RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 BVES-AS1Q5T3Y7 98 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 LYPD5Q6UWN5 251 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 ZCCHC23Q6ZST2 131 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 SLC25A26Q70HW3 274 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 ARPINQ7Z6K5 226 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 DYNLRB2Q8TF09 96 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 PPDPFLQ8WWR9 84 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 S100A16Q96FQ6 103 aaKnown RBP0.81□□□□□ -2.28
TARDBP-208ENST00000477447 LINC01600Q96MT4 127 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 PMCHL2Q9BQD1 86 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 C14orf132Q9NPU4 83 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 RABAC1Q9UI14 185 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 COL6A6A6NMZ7 2263 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 HELZ2Q9BYK8 2649 aaKnown RBP0.81□□□□□ -2.28
TARDBP-208ENST00000477447 MARF1Q9Y4F3 1742 aaKnown RBP0.81□□□□□ -2.28
TARDBP-208ENST00000477447 DAPK1P53355 1430 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 EEA1Q15075 1411 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 RBBP6Q7Z6E9 1792 aaKnown RBP0.8□□□□□ -2.28
TARDBP-208ENST00000477447 GOLGA3Q08378 1498 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 NLRP1Q9C000 1473 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 EPRSP07814 1512 aaKnown RBP0.8□□□□□ -2.28
TARDBP-208ENST00000477447 LMTK2Q8IWU2 1503 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.8□□□□□ -2.28
TARDBP-208ENST00000477447 DIP2BQ9P265 1576 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 PCDH15Q96QU1 1955 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 CC2D2AQ9P2K1 1620 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 TRAV2A0A0B4J234 112 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 TRAV17A0A0B4J275 112 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 A0A1W2PPM0 123 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 H3BRM9 83 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 SYS1-DBNDD2H3BUS1 97 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 H7BZZ5 65 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 CCL16O15467 120 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 ASAH2BP0C7U1 165 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 BAALC-AS2P0C853 105 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 MGST1P10620 155 aaKnown RBP0.8□□□□□ -2.28
TARDBP-208ENST00000477447 PIPP12273 146 aaPredicted RBP0.8□□□□□ -2.28
TARDBP-208ENST00000477447 ADCYAP1P18509 176 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 SEC11AP67812 179 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 WFDC2Q14508 124 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 DEFB113Q30KQ7 82 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 ETDBQ3ZM63 59 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 SPANXN1Q5VSR9 72 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.8□□□□□ -2.28
TARDBP-208ENST00000477447 HEPN1Q6WQI6 88 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 SERP2Q8N6R1 65 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 OR10AG1Q8NH19 301 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 FAM213BQ8TBF2 198 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 ZNF431Q8TF32 576 aaPredicted RBP0.8□□□□□ -2.28
TARDBP-208ENST00000477447 MUCL1Q96DR8 90 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 TMEM141Q96I45 108 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 ODF3Q96PU9 254 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 SMIM7Q9BQ49 75 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 ST20Q9HBF5 79 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 CACFD1Q9UGQ2 172 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 SPCS1Q9Y6A9 102 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 DIDO1Q9BTC0 2240 aaKnown RBP0.8□□□□□ -2.28
TARDBP-208ENST00000477447 HFM1A2PYH4 1435 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 NAV1Q8NEY1 1877 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 ZNF106Q9H2Y7 1883 aaKnown RBP0.8□□□□□ -2.28
TARDBP-208ENST00000477447 SHANK2Q9UPX8 1470 aa0.8□□□□□ -2.28
TARDBP-208ENST00000477447 ARHGEF12Q9NZN5 1544 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 LAMC3Q9Y6N6 1575 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 MYOFQ9NZM1 2061 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 TRBV7-1A0A0A6YYK4 115 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 TRAV12-1A0A0B4J245 112 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 LOC107984156A0A0G2JMH3 177 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 CXorf51AA0A1B0GTR3 108 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 TCRBV4S1A1TA0A5B7 111 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 UBE2D3P61077 147 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 UBE2G1P62253 170 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 UBE2D2P62837 147 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 MIR22HGQ0VDD5 57 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 PDE6HQ13956 83 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 ADIRFQ15847 76 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 C9orf116Q5BN46 136 aaPredicted RBP0.79□□□□□ -2.28
TARDBP-208ENST00000477447 NMSQ5H8A3 153 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 SPANXN5Q5MJ07 72 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 S100A7L2Q5SY68 101 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 SLC48A1Q6P1K1 146 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 CASC2Q6XLA1 102 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 ZNF833PQ6ZTB9 187 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 ARL17AQ8IVW1 177 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 Q8TAT8 98 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 S100ZQ8WXG8 99 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 TRGV9Q99603 122 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 CDC42SE1Q9NRR8 79 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 HIGD1BQ9P298 99 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 LHFPL6Q9Y693 200 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 MYH3P11055 1940 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 DENND4CQ5VZ89 1909 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 BLMP54132 1417 aaPredicted RBP0.79□□□□□ -2.28
TARDBP-208ENST00000477447 ANKARQ7Z5J8 1434 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 MLH3Q9UHC1 1453 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 ABCC2Q92887 1545 aa0.79□□□□□ -2.28
TARDBP-208ENST00000477447 ROBO1Q9Y6N7 1651 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 SBF1O95248 1867 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 FER1L6Q2WGJ9 1857 aa0.78□□□□□ -2.28
TARDBP-208ENST00000477447 NUP210Q8TEM1 1887 aaPredicted RBP0.78□□□□□ -2.28
TARDBP-208ENST00000477447 ATG2AQ2TAZ0 1938 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms