RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 RASD2Q96D21 266 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 VPS25Q9BRG1 176 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 MAP1LC3BQ9GZQ8 125 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 GEMIN7Q9H840 131 aaKnown RBP-1.36□□□□□ -2.63
CALD1-218ENST00000478075 PRTFDC1Q9NRG1 225 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 ERG28Q9UKR5 140 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 KIAA1107Q9UPP5 1409 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 MPC1Q9Y5U8 109 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 TMEM56-RWDD3S4R434 201 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 NUP155O75694 1391 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 KIAA0232Q92628 1395 aa-1.36□□□□□ -2.63
CALD1-218ENST00000478075 NUP210LQ5VU65 1888 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.37□□□□□ -2.63
CALD1-218ENST00000478075 ADGRL3Q9HAR2 1447 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 TMEM238C9JI98 176 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 WBP4O75554 376 aaKnown RBP-1.37□□□□□ -2.63
CALD1-218ENST00000478075 IFNA1P01562 189 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 IFNA5P01569 189 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 HLA-DRAP01903 254 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 HLA-DRB1P01911 266 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 MT-ND6P03923 174 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 IFNA4P05014 189 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 CRHP06850 196 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 MGPP08493 103 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 GAP43P17677 238 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 CDKN2CP42773 168 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 INSL3P51460 131 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 AP3S2P59780 193 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 ULK3Q6PHR2 472 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 EIF3MQ7L2H7 374 aaKnown RBP-1.37□□□□□ -2.63
CALD1-218ENST00000478075 CENPQQ7L2Z9 268 aaPredicted RBP-1.37□□□□□ -2.63
CALD1-218ENST00000478075 MRPL52Q86TS9 123 aaKnown RBP-1.37□□□□□ -2.63
CALD1-218ENST00000478075 SLC51BQ86UW2 128 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 FAM228AQ86W67 206 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 NDUFA11Q86Y39 141 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 STX12Q86Y82 276 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 BLIDQ8IZY5 108 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 KRT222Q8N1A0 295 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 ANKRD29Q8N6D5 301 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 STOML3Q8TAV4 291 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 PPDPFLQ8WWR9 84 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 IFT81Q8WYA0 676 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 PHB2Q99623 299 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 SMIM7Q9BQ49 75 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 SPANXB1Q9NS25 103 aaPredicted RBP-1.37□□□□□ -2.63
CALD1-218ENST00000478075 RMND1Q9NWS8 449 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 GCNT4Q9P109 453 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 MOSPD1Q9UJG1 213 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 STOML2Q9UJZ1 356 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 ZNF831Q5JPB2 1677 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 PBRM1Q86U86 1689 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 DCHS1Q96JQ0 3298 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 A0A0G2JMZ2 1700 aa-1.37□□□□□ -2.63
CALD1-218ENST00000478075 MUC22E2RYF6 1773 aaPredicted RBP-1.38□□□□□ -2.63
CALD1-218ENST00000478075 CUX1P39880 1505 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 C5orf58C9J3I9 102 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 J3QRK9 145 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 TAX1BP3O14907 124 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 BIRC5O15392 142 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 CST8O60676 142 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 HIST1H2BKO60814 126 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 GGCTO75223 188 aaKnown RBP-1.38□□□□□ -2.63
CALD1-218ENST00000478075 SPAG6O75602 509 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 OTCP00480 354 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 HIST1H2BJP06899 126 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 CST2P09228 141 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 PIRTP0C851 137 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 SMIM17P0DL12 118 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 SLC25A6P12236 298 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 OMPP47874 163 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 TMBIM6P55061 237 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 SNRPD2P62316 118 aaKnown RBP-1.38□□□□□ -2.63
CALD1-218ENST00000478075 COTL1Q14019 142 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 FLOT2Q14254 428 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 RSU1Q15404 277 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 RRN3P1Q2M238 152 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 HSP90AA4PQ58FG1 418 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 C1orf195Q5TG92 126 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 C10orf113Q5VZT2 155 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 Q6AWC8 147 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 AHSA2Q719I0 299 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 SYCE1Q8N0S2 351 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 OR8I2Q8N0Y5 310 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 RNASEH2CQ8TDP1 164 aaKnown RBP-1.38□□□□□ -2.63
CALD1-218ENST00000478075 C10orf82Q8WW14 230 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 TEX37Q96LM6 180 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 SERPINB11Q96P15 392 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 CCDC77Q9BR77 488 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 C20orf27Q9GZN8 174 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 DRC3Q9H069 523 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 MRPL40Q9NQ50 206 aaKnown RBP-1.38□□□□□ -2.63
CALD1-218ENST00000478075 FKBP11Q9NYL4 201 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 AHSPQ9NZD4 102 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 ENPP5Q9UJA9 477 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 SMARCA2P51531 1590 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 DIP2CQ9Y2E4 1556 aa-1.38□□□□□ -2.63
CALD1-218ENST00000478075 WDFY3Q8IZQ1 3526 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 QRICH2Q9H0J4 1663 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 CCDC171Q6TFL3 1326 aa-1.39□□□□□ -2.63
CALD1-218ENST00000478075 DLC1Q96QB1 1528 aa-1.39□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms