RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 PMVKQ15126 192 aa7.41□□□□□ -1.22
COL13A1-207ENST00000478219 CLEC2BQ92478 149 aa7.41□□□□□ -1.22
COL13A1-207ENST00000478219 CSDC2Q9Y534 153 aaKnown RBP7.41□□□□□ -1.22
COL13A1-207ENST00000478219 GVINP1Q7Z2Y8 2422 aa7.41□□□□□ -1.22
COL13A1-207ENST00000478219 TRAV17A0A0B4J275 112 aa7.41□□□□□ -1.22
COL13A1-207ENST00000478219 LGALS3P17931 250 aaKnown RBP7.41□□□□□ -1.22
COL13A1-207ENST00000478219 BSPH1Q075Z2 132 aa7.41□□□□□ -1.22
COL13A1-207ENST00000478219 HES1Q14469 280 aa7.41□□□□□ -1.22
COL13A1-207ENST00000478219 NUP37Q8NFH4 326 aa7.41□□□□□ -1.22
COL13A1-207ENST00000478219 DPH3P1Q9H4G8 78 aa7.41□□□□□ -1.22
COL13A1-207ENST00000478219 JPT2Q9H910 190 aa7.41□□□□□ -1.22
COL13A1-207ENST00000478219 KAAG1Q9UBP8 84 aa7.41□□□□□ -1.22
COL13A1-207ENST00000478219 TRGV11A0A075B6L2 103 aa7.4□□□□□ -1.22
COL13A1-207ENST00000478219 A0A0B4J2C4 111 aa7.4□□□□□ -1.22
COL13A1-207ENST00000478219 FAM236AA0A1B0GUQ0 79 aa7.4□□□□□ -1.22
COL13A1-207ENST00000478219 FAM236BA0A1B0GV22 79 aa7.4□□□□□ -1.22
COL13A1-207ENST00000478219 ZFAND3Q9H8U3 227 aa7.4□□□□□ -1.22
COL13A1-207ENST00000478219 SPTBN2O15020 2390 aa7.4□□□□□ -1.22
COL13A1-207ENST00000478219 GNRH2O43555 120 aa7.4□□□□□ -1.23
COL13A1-207ENST00000478219 MRPL23Q16540 153 aaKnown RBP7.4□□□□□ -1.23
COL13A1-207ENST00000478219 ASCL5Q7RTU5 278 aa7.4□□□□□ -1.23
COL13A1-207ENST00000478219 UBE2E1P51965 193 aa7.39□□□□□ -1.23
COL13A1-207ENST00000478219 EBI3Q14213 229 aa7.39□□□□□ -1.23
COL13A1-207ENST00000478219 ZNF876PQ49A33 203 aa7.39□□□□□ -1.23
COL13A1-207ENST00000478219 POM121L12Q8N7R1 296 aa7.39□□□□□ -1.23
COL13A1-207ENST00000478219 NRGNQ92686 78 aa7.39□□□□□ -1.23
COL13A1-207ENST00000478219 C20orf173Q96LM9 149 aa7.39□□□□□ -1.23
COL13A1-207ENST00000478219 LINC01600Q96MT4 127 aa7.39□□□□□ -1.23
COL13A1-207ENST00000478219 PRRC2AP48634 2157 aaKnown RBP7.39□□□□□ -1.23
COL13A1-207ENST00000478219 LINC00315P59091 139 aa7.39□□□□□ -1.23
COL13A1-207ENST00000478219 RNASE6Q93091 150 aaKnown RBP7.39□□□□□ -1.23
COL13A1-207ENST00000478219 RNF5Q99942 180 aa7.39□□□□□ -1.23
COL13A1-207ENST00000478219 TMEM126AQ9H061 195 aa7.39□□□□□ -1.23
COL13A1-207ENST00000478219 PHLDA3Q9Y5J5 127 aa7.39□□□□□ -1.23
COL13A1-207ENST00000478219 S100A4P26447 101 aaKnown RBP7.38□□□□□ -1.23
COL13A1-207ENST00000478219 C9orf47Q6ZRZ4 202 aa7.38□□□□□ -1.23
COL13A1-207ENST00000478219 NPBQ8NG41 125 aa7.38□□□□□ -1.23
COL13A1-207ENST00000478219 TRBV30A0A0K0K1B3 111 aa7.38□□□□□ -1.23
COL13A1-207ENST00000478219 TRBV7-7A0A0K0K1E9 115 aa7.38□□□□□ -1.23
COL13A1-207ENST00000478219 TMEM223A0PJW6 202 aa7.38□□□□□ -1.23
COL13A1-207ENST00000478219 CDX4O14627 284 aaPredicted RBP7.38□□□□□ -1.23
COL13A1-207ENST00000478219 NPC2P61916 151 aa7.38□□□□□ -1.23
COL13A1-207ENST00000478219 ZFAND2AQ8N6M9 145 aa7.38□□□□□ -1.23
COL13A1-207ENST00000478219 SMCR5Q8TEV8 140 aa7.38□□□□□ -1.23
COL13A1-207ENST00000478219 EEF1AKMT3Q96AZ1 226 aa7.38□□□□□ -1.23
COL13A1-207ENST00000478219 C1orf43Q9BWL3 253 aa7.38□□□□□ -1.23
COL13A1-207ENST00000478219 M0R2P5 195 aa7.37□□□□□ -1.23
COL13A1-207ENST00000478219 C15orf32Q32M92 178 aa7.37□□□□□ -1.23
COL13A1-207ENST00000478219 ADAMTSL4-AS1Q5T5F5 129 aa7.37□□□□□ -1.23
COL13A1-207ENST00000478219 CELSR1Q9NYQ6 3014 aa7.37□□□□□ -1.23
COL13A1-207ENST00000478219 CD3EP07766 207 aa7.37□□□□□ -1.23
COL13A1-207ENST00000478219 RNASE3P12724 160 aaKnown RBP7.37□□□□□ -1.23
COL13A1-207ENST00000478219 PAPPA-AS1Q5QFB9 102 aa7.37□□□□□ -1.23
COL13A1-207ENST00000478219 AKAP13Q12802 2813 aa7.36□□□□□ -1.23
COL13A1-207ENST00000478219 SPTBN1Q01082 2364 aaKnown RBP7.36□□□□□ -1.23
COL13A1-207ENST00000478219 POLR2KP53803 58 aaKnown RBP7.36□□□□□ -1.23
COL13A1-207ENST00000478219 LITAFQ99732 161 aa7.36□□□□□ -1.23
COL13A1-207ENST00000478219 ICOSQ9Y6W8 199 aa7.36□□□□□ -1.23
COL13A1-207ENST00000478219 KIF25-AS1Q9Y6Z4 181 aa7.36□□□□□ -1.23
COL13A1-207ENST00000478219 A0A087WWL8 130 aa7.36□□□□□ -1.23
COL13A1-207ENST00000478219 IGHV1-69DA0A0B4J2H0 117 aa7.36□□□□□ -1.23
COL13A1-207ENST00000478219 A0A0J9YXY3 114 aa7.36□□□□□ -1.23
COL13A1-207ENST00000478219 CLEC19AQ6UXS0 136 aa7.36□□□□□ -1.23
COL13A1-207ENST00000478219 DNAJC30Q96LL9 226 aa7.36□□□□□ -1.23
COL13A1-207ENST00000478219 METTL26Q96S19 204 aa7.36□□□□□ -1.23
COL13A1-207ENST00000478219 DYNLRB1Q9NP97 96 aa7.36□□□□□ -1.23
COL13A1-207ENST00000478219 LEPROTO15243 131 aa7.35□□□□□ -1.23
COL13A1-207ENST00000478219 NDUFA7O95182 113 aa7.35□□□□□ -1.23
COL13A1-207ENST00000478219 PRSS2P07478 247 aa7.35□□□□□ -1.23
COL13A1-207ENST00000478219 HERVK_113P63121 156 aa7.35□□□□□ -1.23
COL13A1-207ENST00000478219 C9orf153Q5TBE3 101 aa7.35□□□□□ -1.23
COL13A1-207ENST00000478219 DPM3Q9P2X0 92 aa7.35□□□□□ -1.23
COL13A1-207ENST00000478219 A0A0J9YXV3 536 aa7.35□□□□□ -1.23
COL13A1-207ENST00000478219 F6UB75 175 aa7.35□□□□□ -1.23
COL13A1-207ENST00000478219 SUMO4Q6EEV6 95 aa7.35□□□□□ -1.23
COL13A1-207ENST00000478219 CCDC140Q96MF4 163 aa7.35□□□□□ -1.23
COL13A1-207ENST00000478219 IGHV7-81A0A0B4J1V7 117 aa7.34□□□□□ -1.23
COL13A1-207ENST00000478219 A0A0G2JNJ9 132 aa7.34□□□□□ -1.23
COL13A1-207ENST00000478219 SDHAF1A6NFY7 115 aa7.34□□□□□ -1.23
COL13A1-207ENST00000478219 A8MZ25 164 aa7.34□□□□□ -1.23
COL13A1-207ENST00000478219 NPFFO15130 113 aa7.34□□□□□ -1.23
COL13A1-207ENST00000478219 RNASE4P34096 147 aaKnown RBP7.34□□□□□ -1.23
COL13A1-207ENST00000478219 DEFB121Q5J5C9 76 aa7.34□□□□□ -1.23
COL13A1-207ENST00000478219 FAM19A5Q7Z5A7 132 aaPredicted RBP7.34□□□□□ -1.23
COL13A1-207ENST00000478219 TIMM17AQ99595 171 aa7.34□□□□□ -1.23
COL13A1-207ENST00000478219 CYSTM1Q9H1C7 97 aa7.34□□□□□ -1.23
COL13A1-207ENST00000478219 Q9UFV3 132 aa7.34□□□□□ -1.23
COL13A1-207ENST00000478219 LINC00527Q9UJ94 153 aa7.34□□□□□ -1.23
COL13A1-207ENST00000478219 ZNF256Q9Y2P7 627 aaPredicted RBP7.34□□□□□ -1.23
COL13A1-207ENST00000478219 TRAV8-3A0A0A6YYJ7 113 aa7.34□□□□□ -1.23
COL13A1-207ENST00000478219 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.34□□□□□ -1.23
COL13A1-207ENST00000478219 ECSCRQ19T08 205 aa7.34□□□□□ -1.23
COL13A1-207ENST00000478219 VMO1Q7Z5L0 202 aa7.34□□□□□ -1.23
COL13A1-207ENST00000478219 TMEM141Q96I45 108 aa7.34□□□□□ -1.23
COL13A1-207ENST00000478219 C16orf92Q96LL3 132 aa7.34□□□□□ -1.23
COL13A1-207ENST00000478219 SPANXA1Q9NS26 97 aa7.34□□□□□ -1.23
COL13A1-207ENST00000478219 FAM240AA0A1B0GVK7 77 aa7.33□□□□□ -1.24
COL13A1-207ENST00000478219 E7EQL1 145 aa7.33□□□□□ -1.24
COL13A1-207ENST00000478219 LY6HO94772 140 aa7.33□□□□□ -1.24
COL13A1-207ENST00000478219 C3orf22Q8N5N4 141 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms