, Length 801 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-209ENST00000480548 HIGD1CA8MV81 97 aa2.63□□□□□ -1.99
SGIP1-209ENST00000480548 UBE2L3P68036 154 aaKnown RBP2.63□□□□□ -1.99
SGIP1-209ENST00000480548 DCDP81605 110 aaKnown RBP2.63□□□□□ -1.99
SGIP1-209ENST00000480548 SPATA45Q537H7 98 aa2.63□□□□□ -1.99
SGIP1-209ENST00000480548 SBSPONQ8IVN8 264 aa2.63□□□□□ -1.99
SGIP1-209ENST00000480548 C10orf82Q8WW14 230 aa2.63□□□□□ -1.99
SGIP1-209ENST00000480548 IFT140Q96RY7 1462 aa2.63□□□□□ -1.99
SGIP1-209ENST00000480548 SIP14410 1827 aa2.63□□□□□ -1.99
SGIP1-209ENST00000480548 GBF1Q92538 1859 aa2.62□□□□□ -1.99
SGIP1-209ENST00000480548 RBBP6Q7Z6E9 1792 aaKnown RBP2.62□□□□□ -1.99
SGIP1-209ENST00000480548 SSSCA1O60232 199 aa2.62□□□□□ -1.99
SGIP1-209ENST00000480548 ATP5EP56381 51 aaPredicted RBP2.62□□□□□ -1.99
SGIP1-209ENST00000480548 KRTAP10-10P60014 251 aa2.62□□□□□ -1.99
SGIP1-209ENST00000480548 KRTAP4-3Q9BYR4 195 aa2.62□□□□□ -1.99
SGIP1-209ENST00000480548 ADGRB2O60241 1585 aa2.61□□□□□ -1.99
SGIP1-209ENST00000480548 CPSF1Q10570 1443 aaKnown RBP2.61□□□□□ -1.99
SGIP1-209ENST00000480548 PVALEFA0A1B0GWK0 134 aa2.61□□□□□ -1.99
SGIP1-209ENST00000480548 IL9P15248 144 aa2.61□□□□□ -1.99
SGIP1-209ENST00000480548 GDF5OSQ5U4N7 250 aa2.61□□□□□ -1.99
SGIP1-209ENST00000480548 C4orf33Q8N1A6 199 aa2.61□□□□□ -1.99
SGIP1-209ENST00000480548 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
SGIP1-209ENST00000480548 ARFGEF3Q5TH69 2177 aa2.6□□□□□ -1.99
SGIP1-209ENST00000480548 TNRC6AQ8NDV7 1962 aaKnown RBP2.6□□□□□ -1.99
SGIP1-209ENST00000480548 TRBV6-7A0A0A0MS04 114 aa2.6□□□□□ -1.99
SGIP1-209ENST00000480548 TRAV13-2A0A0B4J235 113 aa2.6□□□□□ -1.99
SGIP1-209ENST00000480548 RBAKDNA6NC62 111 aa2.6□□□□□ -1.99
SGIP1-209ENST00000480548 HCG22E2RYF7 251 aa2.6□□□□□ -1.99
SGIP1-209ENST00000480548 SNCAP37840 140 aa2.6□□□□□ -1.99
SGIP1-209ENST00000480548 PCOTHQ58A44 107 aa2.6□□□□□ -1.99
SGIP1-209ENST00000480548 COMMD6Q7Z4G1 85 aa2.6□□□□□ -1.99
SGIP1-209ENST00000480548 ZNF563Q8TA94 476 aa2.6□□□□□ -1.99
SGIP1-209ENST00000480548 PLXNA2O75051 1894 aa2.6□□□□□ -1.99
SGIP1-209ENST00000480548 SCRIBQ14160 1630 aa2.6□□□□□ -1.99
SGIP1-209ENST00000480548 RPL37AP61513 92 aaKnown RBP2.59□□□□□ -1.99
SGIP1-209ENST00000480548 CCL8P80075 99 aa2.59□□□□□ -1.99
SGIP1-209ENST00000480548 UNQ6190/PRO20217Q6UXQ8 127 aa2.59□□□□□ -1.99
SGIP1-209ENST00000480548 CYP2G1PQ6ZSU1 146 aa2.59□□□□□ -1.99
SGIP1-209ENST00000480548 DPY30Q9C005 99 aa2.59□□□□□ -1.99
SGIP1-209ENST00000480548 MYO18AQ92614 2054 aaKnown RBP2.59□□□□□ -2
SGIP1-209ENST00000480548 C10orf71Q711Q0 1435 aa2.59□□□□□ -2
SGIP1-209ENST00000480548 PTPRDP23468 1912 aa2.58□□□□□ -2
SGIP1-209ENST00000480548 LOC101927531A0A1B0GV80 90 aa2.58□□□□□ -2
SGIP1-209ENST00000480548 FXYD4P59646 89 aa2.58□□□□□ -2
SGIP1-209ENST00000480548 AP4S1Q9Y587 144 aa2.58□□□□□ -2
SGIP1-209ENST00000480548 INTS1Q8N201 2190 aaKnown RBP2.58□□□□□ -2
SGIP1-209ENST00000480548 VWDEQ8N2E2 1590 aa2.57□□□□□ -2
SGIP1-209ENST00000480548 IGKV3D-7A0A0C4DH55 119 aa2.57□□□□□ -2
SGIP1-209ENST00000480548 IGKV3OR2-268A0A0C4DH90 116 aa2.57□□□□□ -2
SGIP1-209ENST00000480548 H3BQ15 152 aa2.57□□□□□ -2
SGIP1-209ENST00000480548 UBA52P62987 128 aaKnown RBP2.57□□□□□ -2
SGIP1-209ENST00000480548 ZCCHC13Q8WW36 166 aaKnown RBP2.57□□□□□ -2
SGIP1-209ENST00000480548 AMELYQ99218 206 aa2.57□□□□□ -2
SGIP1-209ENST00000480548 CYSTM1Q9H1C7 97 aa2.57□□□□□ -2
SGIP1-209ENST00000480548 Q9H521 79 aa2.57□□□□□ -2
SGIP1-209ENST00000480548 TTC37Q6PGP7 1564 aa2.57□□□□□ -2
SGIP1-209ENST00000480548 LINC00032P0C843 101 aa2.56□□□□□ -2
SGIP1-209ENST00000480548 ZNF818PQ6ZRF7 136 aa2.56□□□□□ -2
SGIP1-209ENST00000480548 OBSCN-AS1Q96MR7 158 aa2.56□□□□□ -2
SGIP1-209ENST00000480548 CDK12Q9NYV4 1490 aaPredicted RBP2.56□□□□□ -2
SGIP1-209ENST00000480548 ROBO1Q9Y6N7 1651 aa2.56□□□□□ -2
SGIP1-209ENST00000480548 MUC22E2RYF6 1773 aaPredicted RBP2.56□□□□□ -2
SGIP1-209ENST00000480548 EXPH5Q8NEV8 1989 aa2.56□□□□□ -2
SGIP1-209ENST00000480548 PCNX2A6NKB5 2137 aa2.56□□□□□ -2
SGIP1-209ENST00000480548 TEX49A0A1B0GTD5 131 aa2.55□□□□□ -2
SGIP1-209ENST00000480548 SIX6O95475 246 aa2.55□□□□□ -2
SGIP1-209ENST00000480548 LAMB1P07942 1786 aa2.55□□□□□ -2
SGIP1-209ENST00000480548 CTTNBP2Q8WZ74 1663 aa2.55□□□□□ -2
SGIP1-209ENST00000480548 SPAG17Q6Q759 2223 aa2.54□□□□□ -2
SGIP1-209ENST00000480548 ARHGAP5Q13017 1502 aa2.54□□□□□ -2
SGIP1-209ENST00000480548 MT-ATP8P03928 68 aa2.54□□□□□ -2
SGIP1-209ENST00000480548 UBE2D1P51668 147 aa2.54□□□□□ -2
SGIP1-209ENST00000480548 KRTAP12-1P59990 96 aa2.54□□□□□ -2
SGIP1-209ENST00000480548 DEFB132Q7Z7B7 95 aa2.54□□□□□ -2
SGIP1-209ENST00000480548 MYOZ3Q8TDC0 251 aa2.54□□□□□ -2
SGIP1-209ENST00000480548 LINC00474Q9P2X8 69 aa2.54□□□□□ -2
SGIP1-209ENST00000480548 SPHKAPQ2M3C7 1700 aa2.54□□□□□ -2
SGIP1-209ENST00000480548 NSD3Q9BZ95 1437 aa2.53□□□□□ -2
SGIP1-209ENST00000480548 IGKV2-29A2NJV5 120 aaPredicted RBP2.53□□□□□ -2
SGIP1-209ENST00000480548 CYP4F30PQ9H0H9 118 aa2.53□□□□□ -2
SGIP1-209ENST00000480548 V9GYS6 101 aa2.53□□□□□ -2
SGIP1-209ENST00000480548 TNRC6BQ9UPQ9 1833 aaKnown RBP2.53□□□□□ -2
SGIP1-209ENST00000480548 SDK1Q7Z5N4 2213 aa2.53□□□□□ -2
SGIP1-209ENST00000480548 TEX14Q8IWB6 1497 aa2.52□□□□□ -2.01
SGIP1-209ENST00000480548 SCAPERQ9BY12 1400 aa2.52□□□□□ -2.01
SGIP1-209ENST00000480548 KIAA0100Q14667 2235 aaKnown RBP2.52□□□□□ -2.01
SGIP1-209ENST00000480548 GNG11P61952 73 aa2.52□□□□□ -2.01
SGIP1-209ENST00000480548 XAF1Q6GPH4 301 aa2.52□□□□□ -2.01
SGIP1-209ENST00000480548 PP632Q6XCG6 107 aa2.52□□□□□ -2.01
SGIP1-209ENST00000480548 C20orf197Q8N268 126 aa2.52□□□□□ -2.01
SGIP1-209ENST00000480548 VAMP8Q9BV40 100 aa2.52□□□□□ -2.01
SGIP1-209ENST00000480548 LINC00312Q9Y6C7 94 aa2.52□□□□□ -2.01
SGIP1-209ENST00000480548 CASKIN1Q8WXD9 1431 aa2.51□□□□□ -2.01
SGIP1-209ENST00000480548 NBDYA0A0U1RRE5 68 aa2.51□□□□□ -2.01
SGIP1-209ENST00000480548 GNGT2O14610 69 aa2.51□□□□□ -2.01
SGIP1-209ENST00000480548 FXYD3Q14802 87 aa2.51□□□□□ -2.01
SGIP1-209ENST00000480548 C10orf128Q5T292 105 aa2.51□□□□□ -2.01
SGIP1-209ENST00000480548 ZGRF1Q86YA3 2104 aa2.51□□□□□ -2.01
SGIP1-209ENST00000480548 RAPGEF2Q9Y4G8 1499 aa2.51□□□□□ -2.01
SGIP1-209ENST00000480548 ARAP2Q8WZ64 1704 aa2.51□□□□□ -2.01
SGIP1-209ENST00000480548 TET1Q8NFU7 2136 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms