RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 NOP10Q9NPE3 64 aaKnown RBP4.38□□□□□ -1.71
HOXB3-209ENST00000478644 TMEM167BQ9NRX6 74 aa4.38□□□□□ -1.71
HOXB3-209ENST00000478644 NAGKQ9UJ70 344 aa4.38□□□□□ -1.71
HOXB3-209ENST00000478644 LENEPQ9Y5L5 61 aa4.38□□□□□ -1.71
HOXB3-209ENST00000478644 IGLV2-18A0A075B6J9 118 aa4.37□□□□□ -1.71
HOXB3-209ENST00000478644 TRGV2A0A075B6R0 118 aa4.37□□□□□ -1.71
HOXB3-209ENST00000478644 TRAV12-3A0A0B4J271 114 aa4.37□□□□□ -1.71
HOXB3-209ENST00000478644 CTXND1A0A1B0GTU2 59 aa4.37□□□□□ -1.71
HOXB3-209ENST00000478644 A0A1B0GW15 77 aa4.37□□□□□ -1.71
HOXB3-209ENST00000478644 KANTRA0A1W2PQU2 76 aa4.37□□□□□ -1.71
HOXB3-209ENST00000478644 A0A1W2PRE2 83 aa4.37□□□□□ -1.71
HOXB3-209ENST00000478644 C7orf71A4D174 169 aa4.37□□□□□ -1.71
HOXB3-209ENST00000478644 UMAD1C9J7I0 102 aa4.37□□□□□ -1.71
HOXB3-209ENST00000478644 HMGB3O15347 200 aaKnown RBP4.37□□□□□ -1.71
HOXB3-209ENST00000478644 PRM2P04554 102 aa4.37□□□□□ -1.71
HOXB3-209ENST00000478644 GPX1P07203 203 aa4.37□□□□□ -1.71
HOXB3-209ENST00000478644 SEC11BP0C7V7 166 aa4.37□□□□□ -1.71
HOXB3-209ENST00000478644 RNASE4P34096 147 aaKnown RBP4.37□□□□□ -1.71
HOXB3-209ENST00000478644 EIF5AP63241 154 aaKnown RBP4.37□□□□□ -1.71
HOXB3-209ENST00000478644 CD300CQ08708 224 aa4.37□□□□□ -1.71
HOXB3-209ENST00000478644 OR5I1Q13606 314 aa4.37□□□□□ -1.71
HOXB3-209ENST00000478644 TMUB2Q71RG4 321 aa4.37□□□□□ -1.71
HOXB3-209ENST00000478644 SSX7Q7RTT5 188 aa4.37□□□□□ -1.71
HOXB3-209ENST00000478644 SH2D6Q7Z4S9 175 aa4.37□□□□□ -1.71
HOXB3-209ENST00000478644 EIF4E3Q8N5X7 224 aaKnown RBP4.37□□□□□ -1.71
HOXB3-209ENST00000478644 ISOC2Q96AB3 205 aa4.37□□□□□ -1.71
HOXB3-209ENST00000478644 HYLS1Q96M11 299 aa4.37□□□□□ -1.71
HOXB3-209ENST00000478644 URGCP-MRPS24S4R325 110 aa4.37□□□□□ -1.71
HOXB3-209ENST00000478644 DNAH6Q9C0G6 4158 aa4.37□□□□□ -1.71
HOXB3-209ENST00000478644 IGLV9-49A0A0B4J1Y8 123 aa4.36□□□□□ -1.71
HOXB3-209ENST00000478644 C1QBP02746 253 aa4.36□□□□□ -1.71
HOXB3-209ENST00000478644 ORM1P02763 201 aa4.36□□□□□ -1.71
HOXB3-209ENST00000478644 TCRAP04437 139 aa4.36□□□□□ -1.71
HOXB3-209ENST00000478644 BTN1A1Q13410 526 aa4.36□□□□□ -1.71
HOXB3-209ENST00000478644 DPPA3Q6W0C5 159 aa4.36□□□□□ -1.71
HOXB3-209ENST00000478644 GOLT1AQ6ZVE7 132 aa4.36□□□□□ -1.71
HOXB3-209ENST00000478644 C5orf17Q8NAS9 161 aa4.36□□□□□ -1.71
HOXB3-209ENST00000478644 STOML3Q8TAV4 291 aa4.36□□□□□ -1.71
HOXB3-209ENST00000478644 MBD3L1Q8WWY6 194 aa4.36□□□□□ -1.71
HOXB3-209ENST00000478644 ZNF471Q9BX82 626 aaPredicted RBP4.36□□□□□ -1.71
HOXB3-209ENST00000478644 NKX6-2Q9C056 277 aaPredicted RBP4.36□□□□□ -1.71
HOXB3-209ENST00000478644 TP53TG3Q9ULZ0 132 aa4.36□□□□□ -1.71
HOXB3-209ENST00000478644 EPDR1Q9UM22 224 aa4.36□□□□□ -1.71
HOXB3-209ENST00000478644 MRPS16Q9Y3D3 137 aaKnown RBP4.36□□□□□ -1.71
HOXB3-209ENST00000478644 LINC00588Q9Y4M8 146 aa4.36□□□□□ -1.71
HOXB3-209ENST00000478644 DNAH10Q8IVF4 4471 aa4.36□□□□□ -1.71
HOXB3-209ENST00000478644 VPS13DQ5THJ4 4388 aa4.36□□□□□ -1.71
HOXB3-209ENST00000478644 MAP1LC3B2A6NCE7 125 aa4.35□□□□□ -1.71
HOXB3-209ENST00000478644 C16orf90A8MZG2 172 aa4.35□□□□□ -1.71
HOXB3-209ENST00000478644 GGTLC3B5MD39 225 aa4.35□□□□□ -1.71
HOXB3-209ENST00000478644 PFDN1O60925 122 aa4.35□□□□□ -1.71
HOXB3-209ENST00000478644 TPT1P13693 172 aaKnown RBP4.35□□□□□ -1.71
HOXB3-209ENST00000478644 LGALSLQ3ZCW2 172 aaPredicted RBP4.35□□□□□ -1.71
HOXB3-209ENST00000478644 PRR9Q5T870 116 aa4.35□□□□□ -1.71
HOXB3-209ENST00000478644 Q6AWC8 147 aa4.35□□□□□ -1.71
HOXB3-209ENST00000478644 C11orf72Q8NBR9 251 aa4.35□□□□□ -1.71
HOXB3-209ENST00000478644 Q8TAT8 98 aa4.35□□□□□ -1.71
HOXB3-209ENST00000478644 TVP23CQ96ET8 276 aa4.35□□□□□ -1.71
HOXB3-209ENST00000478644 TCEAL7Q9BRU2 100 aa4.35□□□□□ -1.71
HOXB3-209ENST00000478644 MAP1LC3BQ9GZQ8 125 aa4.35□□□□□ -1.71
HOXB3-209ENST00000478644 PRO0255Q9UI72 69 aa4.35□□□□□ -1.71
HOXB3-209ENST00000478644 ICOSQ9Y6W8 199 aa4.35□□□□□ -1.71
HOXB3-209ENST00000478644 ARL2-SNX15V9GYD0 113 aa4.35□□□□□ -1.71
HOXB3-209ENST00000478644 HERC2O95714 4834 aa4.35□□□□□ -1.71
HOXB3-209ENST00000478644 IGHV1OR15-1A0A075B7D0 117 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 IGLV5-45A0A087WSX0 123 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 IGLV5-52A0A0A0MRZ9 124 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 TRAV1-1A0A0B4J248 108 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 SNAI2O43623 268 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 SPINK4O60575 86 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 IGLV2-11P01706 119 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 MT3P25713 68 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 RAB5CP51148 216 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 FGF8P55075 233 aaPredicted RBP4.34□□□□□ -1.71
HOXB3-209ENST00000478644 XGP55808 180 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 TCL1AP56279 114 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 GNG5P63218 68 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 TDRG1Q3Y452 100 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 EIF5AL1Q6IS14 154 aaKnown RBP4.34□□□□□ -1.71
HOXB3-209ENST00000478644 Q6ZQT7 251 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 AKAP14Q86UN6 197 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 C10orf126Q8N4M7 172 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 CYB561D1Q8N8Q1 229 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 TMEM75Q8N9X5 138 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 LYPD6BQ8NI32 183 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 SFT2D1Q8WV19 159 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 HIST1H2BAQ96A08 127 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 KCNS1Q96KK3 526 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 C2orf48Q96LS8 159 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 TXNDC17Q9BRA2 123 aa4.34□□□□□ -1.71
HOXB3-209ENST00000478644 IGLV5-37A0A075B6J1 123 aa4.33□□□□□ -1.72
HOXB3-209ENST00000478644 TRGV1A0A0A0MS02 117 aa4.33□□□□□ -1.72
HOXB3-209ENST00000478644 TRAV8-1A0A0A6YYK1 113 aa4.33□□□□□ -1.72
HOXB3-209ENST00000478644 TRAV21A0A0B4J279 112 aa4.33□□□□□ -1.72
HOXB3-209ENST00000478644 TRBV6-1A0A0K0K1D8 114 aa4.33□□□□□ -1.72
HOXB3-209ENST00000478644 IFNA7P01567 189 aa4.33□□□□□ -1.72
HOXB3-209ENST00000478644 FLI1Q01543 452 aaPredicted RBP4.33□□□□□ -1.72
HOXB3-209ENST00000478644 ESRGQ1W209 222 aa4.33□□□□□ -1.72
HOXB3-209ENST00000478644 KRTAP5-11Q6L8G4 156 aa4.33□□□□□ -1.72
HOXB3-209ENST00000478644 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms