RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 IGHV3-53P01767 116 aa9.26□□□□□ -0.93
CHD3-210ENST00000479080 DEFB130BP0DP73 79 aa9.26□□□□□ -0.93
CHD3-210ENST00000479080 DEFB130AP0DP74 79 aa9.26□□□□□ -0.93
CHD3-210ENST00000479080 S100PP25815 95 aa9.26□□□□□ -0.93
CHD3-210ENST00000479080 CAMPP49913 170 aa9.26□□□□□ -0.93
CHD3-210ENST00000479080 HBBP68871 147 aa9.26□□□□□ -0.93
CHD3-210ENST00000479080 RIGQ13278 110 aa9.26□□□□□ -0.93
CHD3-210ENST00000479080 Q6ZSN1 163 aa9.26□□□□□ -0.93
CHD3-210ENST00000479080 C14orf178Q8N769 122 aaPredicted RBP9.26□□□□□ -0.93
CHD3-210ENST00000479080 NACAE9PAV3 2078 aa9.25□□□□□ -0.93
CHD3-210ENST00000479080 TRAV4A0A0B4J268 109 aa9.25□□□□□ -0.93
CHD3-210ENST00000479080 GAS8-AS1O95177 125 aa9.25□□□□□ -0.93
CHD3-210ENST00000479080 SPART-AS1P0CW21 52 aa9.25□□□□□ -0.93
CHD3-210ENST00000479080 NANOS2P60321 138 aaKnown RBP9.25□□□□□ -0.93
CHD3-210ENST00000479080 SYT8Q8NBV8 401 aa9.25□□□□□ -0.93
CHD3-210ENST00000479080 AP1S3Q96PC3 154 aa9.25□□□□□ -0.93
CHD3-210ENST00000479080 NDUFAF3Q9BU61 184 aa9.25□□□□□ -0.93
CHD3-210ENST00000479080 STAB2Q8WWQ8 2551 aa9.24□□□□□ -0.93
CHD3-210ENST00000479080 PLECQ15149 4684 aaKnown RBP9.24□□□□□ -0.93
CHD3-210ENST00000479080 IGHV3-73A0A0B4J1V6 119 aa9.24□□□□□ -0.93
CHD3-210ENST00000479080 HOXA5P20719 270 aa9.24□□□□□ -0.93
CHD3-210ENST00000479080 Q6ZTC4 211 aa9.24□□□□□ -0.93
CHD3-210ENST00000479080 AMN1Q8IY45 258 aa9.24□□□□□ -0.93
CHD3-210ENST00000479080 FAM210BQ96KR6 192 aa9.24□□□□□ -0.93
CHD3-210ENST00000479080 TMEM191AQ9H0A3 160 aa9.24□□□□□ -0.93
CHD3-210ENST00000479080 U3KQK5 164 aa9.24□□□□□ -0.93
CHD3-210ENST00000479080 A8MWV9 139 aa9.23□□□□□ -0.93
CHD3-210ENST00000479080 DAD1P61803 113 aa9.23□□□□□ -0.93
CHD3-210ENST00000479080 FHL2Q14192 279 aa9.23□□□□□ -0.93
CHD3-210ENST00000479080 BORCS7Q96B45 105 aa9.23□□□□□ -0.93
CHD3-210ENST00000479080 DPH3P1Q9H4G8 78 aa9.23□□□□□ -0.93
CHD3-210ENST00000479080 Q9UF83 564 aa9.23□□□□□ -0.93
CHD3-210ENST00000479080 TRGV2A0A075B6R0 118 aa9.22□□□□□ -0.93
CHD3-210ENST00000479080 A0A1B0GW15 77 aa9.22□□□□□ -0.93
CHD3-210ENST00000479080 TRGC1P0CF51 173 aa9.22□□□□□ -0.93
CHD3-210ENST00000479080 RAB4AP20338 218 aa9.22□□□□□ -0.93
CHD3-210ENST00000479080 SLAQ13239 276 aa9.22□□□□□ -0.93
CHD3-210ENST00000479080 FAM74A4Q5TZK3 123 aa9.22□□□□□ -0.93
CHD3-210ENST00000479080 FAM104BQ5XKR9 115 aa9.22□□□□□ -0.93
CHD3-210ENST00000479080 RASL11AQ6T310 242 aa9.22□□□□□ -0.93
CHD3-210ENST00000479080 OR4C5Q8NGB2 326 aa9.22□□□□□ -0.93
CHD3-210ENST00000479080 TRAV26-2A0A0B4J265 109 aa9.21□□□□□ -0.94
CHD3-210ENST00000479080 TEX48A0A1B0GUV7 120 aa9.21□□□□□ -0.94
CHD3-210ENST00000479080 SMKR1H3BMG3 65 aa9.21□□□□□ -0.94
CHD3-210ENST00000479080 PHOX2AO14813 284 aa9.21□□□□□ -0.94
CHD3-210ENST00000479080 GATA1P15976 413 aaPredicted RBP9.21□□□□□ -0.94
CHD3-210ENST00000479080 MRPL51Q4U2R6 128 aaKnown RBP9.21□□□□□ -0.94
CHD3-210ENST00000479080 SUMO4Q6EEV6 95 aa9.21□□□□□ -0.94
CHD3-210ENST00000479080 C11orf45Q8TAV5 145 aa9.21□□□□□ -0.94
CHD3-210ENST00000479080 MGPP08493 103 aa9.2□□□□□ -0.94
CHD3-210ENST00000479080 P0DMU3 169 aa9.2□□□□□ -0.94
CHD3-210ENST00000479080 FAM231AP0DMU4 169 aa9.2□□□□□ -0.94
CHD3-210ENST00000479080 FAM231CP0DMU5 169 aa9.2□□□□□ -0.94
CHD3-210ENST00000479080 ZFP2Q6ZN57 461 aa9.2□□□□□ -0.94
CHD3-210ENST00000479080 GNB1LQ9BYB4 327 aa9.2□□□□□ -0.94
CHD3-210ENST00000479080 NCR2O95944 276 aa9.19□□□□□ -0.94
CHD3-210ENST00000479080 RAB5AP20339 215 aa9.19□□□□□ -0.94
CHD3-210ENST00000479080 RPS10P46783 165 aaKnown RBP9.19□□□□□ -0.94
CHD3-210ENST00000479080 VSIG2Q96IQ7 327 aa9.19□□□□□ -0.94
CHD3-210ENST00000479080 LOC100131303A0A0U1RQF7 123 aa9.18□□□□□ -0.94
CHD3-210ENST00000479080 M0QY20 66 aa9.18□□□□□ -0.94
CHD3-210ENST00000479080 RHODO00212 210 aa9.18□□□□□ -0.94
CHD3-210ENST00000479080 S100A8P05109 93 aa9.18□□□□□ -0.94
CHD3-210ENST00000479080 ATP5G1P05496 136 aa9.18□□□□□ -0.94
CHD3-210ENST00000479080 RAB4BP61018 213 aa9.18□□□□□ -0.94
CHD3-210ENST00000479080 KIAA1644Q3SXP7 199 aa9.18□□□□□ -0.94
CHD3-210ENST00000479080 SLC25A29Q8N8R3 303 aa9.18□□□□□ -0.94
CHD3-210ENST00000479080 MRPL18Q9H0U6 180 aaKnown RBP9.18□□□□□ -0.94
CHD3-210ENST00000479080 HLA-DQA1P01909 254 aa9.17□□□□□ -0.94
CHD3-210ENST00000479080 HTN3P15516 51 aa9.17□□□□□ -0.94
CHD3-210ENST00000479080 ZNF56Q15929 161 aa9.17□□□□□ -0.94
CHD3-210ENST00000479080 NRACQ8N912 160 aa9.17□□□□□ -0.94
CHD3-210ENST00000479080 RPL39LQ96EH5 51 aaKnown RBP9.17□□□□□ -0.94
CHD3-210ENST00000479080 D6R8Y8 96 aa9.16□□□□□ -0.94
CHD3-210ENST00000479080 SMIM17P0DL12 118 aa9.16□□□□□ -0.94
CHD3-210ENST00000479080 LINC00694P0DN24 101 aa9.16□□□□□ -0.94
CHD3-210ENST00000479080 CRYBA4P53673 196 aa9.16□□□□□ -0.94
CHD3-210ENST00000479080 FABP9Q0Z7S8 132 aa9.16□□□□□ -0.94
CHD3-210ENST00000479080 COX19Q49B96 90 aa9.16□□□□□ -0.94
CHD3-210ENST00000479080 NEXN-AS1Q8NBZ9 246 aa9.16□□□□□ -0.94
CHD3-210ENST00000479080 CSMD3Q7Z407 3707 aa9.15□□□□□ -0.94
CHD3-210ENST00000479080 TRGV4A0A0C4DH28 118 aa9.15□□□□□ -0.94
CHD3-210ENST00000479080 K7EQD1 137 aa9.15□□□□□ -0.94
CHD3-210ENST00000479080 CIDEAO60543 219 aa9.15□□□□□ -0.94
CHD3-210ENST00000479080 NPYP01303 97 aa9.15□□□□□ -0.94
CHD3-210ENST00000479080 APCSP02743 223 aa9.15□□□□□ -0.94
CHD3-210ENST00000479080 MT-ND6P03923 174 aa9.15□□□□□ -0.94
CHD3-210ENST00000479080 TRGC2P03986 189 aa9.15□□□□□ -0.94
CHD3-210ENST00000479080 SMIM15Q7Z3B0 74 aa9.15□□□□□ -0.94
CHD3-210ENST00000479080 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.15□□□□□ -0.94
CHD3-210ENST00000479080 TRAPPC1Q9Y5R8 145 aa9.15□□□□□ -0.94
CHD3-210ENST00000479080 DEFB131BA0A096LNP1 70 aa9.14□□□□□ -0.95
CHD3-210ENST00000479080 A0A0J9YY99 117 aa9.14□□□□□ -0.95
CHD3-210ENST00000479080 TRBV6-4A0A1B0GX49 114 aa9.14□□□□□ -0.95
CHD3-210ENST00000479080 F5H697 171 aa9.14□□□□□ -0.95
CHD3-210ENST00000479080 F5H768 121 aa9.14□□□□□ -0.95
CHD3-210ENST00000479080 MRAP2Q96G30 205 aa9.14□□□□□ -0.95
CHD3-210ENST00000479080 ALKBH7Q9BT30 221 aaPredicted RBP9.14□□□□□ -0.95
CHD3-210ENST00000479080 PRO0255Q9UI72 69 aa9.14□□□□□ -0.95
CHD3-210ENST00000479080 TRAV26-1A0A087WT03 109 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms