RNA–Protein interactions for RNA: ENST00000477523.1

RGPD5-209, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 1 (best)

Gene RGPD5, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-209ENST00000477523 VCYO14598 125 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 IGHV3-53P01767 116 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 DEFB130BP0DP73 79 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 DEFB130AP0DP74 79 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 AZU1P20160 251 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 CITED1Q99966 193 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 RBMY1BA6NDE4 496 aaKnown RBP3.35□□□□□ -1.87
RGPD5-209ENST00000477523 RBMY1EA6NEQ0 496 aaKnown RBP3.35□□□□□ -1.87
RGPD5-209ENST00000477523 LINC01549A6NIU2 74 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 TCAPO15273 167 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 RBMY1DP0C7P1 496 aaKnown RBP3.35□□□□□ -1.87
RGPD5-209ENST00000477523 LAGE3Q14657 143 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 C16orf74Q96GX8 76 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 PAPPA-AS1Q5QFB9 102 aa3.34□□□□□ -1.87
RGPD5-209ENST00000477523 CYSLTR1Q9Y271 337 aa3.34□□□□□ -1.87
RGPD5-209ENST00000477523 GAGE12BA1L429 117 aa3.34□□□□□ -1.87
RGPD5-209ENST00000477523 GAGE7O76087 117 aa3.34□□□□□ -1.87
RGPD5-209ENST00000477523 GAGE12FP0CL80 117 aa3.34□□□□□ -1.87
RGPD5-209ENST00000477523 GAGE12GP0CL81 117 aa3.34□□□□□ -1.87
RGPD5-209ENST00000477523 GAGE12IP0CL82 117 aa3.34□□□□□ -1.87
RGPD5-209ENST00000477523 RPL36AP83881 106 aaKnown RBP3.34□□□□□ -1.87
RGPD5-209ENST00000477523 RPL36ALQ969Q0 106 aaKnown RBP3.34□□□□□ -1.87
RGPD5-209ENST00000477523 C9orf85Q96MD7 179 aa3.34□□□□□ -1.87
RGPD5-209ENST00000477523 CLUHP3Q96NS8 147 aa3.34□□□□□ -1.87
RGPD5-209ENST00000477523 SCGB3A1Q96QR1 104 aa3.34□□□□□ -1.87
RGPD5-209ENST00000477523 PRO1933Q9H354 126 aa3.34□□□□□ -1.87
RGPD5-209ENST00000477523 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.34□□□□□ -1.87
RGPD5-209ENST00000477523 CRXO43186 299 aaPredicted RBP3.34□□□□□ -1.87
RGPD5-209ENST00000477523 BEAN1Q3B7T3 259 aa3.34□□□□□ -1.87
RGPD5-209ENST00000477523 IFI27L1Q96BM0 104 aa3.34□□□□□ -1.87
RGPD5-209ENST00000477523 JPT2Q9H910 190 aa3.34□□□□□ -1.87
RGPD5-209ENST00000477523 GATD1Q8NB37 220 aa3.34□□□□□ -1.88
RGPD5-209ENST00000477523 TMEM263Q8WUH6 116 aaKnown RBP3.34□□□□□ -1.88
RGPD5-209ENST00000477523 SETXQ7Z333 2677 aaKnown RBP3.34□□□□□ -1.88
RGPD5-209ENST00000477523 IFITM10A6NMD0 228 aa3.34□□□□□ -1.88
RGPD5-209ENST00000477523 DNLZQ5SXM8 178 aa3.34□□□□□ -1.88
RGPD5-209ENST00000477523 SUMO4Q6EEV6 95 aa3.34□□□□□ -1.88
RGPD5-209ENST00000477523 ZNF747Q9BV97 191 aa3.34□□□□□ -1.88
RGPD5-209ENST00000477523 NOP10Q9NPE3 64 aaKnown RBP3.34□□□□□ -1.88
RGPD5-209ENST00000477523 IGHV1-24A0A0C4DH33 117 aa3.33□□□□□ -1.88
RGPD5-209ENST00000477523 KRTAP10-3P60369 221 aa3.33□□□□□ -1.88
RGPD5-209ENST00000477523 SMAGPQ0VAQ4 97 aa3.33□□□□□ -1.88
RGPD5-209ENST00000477523 COTL1Q14019 142 aa3.33□□□□□ -1.88
RGPD5-209ENST00000477523 Q6ZWC4 215 aa3.33□□□□□ -1.88
RGPD5-209ENST00000477523 PAM16Q9Y3D7 125 aa3.33□□□□□ -1.88
RGPD5-209ENST00000477523 DEFB135Q30KP9 77 aa3.33□□□□□ -1.88
RGPD5-209ENST00000477523 C2orf66Q6UXQ4 117 aa3.33□□□□□ -1.88
RGPD5-209ENST00000477523 SCRT2Q9NQ03 307 aa3.33□□□□□ -1.88
RGPD5-209ENST00000477523 DEFA6Q01524 100 aa3.33□□□□□ -1.88
RGPD5-209ENST00000477523 NEGR1Q7Z3B1 354 aa3.33□□□□□ -1.88
RGPD5-209ENST00000477523 RNF185Q96GF1 192 aa3.33□□□□□ -1.88
RGPD5-209ENST00000477523 NXPH4O95158 308 aa3.33□□□□□ -1.88
RGPD5-209ENST00000477523 AMMECR1LQ6DCA0 310 aa3.33□□□□□ -1.88
RGPD5-209ENST00000477523 ATOH7Q8N100 152 aa3.33□□□□□ -1.88
RGPD5-209ENST00000477523 RPL39LQ96EH5 51 aaKnown RBP3.33□□□□□ -1.88
RGPD5-209ENST00000477523 PMCHL2Q9BQD1 86 aa3.33□□□□□ -1.88
RGPD5-209ENST00000477523 A8MTW9 85 aa3.33□□□□□ -1.88
RGPD5-209ENST00000477523 SYS1-DBNDD2H3BUS1 97 aa3.33□□□□□ -1.88
RGPD5-209ENST00000477523 RIPPLY3P57055 190 aa3.33□□□□□ -1.88
RGPD5-209ENST00000477523 C1orf158Q8N1D5 194 aa3.33□□□□□ -1.88
RGPD5-209ENST00000477523 WFDC9Q8NEX5 89 aa3.33□□□□□ -1.88
RGPD5-209ENST00000477523 SORL1Q92673 2214 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 HTN3P15516 51 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 PKIAP61925 76 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 Q6ZTI0 123 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 PRADC1Q9BSG0 188 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 U3KQK5 164 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 K7EMI3 77 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 OXLD1Q5BKU9 147 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 NDUFAF3Q9BU61 184 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 CR1P17927 2039 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 KIR2DL5BA0A0G2JN68 375 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 KIR2DL5BA0A0G2JPC4 375 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 I3L3M4 83 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 KIR2DL5AQ8N109 375 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 KIR2DL5BQ8NHK3 375 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 COL6A5A8TX70 2615 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 SMIM9A6NGZ8 99 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 LINC00310P59036 64 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 DEFB121Q5J5C9 76 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 PIK3CD-AS1Q5SR53 167 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 DEFB104AQ8WTQ1 72 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 GAGE12JA6NER3 117 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 DAD1P61803 113 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 GAGE1Q13065 139 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 GAGE4Q13068 117 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 GAGE5Q13069 117 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 LGALS9BQ3B8N2 356 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 GAGE13Q4V321 117 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 SPATA45Q537H7 98 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 ZNRF2Q8NHG8 242 aa3.32□□□□□ -1.88
RGPD5-209ENST00000477523 TRAV9-2A0A087WT02 112 aa3.31□□□□□ -1.88
RGPD5-209ENST00000477523 CRYGDP07320 174 aa3.31□□□□□ -1.88
RGPD5-209ENST00000477523 LINC00467Q9BRT7 94 aa3.31□□□□□ -1.88
RGPD5-209ENST00000477523 TP53TG1Q9Y2A0 90 aa3.31□□□□□ -1.88
RGPD5-209ENST00000477523 PRM2P04554 102 aa3.31□□□□□ -1.88
RGPD5-209ENST00000477523 RBMY1A1P0DJD3 496 aaKnown RBP3.31□□□□□ -1.88
RGPD5-209ENST00000477523 RBMY1CP0DJD4 496 aa3.31□□□□□ -1.88
RGPD5-209ENST00000477523 RBMY1FQ15415 496 aaKnown RBP3.31□□□□□ -1.88
RGPD5-209ENST00000477523 OR11H2Q8NH07 326 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms