RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 SLC48A1Q6P1K1 146 aa0.87□□□□□ -2.27
VLDLR-204ENST00000478776 Q86TA4 180 aa0.87□□□□□ -2.27
VLDLR-204ENST00000478776 Q8N6K4 173 aa0.87□□□□□ -2.27
VLDLR-204ENST00000478776 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.87□□□□□ -2.27
VLDLR-204ENST00000478776 IFI27L1Q96BM0 104 aa0.87□□□□□ -2.27
VLDLR-204ENST00000478776 TMEM141Q96I45 108 aa0.87□□□□□ -2.27
VLDLR-204ENST00000478776 LINC00208Q96KT6 92 aa0.87□□□□□ -2.27
VLDLR-204ENST00000478776 C2orf88Q9BSF0 95 aa0.87□□□□□ -2.27
VLDLR-204ENST00000478776 SMG6Q86US8 1419 aaKnown RBP0.87□□□□□ -2.27
VLDLR-204ENST00000478776 ROS1P08922 2347 aa0.87□□□□□ -2.27
VLDLR-204ENST00000478776 CNTRLQ7Z7A1 2325 aa0.87□□□□□ -2.27
VLDLR-204ENST00000478776 LAMA4Q16363 1823 aa0.87□□□□□ -2.27
VLDLR-204ENST00000478776 EIF4G3O43432 1585 aaKnown RBP0.87□□□□□ -2.27
VLDLR-204ENST00000478776 MUC22E2RYF6 1773 aaPredicted RBP0.86□□□□□ -2.27
VLDLR-204ENST00000478776 C9orf116Q5BN46 136 aaPredicted RBP0.86□□□□□ -2.27
VLDLR-204ENST00000478776 TSKUQ8WUA8 353 aa0.86□□□□□ -2.27
VLDLR-204ENST00000478776 AGPAT4-IT1Q9H0P7 198 aa0.86□□□□□ -2.27
VLDLR-204ENST00000478776 RERGLQ9H628 205 aa0.86□□□□□ -2.27
VLDLR-204ENST00000478776 BCORL1Q5H9F3 1711 aa0.86□□□□□ -2.27
VLDLR-204ENST00000478776 ZNF518AQ6AHZ1 1483 aa0.86□□□□□ -2.27
VLDLR-204ENST00000478776 TRAV12-3A0A0B4J271 114 aa0.85□□□□□ -2.27
VLDLR-204ENST00000478776 TCRBV3S1A0A5B6 114 aa0.85□□□□□ -2.27
VLDLR-204ENST00000478776 LINC00587B1AMM8 73 aa0.85□□□□□ -2.27
VLDLR-204ENST00000478776 SNCGO76070 127 aa0.85□□□□□ -2.27
VLDLR-204ENST00000478776 HIST1H1DP16402 221 aaKnown RBP0.85□□□□□ -2.27
VLDLR-204ENST00000478776 KLKP1Q107X0 134 aa0.85□□□□□ -2.27
VLDLR-204ENST00000478776 ZNF56Q15929 161 aa0.85□□□□□ -2.27
VLDLR-204ENST00000478776 CYP2G1PQ6ZSU1 146 aa0.85□□□□□ -2.27
VLDLR-204ENST00000478776 PPP1R1CQ8WVI7 109 aa0.85□□□□□ -2.27
VLDLR-204ENST00000478776 SEC11CQ9BY50 192 aa0.85□□□□□ -2.27
VLDLR-204ENST00000478776 NAA60Q9H7X0 242 aa0.85□□□□□ -2.27
VLDLR-204ENST00000478776 SERP1Q9Y6X1 66 aa0.85□□□□□ -2.27
VLDLR-204ENST00000478776 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
VLDLR-204ENST00000478776 SPAG17Q6Q759 2223 aa0.84□□□□□ -2.27
VLDLR-204ENST00000478776 LOC100130705A0A1B0GUX0 176 aa0.84□□□□□ -2.27
VLDLR-204ENST00000478776 A6NIN4 97 aa0.84□□□□□ -2.27
VLDLR-204ENST00000478776 K7EIL1 84 aa0.84□□□□□ -2.27
VLDLR-204ENST00000478776 IFNA17P01571 189 aa0.84□□□□□ -2.27
VLDLR-204ENST00000478776 SPTBP11277 2137 aa0.84□□□□□ -2.27
VLDLR-204ENST00000478776 CBLN1P23435 193 aa0.84□□□□□ -2.27
VLDLR-204ENST00000478776 NPC2P61916 151 aa0.84□□□□□ -2.27
VLDLR-204ENST00000478776 Q6AWC8 147 aa0.84□□□□□ -2.27
VLDLR-204ENST00000478776 RPL7L1Q6DKI1 246 aaKnown RBP0.84□□□□□ -2.27
VLDLR-204ENST00000478776 TMEM203Q969S6 136 aa0.84□□□□□ -2.27
VLDLR-204ENST00000478776 RPRMQ9NS64 109 aa0.84□□□□□ -2.27
VLDLR-204ENST00000478776 COA4Q9NYJ1 87 aa0.84□□□□□ -2.27
VLDLR-204ENST00000478776 PLXNA1Q9UIW2 1896 aa0.84□□□□□ -2.28
VLDLR-204ENST00000478776 KDM6BO15054 1643 aa0.83□□□□□ -2.28
VLDLR-204ENST00000478776 FXYD1O00168 92 aa0.83□□□□□ -2.28
VLDLR-204ENST00000478776 AKAIN1P0CW23 69 aa0.83□□□□□ -2.28
VLDLR-204ENST00000478776 UBE2G1P62253 170 aa0.83□□□□□ -2.28
VLDLR-204ENST00000478776 C12orf73Q69YU5 71 aa0.83□□□□□ -2.28
VLDLR-204ENST00000478776 PP6455Q8WZ26 134 aa0.83□□□□□ -2.28
VLDLR-204ENST00000478776 BET1LQ9NYM9 111 aa0.83□□□□□ -2.28
VLDLR-204ENST00000478776 A2ML1A8K2U0 1454 aa0.83□□□□□ -2.28
VLDLR-204ENST00000478776 RIMS1Q86UR5 1692 aaKnown RBP0.83□□□□□ -2.28
VLDLR-204ENST00000478776 FAM135AQ9P2D6 1515 aa0.83□□□□□ -2.28
VLDLR-204ENST00000478776 QRICH2Q9H0J4 1663 aa0.82□□□□□ -2.28
VLDLR-204ENST00000478776 IFT140Q96RY7 1462 aa0.82□□□□□ -2.28
VLDLR-204ENST00000478776 MED12Q93074 2177 aa0.82□□□□□ -2.28
VLDLR-204ENST00000478776 NRXN2Q9P2S2 1712 aa0.82□□□□□ -2.28
VLDLR-204ENST00000478776 MCRIP1C9JLW8 97 aa0.82□□□□□ -2.28
VLDLR-204ENST00000478776 IFNGP01579 166 aa0.82□□□□□ -2.28
VLDLR-204ENST00000478776 CCL3L1P16619 93 aa0.82□□□□□ -2.28
VLDLR-204ENST00000478776 SPINK13Q1W4C9 94 aa0.82□□□□□ -2.28
VLDLR-204ENST00000478776 Q56UQ5 140 aa0.82□□□□□ -2.28
VLDLR-204ENST00000478776 PLAC4Q8WY50 150 aa0.82□□□□□ -2.28
VLDLR-204ENST00000478776 LSM10Q969L4 123 aaKnown RBP0.82□□□□□ -2.28
VLDLR-204ENST00000478776 TMEM14BQ9NUH8 114 aa0.82□□□□□ -2.28
VLDLR-204ENST00000478776 SCN3BQ9NY72 215 aa0.82□□□□□ -2.28
VLDLR-204ENST00000478776 MAP2P11137 1827 aaKnown RBP0.81□□□□□ -2.28
VLDLR-204ENST00000478776 PHIPQ8WWQ0 1821 aa0.81□□□□□ -2.28
VLDLR-204ENST00000478776 PIGBOS1A0A0B4J2F0 54 aa0.81□□□□□ -2.28
VLDLR-204ENST00000478776 TRBV10-3A0A0K0K1G6 114 aa0.81□□□□□ -2.28
VLDLR-204ENST00000478776 SPAARA0A1B0GVQ0 90 aa0.81□□□□□ -2.28
VLDLR-204ENST00000478776 SSBP1Q04837 148 aaKnown RBP0.81□□□□□ -2.28
VLDLR-204ENST00000478776 C10orf82Q8WW14 230 aa0.81□□□□□ -2.28
VLDLR-204ENST00000478776 CUL7Q14999 1698 aa0.81□□□□□ -2.28
VLDLR-204ENST00000478776 ESPL1Q14674 2120 aa0.8□□□□□ -2.28
VLDLR-204ENST00000478776 PARP14Q460N5 1801 aa0.8□□□□□ -2.28
VLDLR-204ENST00000478776 RBAKDNA6NC62 111 aa0.8□□□□□ -2.28
VLDLR-204ENST00000478776 F6UZH7 168 aa0.8□□□□□ -2.28
VLDLR-204ENST00000478776 CORTO00230 105 aa0.8□□□□□ -2.28
VLDLR-204ENST00000478776 TNFP01375 233 aa0.8□□□□□ -2.28
VLDLR-204ENST00000478776 UBE2D1P51668 147 aa0.8□□□□□ -2.28
VLDLR-204ENST00000478776 FXYD6P3P58550 94 aa0.8□□□□□ -2.28
VLDLR-204ENST00000478776 ELOF1P60002 83 aaKnown RBP0.8□□□□□ -2.28
VLDLR-204ENST00000478776 CCL8P80075 99 aa0.8□□□□□ -2.28
VLDLR-204ENST00000478776 WHAMMP3Q1A5X7 153 aa0.8□□□□□ -2.28
VLDLR-204ENST00000478776 S100A7L2Q5SY68 101 aa0.8□□□□□ -2.28
VLDLR-204ENST00000478776 ZNF818PQ6ZRF7 136 aa0.8□□□□□ -2.28
VLDLR-204ENST00000478776 C20orf197Q8N268 126 aa0.8□□□□□ -2.28
VLDLR-204ENST00000478776 Q8N8P6 123 aa0.8□□□□□ -2.28
VLDLR-204ENST00000478776 DSCR8Q96T75 97 aa0.8□□□□□ -2.28
VLDLR-204ENST00000478776 NWD2Q9ULI1 1742 aa0.8□□□□□ -2.28
VLDLR-204ENST00000478776 KIAA0100Q14667 2235 aaKnown RBP0.8□□□□□ -2.28
VLDLR-204ENST00000478776 ABCA4P78363 2273 aa0.8□□□□□ -2.28
VLDLR-204ENST00000478776 MYOM2P54296 1465 aa0.8□□□□□ -2.28
VLDLR-204ENST00000478776 TENM3Q9P273 2699 aa0.79□□□□□ -2.28
VLDLR-204ENST00000478776 A0A096LNT2 108 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms