RNA–Protein interactions for RNA: ENST00000477876.1

NUP58-210, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-210ENST00000477876 TMEM136Q6ZRR5 245 aa4□□□□□ -1.77
NUP58-210ENST00000477876 LINC00336Q6ZUF6 198 aa4□□□□□ -1.77
NUP58-210ENST00000477876 STHQ8IWL8 128 aa4□□□□□ -1.77
NUP58-210ENST00000477876 POM121L12Q8N7R1 296 aa4□□□□□ -1.77
NUP58-210ENST00000477876 C5orf17Q8NAS9 161 aa4□□□□□ -1.77
NUP58-210ENST00000477876 OR1B1Q8NGR6 318 aa4□□□□□ -1.77
NUP58-210ENST00000477876 LINC00479Q96M42 142 aa4□□□□□ -1.77
NUP58-210ENST00000477876 PACRGQ96M98 296 aaPredicted RBP4□□□□□ -1.77
NUP58-210ENST00000477876 ATG101Q9BSB4 218 aa4□□□□□ -1.77
NUP58-210ENST00000477876 GNB1LQ9BYB4 327 aa4□□□□□ -1.77
NUP58-210ENST00000477876 SLC25A39Q9BZJ4 359 aaPredicted RBP4□□□□□ -1.77
NUP58-210ENST00000477876 RNASE7Q9H1E1 156 aaKnown RBP4□□□□□ -1.77
NUP58-210ENST00000477876 OTORQ9NRC9 128 aa4□□□□□ -1.77
NUP58-210ENST00000477876 ZNF492Q9P255 531 aa4□□□□□ -1.77
NUP58-210ENST00000477876 HIGD1AQ9Y241 93 aa4□□□□□ -1.77
NUP58-210ENST00000477876 TRAPPC1Q9Y5R8 145 aa4□□□□□ -1.77
NUP58-210ENST00000477876 IGLV2-18A0A075B6J9 118 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 TRBV19A0A075B6N1 114 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 TRAV30A0A087WSZ9 112 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 DEFB131BA0A096LNP1 70 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 A0A1B0GXF2 115 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 PCP4L1A6NKN8 68 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 H3BMM0 161 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 PRM2P04554 102 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 GZMBP10144 247 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 HIST1H1EP10412 219 aaKnown RBP3.99□□□□□ -1.77
NUP58-210ENST00000477876 MIFP14174 115 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 ORM2P19652 201 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 FXYD7P58549 80 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 KRTAP10-5P60370 271 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 GNG5P63218 68 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 Q0VG73 95 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 USF2Q15853 346 aaPredicted RBP3.99□□□□□ -1.77
NUP58-210ENST00000477876 PDZD11Q5EBL8 140 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 IBA57Q5T440 356 aaKnown RBP3.99□□□□□ -1.77
NUP58-210ENST00000477876 RASL11AQ6T310 242 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 SIGLEC15Q6ZMC9 328 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 Q86TA4 180 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 OR8I2Q8N0Y5 310 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 LYPD1Q8N2G4 141 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 ARL6IP6Q8N6S5 226 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 FMC1Q96HJ9 113 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 C17orf77Q96MU5 243 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 GPR82Q96P67 336 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 LITAFQ99732 161 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 Q9H3A6 140 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 ZNF586Q9NXT0 402 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 XCL2Q9UBD3 114 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 DYNC1H1Q14204 4646 aaKnown RBP3.99□□□□□ -1.77
NUP58-210ENST00000477876 NACAE9PAV3 2078 aa3.99□□□□□ -1.77
NUP58-210ENST00000477876 TRAV34A0A0B4J273 112 aa3.98□□□□□ -1.77
NUP58-210ENST00000477876 PGPA6NDG6 321 aa3.98□□□□□ -1.77
NUP58-210ENST00000477876 ZNF705FA8MVS1 300 aaPredicted RBP3.98□□□□□ -1.77
NUP58-210ENST00000477876 NUPR1O60356 82 aa3.98□□□□□ -1.77
NUP58-210ENST00000477876 HLA-DQA1P01909 254 aa3.98□□□□□ -1.77
NUP58-210ENST00000477876 SLC25A5P05141 298 aaKnown RBP3.98□□□□□ -1.77
NUP58-210ENST00000477876 ZNF705DP0CH99 300 aaPredicted RBP3.98□□□□□ -1.77
NUP58-210ENST00000477876 ZNF705BP0CI00 300 aaPredicted RBP3.98□□□□□ -1.77
NUP58-210ENST00000477876 RD3LP0DJH9 198 aa3.98□□□□□ -1.77
NUP58-210ENST00000477876 RAB4BP61018 213 aa3.98□□□□□ -1.77
NUP58-210ENST00000477876 LYZP61626 148 aa3.98□□□□□ -1.77
NUP58-210ENST00000477876 RANP62826 216 aaKnown RBP3.98□□□□□ -1.77
NUP58-210ENST00000477876 LGALS9BQ3B8N2 356 aa3.98□□□□□ -1.77
NUP58-210ENST00000477876 ZNF876PQ49A33 203 aa3.98□□□□□ -1.77
NUP58-210ENST00000477876 C14orf177Q52M58 125 aa3.98□□□□□ -1.77
NUP58-210ENST00000477876 PSMG4Q5JS54 123 aa3.98□□□□□ -1.77
NUP58-210ENST00000477876 MORN3Q6PF18 240 aaPredicted RBP3.98□□□□□ -1.77
NUP58-210ENST00000477876 ZNF705AQ6ZN79 300 aaPredicted RBP3.98□□□□□ -1.77
NUP58-210ENST00000477876 COX8CQ7Z4L0 72 aa3.98□□□□□ -1.77
NUP58-210ENST00000477876 BAGE2Q86Y30 109 aa3.98□□□□□ -1.77
NUP58-210ENST00000477876 TMEM256Q8N2U0 113 aa3.98□□□□□ -1.77
NUP58-210ENST00000477876 TSKUQ8WUA8 353 aa3.98□□□□□ -1.77
NUP58-210ENST00000477876 METTL26Q96S19 204 aa3.98□□□□□ -1.77
NUP58-210ENST00000477876 DNAH11Q96DT5 4516 aa3.98□□□□□ -1.77
NUP58-210ENST00000477876 FAM231BA6NCW3 169 aa3.97□□□□□ -1.77
NUP58-210ENST00000477876 SNURFLB1AK76 121 aa3.97□□□□□ -1.77
NUP58-210ENST00000477876 SMIM1B2RUZ4 78 aa3.97□□□□□ -1.77
NUP58-210ENST00000477876 GATCO43716 136 aaKnown RBP3.97□□□□□ -1.77
NUP58-210ENST00000477876 ZNF253O75346 499 aa3.97□□□□□ -1.77
NUP58-210ENST00000477876 SERF1AO75920 110 aa3.97□□□□□ -1.77
NUP58-210ENST00000477876 MGST1P10620 155 aaKnown RBP3.97□□□□□ -1.77
NUP58-210ENST00000477876 EMP1P54849 157 aa3.97□□□□□ -1.77
NUP58-210ENST00000477876 PDE6HQ13956 83 aa3.97□□□□□ -1.77
NUP58-210ENST00000477876 OR10J3Q5JRS4 329 aa3.97□□□□□ -1.77
NUP58-210ENST00000477876 LCE1FQ5T754 118 aa3.97□□□□□ -1.77
NUP58-210ENST00000477876 ATP5L2Q7Z4Y8 100 aa3.97□□□□□ -1.77
NUP58-210ENST00000477876 BPIFA4PQ86YQ2 179 aa3.97□□□□□ -1.77
NUP58-210ENST00000477876 C1orf158Q8N1D5 194 aa3.97□□□□□ -1.77
NUP58-210ENST00000477876 TMEM75Q8N9X5 138 aa3.97□□□□□ -1.77
NUP58-210ENST00000477876 GATD1Q8NB37 220 aa3.97□□□□□ -1.77
NUP58-210ENST00000477876 NHLRC2Q8NBF2 726 aa3.97□□□□□ -1.77
NUP58-210ENST00000477876 BLNKQ8WV28 456 aa3.97□□□□□ -1.77
NUP58-210ENST00000477876 GFRA4Q9GZZ7 299 aa3.97□□□□□ -1.77
NUP58-210ENST00000477876 RPP21Q9H633 154 aaKnown RBP3.97□□□□□ -1.77
NUP58-210ENST00000477876 RNF24Q9Y225 148 aa3.97□□□□□ -1.77
NUP58-210ENST00000477876 GRIFINA4D1Z8 144 aa3.96□□□□□ -1.78
NUP58-210ENST00000477876 ZNF705GA8MUZ8 300 aaPredicted RBP3.96□□□□□ -1.78
NUP58-210ENST00000477876 F2Z2F3 143 aa3.96□□□□□ -1.78
NUP58-210ENST00000477876 F6UB75 175 aa3.96□□□□□ -1.78
NUP58-210ENST00000477876 H3BTX0 84 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms