RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 COX8CQ7Z4L0 72 aa9.65□□□□□ -0.86
SMARCE1-209ENST00000478349 ZFP82Q8N141 532 aa9.65□□□□□ -0.86
SMARCE1-209ENST00000478349 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.65□□□□□ -0.86
SMARCE1-209ENST00000478349 APOBP04114 4563 aaKnown RBP9.65□□□□□ -0.87
SMARCE1-209ENST00000478349 TRBV6-1A0A0K0K1D8 114 aa9.64□□□□□ -0.87
SMARCE1-209ENST00000478349 KRBOX1C9JBD0 128 aa9.64□□□□□ -0.87
SMARCE1-209ENST00000478349 M0R036 132 aa9.64□□□□□ -0.87
SMARCE1-209ENST00000478349 SH2D1AO60880 128 aa9.64□□□□□ -0.87
SMARCE1-209ENST00000478349 ARMS2P0C7Q2 107 aa9.64□□□□□ -0.87
SMARCE1-209ENST00000478349 AKR1C3P42330 323 aa9.64□□□□□ -0.87
SMARCE1-209ENST00000478349 Q5BKY6 102 aa9.64□□□□□ -0.87
SMARCE1-209ENST00000478349 CHCHD7Q9BUK0 85 aa9.64□□□□□ -0.87
SMARCE1-209ENST00000478349 A0A087WX48 190 aa9.63□□□□□ -0.87
SMARCE1-209ENST00000478349 TRBV10-1A0A0K0K1A3 114 aa9.63□□□□□ -0.87
SMARCE1-209ENST00000478349 ARPC5O15511 151 aa9.63□□□□□ -0.87
SMARCE1-209ENST00000478349 S100A9P06702 114 aaKnown RBP9.63□□□□□ -0.87
SMARCE1-209ENST00000478349 RPL36AP83881 106 aaKnown RBP9.63□□□□□ -0.87
SMARCE1-209ENST00000478349 CST9LP1Q5W188 147 aa9.63□□□□□ -0.87
SMARCE1-209ENST00000478349 RPL36ALQ969Q0 106 aaKnown RBP9.63□□□□□ -0.87
SMARCE1-209ENST00000478349 ZC2HC1AQ96GY0 325 aa9.63□□□□□ -0.87
SMARCE1-209ENST00000478349 M0R381 172 aa9.62□□□□□ -0.87
SMARCE1-209ENST00000478349 PFDN1O60925 122 aa9.62□□□□□ -0.87
SMARCE1-209ENST00000478349 SMR3BP02814 79 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-209ENST00000478349 RGS21Q2M5E4 152 aa9.62□□□□□ -0.87
SMARCE1-209ENST00000478349 UFSP1Q6NVU6 142 aa9.62□□□□□ -0.87
SMARCE1-209ENST00000478349 SFRP2Q96HF1 295 aa9.62□□□□□ -0.87
SMARCE1-209ENST00000478349 DMBT1Q9UGM3 2413 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-209ENST00000478349 LTAP01374 205 aa9.61□□□□□ -0.87
SMARCE1-209ENST00000478349 PKIAP61925 76 aa9.61□□□□□ -0.87
SMARCE1-209ENST00000478349 ZNF674Q2M3X9 581 aa9.61□□□□□ -0.87
SMARCE1-209ENST00000478349 C14orf178Q8N769 122 aaPredicted RBP9.61□□□□□ -0.87
SMARCE1-209ENST00000478349 GRIFINA4D1Z8 144 aa9.6□□□□□ -0.87
SMARCE1-209ENST00000478349 UMAD1C9J7I0 102 aa9.6□□□□□ -0.87
SMARCE1-209ENST00000478349 PLA2G1BP04054 148 aaKnown RBP9.6□□□□□ -0.87
SMARCE1-209ENST00000478349 DAZ4Q86SG3 579 aaKnown RBP9.6□□□□□ -0.87
SMARCE1-209ENST00000478349 Q8N976 141 aa9.6□□□□□ -0.87
SMARCE1-209ENST00000478349 SAMD10Q9BYL1 202 aa9.6□□□□□ -0.87
SMARCE1-209ENST00000478349 JPT2Q9H910 190 aa9.6□□□□□ -0.87
SMARCE1-209ENST00000478349 DAZ3Q9NR90 486 aaKnown RBP9.6□□□□□ -0.87
SMARCE1-209ENST00000478349 A0A087WWL8 130 aa9.59□□□□□ -0.87
SMARCE1-209ENST00000478349 TMSB15BA0A087X1C1 80 aa9.59□□□□□ -0.87
SMARCE1-209ENST00000478349 CXCL1P09341 107 aa9.59□□□□□ -0.87
SMARCE1-209ENST00000478349 EIF5AP63241 154 aaKnown RBP9.59□□□□□ -0.87
SMARCE1-209ENST00000478349 Q0VG73 95 aa9.59□□□□□ -0.87
SMARCE1-209ENST00000478349 ZNF345Q14585 488 aa9.59□□□□□ -0.87
SMARCE1-209ENST00000478349 NIT1Q86X76 327 aa9.59□□□□□ -0.87
SMARCE1-209ENST00000478349 TRBV7-3A0A075B6L6 115 aa9.58□□□□□ -0.88
SMARCE1-209ENST00000478349 IGKV2D-24A0A075B6R9 120 aa9.58□□□□□ -0.88
SMARCE1-209ENST00000478349 CRIP1P50238 77 aa9.58□□□□□ -0.88
SMARCE1-209ENST00000478349 C14orf177Q52M58 125 aa9.58□□□□□ -0.88
SMARCE1-209ENST00000478349 RBFOX3A6NFN3 312 aa9.57□□□□□ -0.88
SMARCE1-209ENST00000478349 PAGE4O60829 102 aa9.57□□□□□ -0.88
SMARCE1-209ENST00000478349 CRPP02741 224 aa9.57□□□□□ -0.88
SMARCE1-209ENST00000478349 RAB4BP61018 213 aa9.57□□□□□ -0.88
SMARCE1-209ENST00000478349 ZNF56Q15929 161 aa9.57□□□□□ -0.88
SMARCE1-209ENST00000478349 SFT2D1Q8WV19 159 aa9.57□□□□□ -0.88
SMARCE1-209ENST00000478349 ZNF471Q9BX82 626 aaPredicted RBP9.57□□□□□ -0.88
SMARCE1-209ENST00000478349 KLK12Q9UKR0 248 aa9.57□□□□□ -0.88
SMARCE1-209ENST00000478349 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-209ENST00000478349 KANTRA0A1W2PQU2 76 aa9.56□□□□□ -0.88
SMARCE1-209ENST00000478349 LECT2O14960 151 aa9.56□□□□□ -0.88
SMARCE1-209ENST00000478349 UBE2D3P61077 147 aa9.56□□□□□ -0.88
SMARCE1-209ENST00000478349 UBE2D2P62837 147 aa9.56□□□□□ -0.88
SMARCE1-209ENST00000478349 HAMPP81172 84 aa9.56□□□□□ -0.88
SMARCE1-209ENST00000478349 TMEM97Q5BJF2 176 aa9.56□□□□□ -0.88
SMARCE1-209ENST00000478349 Q8N3U1 123 aa9.56□□□□□ -0.88
SMARCE1-209ENST00000478349 OR10G8Q8NGN5 311 aa9.56□□□□□ -0.88
SMARCE1-209ENST00000478349 FAM213BQ8TBF2 198 aa9.56□□□□□ -0.88
SMARCE1-209ENST00000478349 UBE2WQ96B02 151 aa9.56□□□□□ -0.88
SMARCE1-209ENST00000478349 C1orf43Q9BWL3 253 aa9.56□□□□□ -0.88
SMARCE1-209ENST00000478349 CYTL1Q9NRR1 136 aa9.56□□□□□ -0.88
SMARCE1-209ENST00000478349 A0A0D9SG52 128 aa9.55□□□□□ -0.88
SMARCE1-209ENST00000478349 SMIM17P0DL12 118 aa9.55□□□□□ -0.88
SMARCE1-209ENST00000478349 SPANXN1Q5VSR9 72 aa9.55□□□□□ -0.88
SMARCE1-209ENST00000478349 Q6ZSA8 131 aa9.55□□□□□ -0.88
SMARCE1-209ENST00000478349 BAGE2Q86Y30 109 aa9.55□□□□□ -0.88
SMARCE1-209ENST00000478349 KCNRGQ8N5I3 272 aa9.55□□□□□ -0.88
SMARCE1-209ENST00000478349 BAALCQ8WXS3 180 aa9.55□□□□□ -0.88
SMARCE1-209ENST00000478349 TMEM262E9PQX1 116 aa9.54□□□□□ -0.88
SMARCE1-209ENST00000478349 G3V3Q6 166 aa9.54□□□□□ -0.88
SMARCE1-209ENST00000478349 WFDC2Q14508 124 aa9.54□□□□□ -0.88
SMARCE1-209ENST00000478349 MBD3L1Q8WWY6 194 aa9.54□□□□□ -0.88
SMARCE1-209ENST00000478349 TRBV6-8A0A0A6YYG3 113 aa9.53□□□□□ -0.88
SMARCE1-209ENST00000478349 TEX46H3BTG2 121 aa9.53□□□□□ -0.88
SMARCE1-209ENST00000478349 H2AFB1P0C5Y9 115 aa9.53□□□□□ -0.88
SMARCE1-209ENST00000478349 OR5AL1P0C617 328 aa9.53□□□□□ -0.88
SMARCE1-209ENST00000478349 ATRAIDQ6UW56 229 aa9.53□□□□□ -0.88
SMARCE1-209ENST00000478349 AP1S3Q96PC3 154 aa9.53□□□□□ -0.88
SMARCE1-209ENST00000478349 Q9UF83 564 aa9.53□□□□□ -0.88
SMARCE1-209ENST00000478349 SCO2A0A1W2PP80 73 aa9.52□□□□□ -0.89
SMARCE1-209ENST00000478349 HMSDA8MTL9 139 aa9.52□□□□□ -0.89
SMARCE1-209ENST00000478349 F5H697 171 aa9.52□□□□□ -0.89
SMARCE1-209ENST00000478349 BCL2L11O43521 198 aa9.52□□□□□ -0.89
SMARCE1-209ENST00000478349 PRR27Q6MZM9 219 aa9.52□□□□□ -0.89
SMARCE1-209ENST00000478349 OR10AG1Q8NH19 301 aa9.52□□□□□ -0.89
SMARCE1-209ENST00000478349 CHCHD5Q9BSY4 110 aa9.52□□□□□ -0.89
SMARCE1-209ENST00000478349 MANBALQ9NQG1 85 aa9.52□□□□□ -0.89
SMARCE1-209ENST00000478349 FAM30AQ9NZY2 134 aa9.52□□□□□ -0.89
SMARCE1-209ENST00000478349 A0A1B0GV50 99 aa9.51□□□□□ -0.89
SMARCE1-209ENST00000478349 H7C1H1 209 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms