RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 PRSS29PA6NIE9 313 aa8.42□□□□□ -1.06
COL27A1-204ENST00000477421 F8VRH5 84 aa8.42□□□□□ -1.06
COL27A1-204ENST00000477421 CTRLP40313 264 aa8.42□□□□□ -1.06
COL27A1-204ENST00000477421 PGPEP1Q9NXJ5 209 aa8.42□□□□□ -1.06
COL27A1-204ENST00000477421 TRGV4A0A0C4DH28 118 aa8.42□□□□□ -1.06
COL27A1-204ENST00000477421 RBAKDNA6NC62 111 aa8.42□□□□□ -1.06
COL27A1-204ENST00000477421 ADARB2-AS1A8MUL3 147 aa8.42□□□□□ -1.06
COL27A1-204ENST00000477421 CIRBPQ14011 172 aaKnown RBP8.42□□□□□ -1.06
COL27A1-204ENST00000477421 MRGPRG-AS1Q2M3A8 158 aa8.41□□□□□ -1.06
COL27A1-204ENST00000477421 ZFAND3Q9H8U3 227 aa8.41□□□□□ -1.06
COL27A1-204ENST00000477421 IGHV4OR15-8A0A075B7B6 117 aa8.41□□□□□ -1.06
COL27A1-204ENST00000477421 A0A087WW49 117 aa8.41□□□□□ -1.06
COL27A1-204ENST00000477421 RPL39P62891 51 aaKnown RBP8.41□□□□□ -1.06
COL27A1-204ENST00000477421 TEX29Q8N6K0 151 aa8.41□□□□□ -1.06
COL27A1-204ENST00000477421 SHISA2Q6UWI4 295 aa8.41□□□□□ -1.06
COL27A1-204ENST00000477421 K7EP13 123 aa8.4□□□□□ -1.06
COL27A1-204ENST00000477421 ZNF415Q09FC8 603 aa8.4□□□□□ -1.06
COL27A1-204ENST00000477421 EBI3Q14213 229 aa8.4□□□□□ -1.06
COL27A1-204ENST00000477421 ZNF48Q96MX3 618 aaPredicted RBP8.4□□□□□ -1.06
COL27A1-204ENST00000477421 TACC2O95359 2948 aa8.4□□□□□ -1.06
COL27A1-204ENST00000477421 LINC01619G3V211 115 aa8.4□□□□□ -1.06
COL27A1-204ENST00000477421 DEFB130BP0DP73 79 aa8.4□□□□□ -1.06
COL27A1-204ENST00000477421 DEFB130AP0DP74 79 aa8.4□□□□□ -1.06
COL27A1-204ENST00000477421 C9orf47Q6ZRZ4 202 aa8.4□□□□□ -1.06
COL27A1-204ENST00000477421 SPATA12Q7Z6I5 190 aa8.4□□□□□ -1.06
COL27A1-204ENST00000477421 C20orf173Q96LM9 149 aa8.4□□□□□ -1.06
COL27A1-204ENST00000477421 CST9LQ9H4G1 147 aa8.4□□□□□ -1.06
COL27A1-204ENST00000477421 SCRT2Q9NQ03 307 aa8.4□□□□□ -1.06
COL27A1-204ENST00000477421 TRBV25-1A0A075B6N4 114 aa8.4□□□□□ -1.07
COL27A1-204ENST00000477421 HIST2H2BCQ6DN03 193 aa8.4□□□□□ -1.07
COL27A1-204ENST00000477421 MDFICQ9P1T7 246 aa8.4□□□□□ -1.07
COL27A1-204ENST00000477421 Q8N1Y9 231 aa8.39□□□□□ -1.07
COL27A1-204ENST00000477421 CHCHD5Q9BSY4 110 aa8.39□□□□□ -1.07
COL27A1-204ENST00000477421 PRORYQ9H606 182 aa8.39□□□□□ -1.07
COL27A1-204ENST00000477421 Q8N6K4 173 aa8.39□□□□□ -1.07
COL27A1-204ENST00000477421 OR13C6PQ8NH95 151 aa8.39□□□□□ -1.07
COL27A1-204ENST00000477421 C11orf21Q9P2W6 132 aa8.39□□□□□ -1.07
COL27A1-204ENST00000477421 PTPRBP23467 1997 aa8.39□□□□□ -1.07
COL27A1-204ENST00000477421 TNRC6BQ9UPQ9 1833 aaKnown RBP8.39□□□□□ -1.07
COL27A1-204ENST00000477421 DEFB125Q8N687 156 aa8.39□□□□□ -1.07
COL27A1-204ENST00000477421 AGRNO00468 2067 aa8.39□□□□□ -1.07
COL27A1-204ENST00000477421 A0A087WX48 190 aa8.38□□□□□ -1.07
COL27A1-204ENST00000477421 ELANEP08246 267 aa8.38□□□□□ -1.07
COL27A1-204ENST00000477421 PMVKQ15126 192 aa8.38□□□□□ -1.07
COL27A1-204ENST00000477421 GAGE13Q4V321 117 aa8.38□□□□□ -1.07
COL27A1-204ENST00000477421 MRPL53Q96EL3 112 aaKnown RBP8.38□□□□□ -1.07
COL27A1-204ENST00000477421 A6NDX4 124 aa8.38□□□□□ -1.07
COL27A1-204ENST00000477421 FSTL3O95633 263 aa8.38□□□□□ -1.07
COL27A1-204ENST00000477421 AVPP01185 164 aa8.38□□□□□ -1.07
COL27A1-204ENST00000477421 INSP01308 110 aa8.38□□□□□ -1.07
COL27A1-204ENST00000477421 IGLC6P0CF74 106 aa8.38□□□□□ -1.07
COL27A1-204ENST00000477421 HLA-DRB4P13762 266 aa8.38□□□□□ -1.07
COL27A1-204ENST00000477421 ETDBQ3ZM63 59 aa8.38□□□□□ -1.07
COL27A1-204ENST00000477421 TRPT1Q86TN4 253 aaKnown RBP8.38□□□□□ -1.07
COL27A1-204ENST00000477421 TMEM101Q96IK0 257 aa8.38□□□□□ -1.07
COL27A1-204ENST00000477421 LENEPQ9Y5L5 61 aa8.38□□□□□ -1.07
COL27A1-204ENST00000477421 HLA-DRB4X5D2U9 266 aa8.38□□□□□ -1.07
COL27A1-204ENST00000477421 LINC01549A6NIU2 74 aa8.38□□□□□ -1.07
COL27A1-204ENST00000477421 OR5A1Q8NGJ0 315 aa8.38□□□□□ -1.07
COL27A1-204ENST00000477421 C11orf68Q9H3H3 251 aaKnown RBP8.38□□□□□ -1.07
COL27A1-204ENST00000477421 GAGE12JA6NER3 117 aa8.37□□□□□ -1.07
COL27A1-204ENST00000477421 C9orf118A6NHY6 69 aa8.37□□□□□ -1.07
COL27A1-204ENST00000477421 GAGE1Q13065 139 aa8.37□□□□□ -1.07
COL27A1-204ENST00000477421 GAGE4Q13068 117 aa8.37□□□□□ -1.07
COL27A1-204ENST00000477421 GAGE5Q13069 117 aa8.37□□□□□ -1.07
COL27A1-204ENST00000477421 ZNF493Q6ZR52 646 aa8.37□□□□□ -1.07
COL27A1-204ENST00000477421 URB1-AS1Q96HZ7 61 aa8.37□□□□□ -1.07
COL27A1-204ENST00000477421 COL12A1Q99715 3063 aa8.37□□□□□ -1.07
COL27A1-204ENST00000477421 F8W735 103 aaPredicted RBP8.37□□□□□ -1.07
COL27A1-204ENST00000477421 H3BMG7 143 aa8.37□□□□□ -1.07
COL27A1-204ENST00000477421 H3BUA1 57 aa8.37□□□□□ -1.07
COL27A1-204ENST00000477421 RNASE1P07998 156 aaKnown RBP8.37□□□□□ -1.07
COL27A1-204ENST00000477421 LGALS1P09382 135 aaKnown RBP8.37□□□□□ -1.07
COL27A1-204ENST00000477421 FXYD2P54710 66 aa8.37□□□□□ -1.07
COL27A1-204ENST00000477421 SUMO4Q6EEV6 95 aa8.37□□□□□ -1.07
COL27A1-204ENST00000477421 ZNRF2Q8NHG8 242 aa8.37□□□□□ -1.07
COL27A1-204ENST00000477421 TRBV6-1A0A0K0K1D8 114 aa8.37□□□□□ -1.07
COL27A1-204ENST00000477421 SMAGPQ0VAQ4 97 aa8.37□□□□□ -1.07
COL27A1-204ENST00000477421 OCIAD2Q56VL3 154 aa8.37□□□□□ -1.07
COL27A1-204ENST00000477421 TRAV8-2A0A0B4J237 113 aa8.37□□□□□ -1.07
COL27A1-204ENST00000477421 MYMXA0A1B0GTQ4 84 aa8.37□□□□□ -1.07
COL27A1-204ENST00000477421 H3BRM9 83 aa8.37□□□□□ -1.07
COL27A1-204ENST00000477421 RPL36AP83881 106 aaKnown RBP8.37□□□□□ -1.07
COL27A1-204ENST00000477421 RPL36ALQ969Q0 106 aaKnown RBP8.37□□□□□ -1.07
COL27A1-204ENST00000477421 C20orf78Q9BR46 151 aa8.37□□□□□ -1.07
COL27A1-204ENST00000477421 ASPMQ8IZT6 3477 aa8.37□□□□□ -1.07
COL27A1-204ENST00000477421 EDN2P20800 178 aa8.36□□□□□ -1.07
COL27A1-204ENST00000477421 OPRPNQ99935 248 aaPredicted RBP8.36□□□□□ -1.07
COL27A1-204ENST00000477421 DEFB113Q30KQ7 82 aa8.36□□□□□ -1.07
COL27A1-204ENST00000477421 PRR9Q5T870 116 aa8.36□□□□□ -1.07
COL27A1-204ENST00000477421 TMEM61Q8N0U2 210 aa8.36□□□□□ -1.07
COL27A1-204ENST00000477421 GATD1Q8NB37 220 aa8.36□□□□□ -1.07
COL27A1-204ENST00000477421 J3QLI3 93 aa8.36□□□□□ -1.07
COL27A1-204ENST00000477421 TAX1BP3O14907 124 aa8.36□□□□□ -1.07
COL27A1-204ENST00000477421 GAGE7O76087 117 aa8.36□□□□□ -1.07
COL27A1-204ENST00000477421 GAGE12FP0CL80 117 aa8.36□□□□□ -1.07
COL27A1-204ENST00000477421 GAGE12GP0CL81 117 aa8.36□□□□□ -1.07
COL27A1-204ENST00000477421 GAGE12IP0CL82 117 aa8.36□□□□□ -1.07
COL27A1-204ENST00000477421 I3L3M4 83 aa8.35□□□□□ -1.07
COL27A1-204ENST00000477421 TIMM21Q9BVV7 248 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms