RNA–Protein interactions for RNA: ENST00000478999.1

VPS45-208, Transcript of vacuolar protein sorting 45 homolog, human

TSL 2

Gene VPS45, Length 468 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS45-208	ENST00000478999	LEP	P41159	167 aa		6.27	□□□□□ -1.41
VPS45-208	ENST00000478999	RPL32	P62910	135 aa	Known RBP	6.27	□□□□□ -1.41
VPS45-208	ENST00000478999	CASC10	Q5T4H9	136 aa		6.27	□□□□□ -1.41
VPS45-208	ENST00000478999	OR9G4	Q8NGQ1	327 aa		6.27	□□□□□ -1.41
VPS45-208	ENST00000478999	OR2K2	Q8NGT1	345 aa		6.27	□□□□□ -1.41
VPS45-208	ENST00000478999	DUX3	Q96PT4	197 aa		6.27	□□□□□ -1.41
VPS45-208	ENST00000478999	C20orf78	Q9BR46	151 aa		6.27	□□□□□ -1.41
VPS45-208	ENST00000478999	KLK15	Q9H2R5	256 aa		6.27	□□□□□ -1.41
VPS45-208	ENST00000478999	DPH3P1	Q9H4G8	78 aa		6.27	□□□□□ -1.41
VPS45-208	ENST00000478999	C11orf21	Q9P2W6	132 aa		6.27	□□□□□ -1.41
VPS45-208	ENST00000478999	HLA-DRB4	X5D2U9	266 aa		6.27	□□□□□ -1.41
VPS45-208	ENST00000478999	KLLN	B2CW77	178 aa		6.26	□□□□□ -1.41
VPS45-208	ENST00000478999	CCL24	O00175	119 aa		6.26	□□□□□ -1.41
VPS45-208	ENST00000478999	IGHV3-11	P01762	117 aa		6.26	□□□□□ -1.41
VPS45-208	ENST00000478999	LGALS1	P09382	135 aa	Known RBP	6.26	□□□□□ -1.41
VPS45-208	ENST00000478999	S100A4	P26447	101 aa	Known RBP	6.26	□□□□□ -1.41
VPS45-208	ENST00000478999	SNRPD3	P62318	126 aa	Known RBP	6.26	□□□□□ -1.41
VPS45-208	ENST00000478999	BATF	Q16520	125 aa		6.26	□□□□□ -1.41
VPS45-208	ENST00000478999	DEFB136	Q30KP8	78 aa		6.26	□□□□□ -1.41
VPS45-208	ENST00000478999	MAJIN	Q3KP22	176 aa		6.26	□□□□□ -1.41
VPS45-208	ENST00000478999	ORMDL2	Q53FV1	153 aa		6.26	□□□□□ -1.41
VPS45-208	ENST00000478999	TM4SF20	Q53R12	229 aa		6.26	□□□□□ -1.41
VPS45-208	ENST00000478999	C9orf66	Q5T8R8	295 aa		6.26	□□□□□ -1.41
VPS45-208	ENST00000478999	LCNL1	Q6ZST4	164 aa		6.26	□□□□□ -1.41
VPS45-208	ENST00000478999	C18orf65	Q6ZTR6	163 aa		6.26	□□□□□ -1.41
VPS45-208	ENST00000478999	POM121L12	Q8N7R1	296 aa		6.26	□□□□□ -1.41
VPS45-208	ENST00000478999	NRAC	Q8N912	160 aa		6.26	□□□□□ -1.41
VPS45-208	ENST00000478999	AP1S3	Q96PC3	154 aa		6.26	□□□□□ -1.41
VPS45-208	ENST00000478999	SORL1	Q92673	2214 aa		6.26	□□□□□ -1.41
VPS45-208	ENST00000478999	STAB2	Q8WWQ8	2551 aa		6.25	□□□□□ -1.41
VPS45-208	ENST00000478999	IGLV2-18	A0A075B6J9	118 aa		6.25	□□□□□ -1.41
VPS45-208	ENST00000478999	TRAV2	A0A0B4J234	112 aa		6.25	□□□□□ -1.41
VPS45-208	ENST00000478999	LCE6A	A0A183	80 aa		6.25	□□□□□ -1.41
VPS45-208	ENST00000478999	hDV102S1	A0JD36	115 aa		6.25	□□□□□ -1.41
VPS45-208	ENST00000478999		H3BVH4	76 aa		6.25	□□□□□ -1.41
VPS45-208	ENST00000478999	DUSP14	O95147	198 aa	Known RBP	6.25	□□□□□ -1.41
VPS45-208	ENST00000478999	NCR2	O95944	276 aa		6.25	□□□□□ -1.41
VPS45-208	ENST00000478999	ZNF25	P17030	456 aa	Predicted RBP	6.25	□□□□□ -1.41
VPS45-208	ENST00000478999	RPL11	P62913	178 aa	Known RBP	6.25	□□□□□ -1.41
VPS45-208	ENST00000478999	SEC11A	P67812	179 aa		6.25	□□□□□ -1.41
VPS45-208	ENST00000478999	LAGE3	Q14657	143 aa		6.25	□□□□□ -1.41
VPS45-208	ENST00000478999	DCANP1	Q8TF63	244 aa		6.25	□□□□□ -1.41
VPS45-208	ENST00000478999	UBE2E2	Q96LR5	201 aa		6.25	□□□□□ -1.41
VPS45-208	ENST00000478999	TMEM208	Q9BTX3	173 aa		6.25	□□□□□ -1.41
VPS45-208	ENST00000478999	MSRB1	Q9NZV6	116 aa		6.25	□□□□□ -1.41
VPS45-208	ENST00000478999	PHLDA3	Q9Y5J5	127 aa		6.25	□□□□□ -1.41
VPS45-208	ENST00000478999	SMKR1	H3BMG3	65 aa		6.24	□□□□□ -1.41
VPS45-208	ENST00000478999	EVI2A	P22794	236 aa		6.24	□□□□□ -1.41
VPS45-208	ENST00000478999	PRR9	Q5T870	116 aa		6.24	□□□□□ -1.41
VPS45-208	ENST00000478999	STPG4	Q8N801	248 aa		6.24	□□□□□ -1.41
VPS45-208	ENST00000478999	C4orf3	Q8WVX3	66 aa		6.24	□□□□□ -1.41
VPS45-208	ENST00000478999	RAX2	Q96IS3	184 aa		6.24	□□□□□ -1.41
VPS45-208	ENST00000478999	SMIM2	Q9BVW6	85 aa		6.24	□□□□□ -1.41
VPS45-208	ENST00000478999	ZMAT4	Q9H898	229 aa		6.24	□□□□□ -1.41
VPS45-208	ENST00000478999	COX11	Q9Y6N1	276 aa		6.24	□□□□□ -1.41
VPS45-208	ENST00000478999	TRAV12-1	A0A0B4J245	112 aa		6.23	□□□□□ -1.41
VPS45-208	ENST00000478999	MUC21	A0A0G2JKD1	596 aa		6.23	□□□□□ -1.41
VPS45-208	ENST00000478999	MUC21	A0A140T8X8	626 aa		6.23	□□□□□ -1.41
VPS45-208	ENST00000478999		H0Y8G0	127 aa		6.23	□□□□□ -1.41
VPS45-208	ENST00000478999	PLN	P26678	52 aa		6.23	□□□□□ -1.41
VPS45-208	ENST00000478999	SUMO2	P61956	95 aa	Known RBP	6.23	□□□□□ -1.41
VPS45-208	ENST00000478999	EGFEM1P	Q0D2K5	195 aa		6.23	□□□□□ -1.41
VPS45-208	ENST00000478999	ANXA2R	Q3ZCQ2	193 aa		6.23	□□□□□ -1.41
VPS45-208	ENST00000478999	MUC21	Q5SSG8	566 aa		6.23	□□□□□ -1.41
VPS45-208	ENST00000478999	BVES-AS1	Q5T3Y7	98 aa		6.23	□□□□□ -1.41
VPS45-208	ENST00000478999	FAM159A	Q6UWV7	190 aa		6.23	□□□□□ -1.41
VPS45-208	ENST00000478999	BOD1L2	Q8IYS8	172 aa		6.23	□□□□□ -1.41
VPS45-208	ENST00000478999	OR11H1	Q8NG94	326 aa		6.23	□□□□□ -1.41
VPS45-208	ENST00000478999	MUC7	Q8TAX7	377 aa		6.23	□□□□□ -1.41
VPS45-208	ENST00000478999	IGHV4OR15-8	A0A075B7B6	117 aa		6.22	□□□□□ -1.41
VPS45-208	ENST00000478999		A0A087WW49	117 aa		6.22	□□□□□ -1.41
VPS45-208	ENST00000478999	C7orf71	A4D174	169 aa		6.22	□□□□□ -1.41
VPS45-208	ENST00000478999		K7EQG2	157 aa		6.22	□□□□□ -1.41
VPS45-208	ENST00000478999	DPM2	O94777	84 aa		6.22	□□□□□ -1.41
VPS45-208	ENST00000478999	NHLRC4	P0CG21	123 aa	Predicted RBP	6.22	□□□□□ -1.41
VPS45-208	ENST00000478999	SMIM17	P0DL12	118 aa		6.22	□□□□□ -1.41
VPS45-208	ENST00000478999	PRB4	P10163	310 aa	Predicted RBP	6.22	□□□□□ -1.41
VPS45-208	ENST00000478999	FGF6	P10767	208 aa		6.22	□□□□□ -1.41
VPS45-208	ENST00000478999	RNASE4	P34096	147 aa	Known RBP	6.22	□□□□□ -1.41
VPS45-208	ENST00000478999	HINT1	P49773	126 aa	Predicted RBP	6.22	□□□□□ -1.41
VPS45-208	ENST00000478999	HSD52	Q0P140	79 aa		6.22	□□□□□ -1.41
VPS45-208	ENST00000478999	ODF1	Q14990	250 aa		6.22	□□□□□ -1.41
VPS45-208	ENST00000478999	FOXI2	Q6ZQN5	318 aa		6.22	□□□□□ -1.41
VPS45-208	ENST00000478999	SYT8	Q8NBV8	401 aa		6.22	□□□□□ -1.41
VPS45-208	ENST00000478999	HIGD1B	Q9P298	99 aa		6.22	□□□□□ -1.41
VPS45-208	ENST00000478999	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	6.22	□□□□□ -1.41
VPS45-208	ENST00000478999	HYDIN	Q4G0P3	5121 aa		6.22	□□□□□ -1.41
VPS45-208	ENST00000478999		A0A0J9YX75	114 aa		6.21	□□□□□ -1.42
VPS45-208	ENST00000478999		A6NDN8	102 aa		6.21	□□□□□ -1.42
VPS45-208	ENST00000478999	NUDT3	O95989	172 aa		6.21	□□□□□ -1.42
VPS45-208	ENST00000478999	IGKC	P01834	107 aa		6.21	□□□□□ -1.42
VPS45-208	ENST00000478999	PRSS1	P07477	247 aa		6.21	□□□□□ -1.42
VPS45-208	ENST00000478999	RNASE3	P12724	160 aa	Known RBP	6.21	□□□□□ -1.42
VPS45-208	ENST00000478999	ZNF256	Q9Y2P7	627 aa	Predicted RBP	6.21	□□□□□ -1.42
VPS45-208	ENST00000478999	TRGV11	A0A075B6L2	103 aa		6.2	□□□□□ -1.42
VPS45-208	ENST00000478999		A0A087WX48	190 aa		6.2	□□□□□ -1.42
VPS45-208	ENST00000478999		A8MTW9	85 aa		6.2	□□□□□ -1.42
VPS45-208	ENST00000478999	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	6.2	□□□□□ -1.42
VPS45-208	ENST00000478999	SAP30	O75446	220 aa		6.2	□□□□□ -1.42
VPS45-208	ENST00000478999	INSL3	P51460	131 aa		6.2	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms