RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 RPL36AP83881 106 aaKnown RBP10.89□□□□□ -0.67
HMGN1-212ENST00000479586 PQLC2Q6ZP29 291 aa10.89□□□□□ -0.67
HMGN1-212ENST00000479586 PRNTQ86SH4 94 aa10.89□□□□□ -0.67
HMGN1-212ENST00000479586 RPL36ALQ969Q0 106 aaKnown RBP10.89□□□□□ -0.67
HMGN1-212ENST00000479586 PLAC8Q9NZF1 115 aa10.89□□□□□ -0.67
HMGN1-212ENST00000479586 IL36BQ9NZH7 164 aa10.89□□□□□ -0.67
HMGN1-212ENST00000479586 TRBV7-3A0A075B6L6 115 aa10.88□□□□□ -0.67
HMGN1-212ENST00000479586 TRBV10-1A0A0K0K1A3 114 aa10.88□□□□□ -0.67
HMGN1-212ENST00000479586 HMGB3O15347 200 aaKnown RBP10.88□□□□□ -0.67
HMGN1-212ENST00000479586 TCRBP04435 133 aa10.88□□□□□ -0.67
HMGN1-212ENST00000479586 IL7P13232 177 aa10.88□□□□□ -0.67
HMGN1-212ENST00000479586 CLRN3Q8NCR9 226 aa10.88□□□□□ -0.67
HMGN1-212ENST00000479586 NUDT15Q9NV35 164 aa10.88□□□□□ -0.67
HMGN1-212ENST00000479586 PRR34Q9NV39 138 aa10.88□□□□□ -0.67
HMGN1-212ENST00000479586 hDV102S1A0JD36 115 aa10.87□□□□□ -0.67
HMGN1-212ENST00000479586 PLA2G10O15496 165 aa10.87□□□□□ -0.67
HMGN1-212ENST00000479586 SLPIP03973 132 aa10.87□□□□□ -0.67
HMGN1-212ENST00000479586 FLI1Q01543 452 aaPredicted RBP10.87□□□□□ -0.67
HMGN1-212ENST00000479586 C5orf17Q8NAS9 161 aa10.87□□□□□ -0.67
HMGN1-212ENST00000479586 CHCHD5Q9BSY4 110 aa10.87□□□□□ -0.67
HMGN1-212ENST00000479586 H0YIZ8 118 aa10.86□□□□□ -0.67
HMGN1-212ENST00000479586 PTTG1O95997 202 aa10.86□□□□□ -0.67
HMGN1-212ENST00000479586 LRRC37A5PQ49AS3 106 aa10.86□□□□□ -0.67
HMGN1-212ENST00000479586 OR11H4Q8NGC9 324 aa10.86□□□□□ -0.67
HMGN1-212ENST00000479586 SFRP2Q96HF1 295 aa10.86□□□□□ -0.67
HMGN1-212ENST00000479586 K7EQM0 130 aa10.85□□□□□ -0.67
HMGN1-212ENST00000479586 ARMS2P0C7Q2 107 aa10.85□□□□□ -0.67
HMGN1-212ENST00000479586 LINC00269Q8N2A0 174 aa10.85□□□□□ -0.67
HMGN1-212ENST00000479586 GTSF1Q8WW33 167 aa10.85□□□□□ -0.67
HMGN1-212ENST00000479586 KRTAP9-6A0A140TA67 174 aa10.84□□□□□ -0.67
HMGN1-212ENST00000479586 A0A1W2PPV4 95 aa10.84□□□□□ -0.67
HMGN1-212ENST00000479586 B4DEV8 164 aa10.84□□□□□ -0.67
HMGN1-212ENST00000479586 LYRM1O43325 122 aa10.84□□□□□ -0.67
HMGN1-212ENST00000479586 SIX6O95475 246 aa10.84□□□□□ -0.67
HMGN1-212ENST00000479586 ARL14EPLP0DKL9 152 aa10.84□□□□□ -0.67
HMGN1-212ENST00000479586 RAB2AP61019 212 aa10.84□□□□□ -0.67
HMGN1-212ENST00000479586 REG3GQ6UW15 175 aa10.84□□□□□ -0.67
HMGN1-212ENST00000479586 OR10G8Q8NGN5 311 aa10.84□□□□□ -0.67
HMGN1-212ENST00000479586 IGLV10-54A0A075B6I4 117 aa10.83□□□□□ -0.68
HMGN1-212ENST00000479586 RBX1P62877 108 aa10.83□□□□□ -0.68
HMGN1-212ENST00000479586 SAPCD1Q5SSQ6 148 aa10.83□□□□□ -0.68
HMGN1-212ENST00000479586 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.82□□□□□ -0.68
HMGN1-212ENST00000479586 MUC21A0A0G2JKD1 596 aa10.82□□□□□ -0.68
HMGN1-212ENST00000479586 GRIFINA4D1Z8 144 aa10.82□□□□□ -0.68
HMGN1-212ENST00000479586 FABP5P3A8MUU1 101 aa10.82□□□□□ -0.68
HMGN1-212ENST00000479586 M0R381 172 aa10.82□□□□□ -0.68
HMGN1-212ENST00000479586 PKIAP61925 76 aa10.82□□□□□ -0.68
HMGN1-212ENST00000479586 SCGB1C1Q8TD33 95 aa10.82□□□□□ -0.68
HMGN1-212ENST00000479586 SMIM3Q9BZL3 60 aa10.82□□□□□ -0.68
HMGN1-212ENST00000479586 AP5S1Q9NUS5 200 aa10.82□□□□□ -0.68
HMGN1-212ENST00000479586 EPDR1Q9UM22 224 aa10.82□□□□□ -0.68
HMGN1-212ENST00000479586 CCDC160A6NGH7 325 aa10.81□□□□□ -0.68
HMGN1-212ENST00000479586 M0R036 132 aa10.81□□□□□ -0.68
HMGN1-212ENST00000479586 H2AFB2P0C5Z0 115 aa10.81□□□□□ -0.68
HMGN1-212ENST00000479586 DNLZQ5SXM8 178 aa10.81□□□□□ -0.68
HMGN1-212ENST00000479586 SPINK6Q6UWN8 80 aa10.81□□□□□ -0.68
HMGN1-212ENST00000479586 NTM-AS1Q6ZSK4 140 aa10.81□□□□□ -0.68
HMGN1-212ENST00000479586 NEXN-AS1Q8NBZ9 246 aa10.81□□□□□ -0.68
HMGN1-212ENST00000479586 TRAV34A0A0B4J273 112 aa10.8□□□□□ -0.68
HMGN1-212ENST00000479586 KRBOX1C9JBD0 128 aa10.8□□□□□ -0.68
HMGN1-212ENST00000479586 SUMO1P63165 101 aaKnown RBP10.8□□□□□ -0.68
HMGN1-212ENST00000479586 GAGE6Q13070 117 aa10.8□□□□□ -0.68
HMGN1-212ENST00000479586 LYPD6BQ8NI32 183 aa10.8□□□□□ -0.68
HMGN1-212ENST00000479586 HSPB11Q9Y547 144 aa10.8□□□□□ -0.68
HMGN1-212ENST00000479586 PHLDA3Q9Y5J5 127 aa10.8□□□□□ -0.68
HMGN1-212ENST00000479586 ARL2-SNX15V9GYD0 113 aa10.8□□□□□ -0.68
HMGN1-212ENST00000479586 COX6A2Q02221 97 aa10.79□□□□□ -0.68
HMGN1-212ENST00000479586 MAJINQ3KP22 176 aa10.79□□□□□ -0.68
HMGN1-212ENST00000479586 RBM38Q9H0Z9 239 aaKnown RBP10.79□□□□□ -0.68
HMGN1-212ENST00000479586 IGKV2-24A0A0C4DH68 120 aa10.78□□□□□ -0.68
HMGN1-212ENST00000479586 TPT1P13693 172 aaKnown RBP10.78□□□□□ -0.68
HMGN1-212ENST00000479586 REG3AQ06141 175 aa10.78□□□□□ -0.68
HMGN1-212ENST00000479586 SUN5Q8TC36 379 aa10.78□□□□□ -0.68
HMGN1-212ENST00000479586 STAG3L2P0CL84 134 aa10.77□□□□□ -0.69
HMGN1-212ENST00000479586 STAG3L3P0CL85 134 aa10.77□□□□□ -0.69
HMGN1-212ENST00000479586 GCHFRP30047 84 aa10.77□□□□□ -0.69
HMGN1-212ENST00000479586 CRIP1P50238 77 aa10.77□□□□□ -0.69
HMGN1-212ENST00000479586 PRR27Q6MZM9 219 aa10.77□□□□□ -0.69
HMGN1-212ENST00000479586 STPG4Q8N801 248 aa10.77□□□□□ -0.69
HMGN1-212ENST00000479586 WFDC1Q9HC57 220 aa10.77□□□□□ -0.69
HMGN1-212ENST00000479586 TMSB15BA0A087X1C1 80 aa10.76□□□□□ -0.69
HMGN1-212ENST00000479586 CDC34P49427 236 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-212ENST00000479586 RAB5CP51148 216 aa10.76□□□□□ -0.69
HMGN1-212ENST00000479586 RAB4BP61018 213 aa10.76□□□□□ -0.69
HMGN1-212ENST00000479586 SRSF9Q13242 221 aaKnown RBP eCLIP10.76□□□□□ -0.69
HMGN1-212ENST00000479586 ZNF56Q15929 161 aa10.76□□□□□ -0.69
HMGN1-212ENST00000479586 ZFP82Q8N141 532 aa10.76□□□□□ -0.69
HMGN1-212ENST00000479586 PRSS3P2Q8NHM4 247 aa10.76□□□□□ -0.69
HMGN1-212ENST00000479586 SH2D1AO60880 128 aa10.75□□□□□ -0.69
HMGN1-212ENST00000479586 Q86TA4 180 aa10.75□□□□□ -0.69
HMGN1-212ENST00000479586 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.74□□□□□ -0.69
HMGN1-212ENST00000479586 C20orf203Q8NBC4 194 aa10.74□□□□□ -0.69
HMGN1-212ENST00000479586 DERL1Q9BUN8 251 aa10.74□□□□□ -0.69
HMGN1-212ENST00000479586 NDUFS6O75380 124 aaKnown RBP10.73□□□□□ -0.69
HMGN1-212ENST00000479586 RPL12P30050 165 aaKnown RBP10.73□□□□□ -0.69
HMGN1-212ENST00000479586 C15orf56Q8N910 161 aa10.73□□□□□ -0.69
HMGN1-212ENST00000479586 PPP1R1CQ8WVI7 109 aa10.73□□□□□ -0.69
HMGN1-212ENST00000479586 RAB24Q969Q5 203 aa10.73□□□□□ -0.69
HMGN1-212ENST00000479586 TRBV25-1A0A075B6N4 114 aa10.72□□□□□ -0.69
HMGN1-212ENST00000479586 TRAV8-4A0A0B4J246 113 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms