RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 NDUFA3O95167 84 aa3.59□□□□□ -1.83
PTCD3-212ENST00000477520 PATE4P0C8F1 98 aa3.59□□□□□ -1.83
PTCD3-212ENST00000477520 MAGEA5P43359 124 aa3.59□□□□□ -1.83
PTCD3-212ENST00000477520 B3GALT5-AS1P59052 145 aa3.59□□□□□ -1.83
PTCD3-212ENST00000477520 VMA21Q3ZAQ7 101 aa3.59□□□□□ -1.83
PTCD3-212ENST00000477520 TMEM263Q8WUH6 116 aaKnown RBP3.59□□□□□ -1.83
PTCD3-212ENST00000477520 FLYWCH2Q96CP2 140 aaKnown RBP3.59□□□□□ -1.83
PTCD3-212ENST00000477520 TTTY13Q9BZ97 58 aa3.59□□□□□ -1.83
PTCD3-212ENST00000477520 TTTY12Q9BZ98 90 aa3.59□□□□□ -1.83
PTCD3-212ENST00000477520 AGPAT4-IT1Q9H0P7 198 aa3.59□□□□□ -1.83
PTCD3-212ENST00000477520 V9GYY9 64 aa3.59□□□□□ -1.83
PTCD3-212ENST00000477520 BOD1L1Q8NFC6 3051 aa3.59□□□□□ -1.84
PTCD3-212ENST00000477520 HIVEP3Q5T1R4 2406 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 TRAV12-2A0A075B6T6 113 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 TMSB15BA0A087X1C1 80 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 LOC107984640A0A0U1RRK4 108 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 TINCRA0A1B0GVN0 87 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 PINLYPA6NC86 204 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 MRPS12O15235 138 aaKnown RBP3.58□□□□□ -1.84
PTCD3-212ENST00000477520 CXCL13O43927 109 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 RFPL3SP0C7P2 107 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 LGALS3P17931 250 aaKnown RBP3.58□□□□□ -1.84
PTCD3-212ENST00000477520 CRIP1P50238 77 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 DLX1P56177 255 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 SEC61GP60059 68 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 RPL18AQ02543 176 aaKnown RBP3.58□□□□□ -1.84
PTCD3-212ENST00000477520 ZNF415Q09FC8 603 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 ERCC8Q13216 396 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 FAM222AQ5U5X8 452 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 GFRALQ6UXV0 394 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 WDR86Q86TI4 376 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 MDP1Q86V88 176 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 VKORC1L1Q8N0U8 176 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 C2orf48Q96LS8 159 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 OVOL2Q9BRP0 275 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 SHANK2-AS3Q9BTD1 123 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 SMIM2Q9BVW6 85 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 DEFB127Q9H1M4 99 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 JPT2Q9H910 190 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 FAM30AQ9NZY2 134 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 LINC00527Q9UJ94 153 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 MYO18BQ8IUG5 2567 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 NBEAQ8NFP9 2946 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 KIAA1549Q9HCM3 1950 aa3.58□□□□□ -1.84
PTCD3-212ENST00000477520 INTS1Q8N201 2190 aaKnown RBP3.58□□□□□ -1.84
PTCD3-212ENST00000477520 KALRNO60229 2985 aa3.57□□□□□ -1.84
PTCD3-212ENST00000477520 IGHV3-43A0A0B4J1X8 118 aa3.57□□□□□ -1.84
PTCD3-212ENST00000477520 A0A0J9YXY3 114 aa3.57□□□□□ -1.84
PTCD3-212ENST00000477520 TEX49A0A1B0GTD5 131 aa3.57□□□□□ -1.84
PTCD3-212ENST00000477520 DEFB108AA8MXU0 73 aa3.57□□□□□ -1.84
PTCD3-212ENST00000477520 H3BRN7 92 aa3.57□□□□□ -1.84
PTCD3-212ENST00000477520 H7C423 109 aa3.57□□□□□ -1.84
PTCD3-212ENST00000477520 LEPROTO15243 131 aa3.57□□□□□ -1.84
PTCD3-212ENST00000477520 GRPP07492 148 aa3.57□□□□□ -1.84
PTCD3-212ENST00000477520 SAA1P0DJI8 122 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-212ENST00000477520 SAA2P0DJI9 122 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-212ENST00000477520 IGHV3-43DP0DP04 118 aa3.57□□□□□ -1.84
PTCD3-212ENST00000477520 ZNF134P52741 427 aa3.57□□□□□ -1.84
PTCD3-212ENST00000477520 EFNA4P52798 201 aa3.57□□□□□ -1.84
PTCD3-212ENST00000477520 ATP5EP56381 51 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-212ENST00000477520 SPTAN1Q13813 2472 aaKnown RBP3.57□□□□□ -1.84
PTCD3-212ENST00000477520 Q1RN00 199 aa3.57□□□□□ -1.84
PTCD3-212ENST00000477520 RPL39P5Q59GN2 51 aa3.57□□□□□ -1.84
PTCD3-212ENST00000477520 S100A7L2Q5SY68 101 aa3.57□□□□□ -1.84
PTCD3-212ENST00000477520 DUX4L9Q6RFH8 374 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-212ENST00000477520 ZNF833PQ6ZTB9 187 aa3.57□□□□□ -1.84
PTCD3-212ENST00000477520 FAM216BQ8N7L0 139 aa3.57□□□□□ -1.84
PTCD3-212ENST00000477520 TIMM17AQ99595 171 aa3.57□□□□□ -1.84
PTCD3-212ENST00000477520 VKORC1Q9BQB6 163 aa3.57□□□□□ -1.84
PTCD3-212ENST00000477520 SERP1Q9Y6X1 66 aa3.57□□□□□ -1.84
PTCD3-212ENST00000477520 WDFY3Q8IZQ1 3526 aa3.57□□□□□ -1.84
PTCD3-212ENST00000477520 KMT2BQ9UMN6 2715 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-212ENST00000477520 ZNF462Q96JM2 2506 aa3.56□□□□□ -1.84
PTCD3-212ENST00000477520 DOCK7Q96N67 2140 aa3.56□□□□□ -1.84
PTCD3-212ENST00000477520 SMIM26A0A096LP01 95 aa3.56□□□□□ -1.84
PTCD3-212ENST00000477520 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-212ENST00000477520 EPM2AB3EWF7 344 aa3.56□□□□□ -1.84
PTCD3-212ENST00000477520 SRRM5B3KS81 715 aa3.56□□□□□ -1.84
PTCD3-212ENST00000477520 J3QLI3 93 aa3.56□□□□□ -1.84
PTCD3-212ENST00000477520 J3QQQ9 107 aa3.56□□□□□ -1.84
PTCD3-212ENST00000477520 LST1O00453 97 aa3.56□□□□□ -1.84
PTCD3-212ENST00000477520 TIMM17BO60830 172 aa3.56□□□□□ -1.84
PTCD3-212ENST00000477520 IGHV3-13P01766 116 aa3.56□□□□□ -1.84
PTCD3-212ENST00000477520 NPC2P61916 151 aa3.56□□□□□ -1.84
PTCD3-212ENST00000477520 ATP5EP2Q5VTU8 51 aa3.56□□□□□ -1.84
PTCD3-212ENST00000477520 Q5XG85 94 aa3.56□□□□□ -1.84
PTCD3-212ENST00000477520 LINC00311Q8N616 119 aa3.56□□□□□ -1.84
PTCD3-212ENST00000477520 NRACQ8N912 160 aa3.56□□□□□ -1.84
PTCD3-212ENST00000477520 MRPL53Q96EL3 112 aaKnown RBP3.56□□□□□ -1.84
PTCD3-212ENST00000477520 VSIG2Q96IQ7 327 aa3.56□□□□□ -1.84
PTCD3-212ENST00000477520 C9orf85Q96MD7 179 aa3.56□□□□□ -1.84
PTCD3-212ENST00000477520 RNF5Q99942 180 aa3.56□□□□□ -1.84
PTCD3-212ENST00000477520 RPUSD1Q9UJJ7 312 aaKnown RBP3.56□□□□□ -1.84
PTCD3-212ENST00000477520 LENEPQ9Y5L5 61 aa3.56□□□□□ -1.84
PTCD3-212ENST00000477520 CFAP46Q8IYW2 2715 aa3.56□□□□□ -1.84
PTCD3-212ENST00000477520 ASPMQ8IZT6 3477 aa3.55□□□□□ -1.84
PTCD3-212ENST00000477520 TMEM223A0PJW6 202 aa3.55□□□□□ -1.84
PTCD3-212ENST00000477520 MBD3L4A6NDZ8 208 aaPredicted RBP3.55□□□□□ -1.84
PTCD3-212ENST00000477520 MBD3L3A6NE82 208 aaPredicted RBP3.55□□□□□ -1.84
PTCD3-212ENST00000477520 MBD3L5A6NJ08 208 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 343.4 ms