RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-231ENST00000477334 PPP1R1CQ8WVI7 109 aa1.22□□□□□ -2.21
RBM39-231ENST00000477334 TMEM141Q96I45 108 aa1.22□□□□□ -2.21
RBM39-231ENST00000477334 TCEAL7Q9BRU2 100 aa1.22□□□□□ -2.21
RBM39-231ENST00000477334 SERP1Q9Y6X1 66 aa1.22□□□□□ -2.21
RBM39-231ENST00000477334 SETXQ7Z333 2677 aaKnown RBP1.22□□□□□ -2.21
RBM39-231ENST00000477334 MCM3APO60318 1980 aa1.21□□□□□ -2.22
RBM39-231ENST00000477334 ZNF462Q96JM2 2506 aa1.21□□□□□ -2.22
RBM39-231ENST00000477334 CXorf51AA0A1B0GTR3 108 aa1.21□□□□□ -2.22
RBM39-231ENST00000477334 S100PP25815 95 aa1.21□□□□□ -2.22
RBM39-231ENST00000477334 GNG4P50150 75 aa1.21□□□□□ -2.22
RBM39-231ENST00000477334 TPPP2P59282 170 aa1.21□□□□□ -2.22
RBM39-231ENST00000477334 BTG2P78543 158 aa1.21□□□□□ -2.22
RBM39-231ENST00000477334 Q6ZS92 163 aa1.21□□□□□ -2.22
RBM39-231ENST00000477334 PP6455Q8WZ26 134 aa1.21□□□□□ -2.22
RBM39-231ENST00000477334 IFI27L1Q96BM0 104 aa1.21□□□□□ -2.22
RBM39-231ENST00000477334 AGPAT4-IT1Q9H0P7 198 aa1.21□□□□□ -2.22
RBM39-231ENST00000477334 CACNA1BQ00975 2339 aa1.21□□□□□ -2.22
RBM39-231ENST00000477334 SPEF2Q9C093 1822 aa1.2□□□□□ -2.22
RBM39-231ENST00000477334 PTPRMP28827 1452 aa1.2□□□□□ -2.22
RBM39-231ENST00000477334 ZNF518AQ6AHZ1 1483 aa1.2□□□□□ -2.22
RBM39-231ENST00000477334 EXPH5Q8NEV8 1989 aa1.2□□□□□ -2.22
RBM39-231ENST00000477334 TRAV12-3A0A0B4J271 114 aa1.2□□□□□ -2.22
RBM39-231ENST00000477334 TRBV30A0A0K0K1B3 111 aa1.2□□□□□ -2.22
RBM39-231ENST00000477334 LOC101927531A0A1B0GV80 90 aa1.2□□□□□ -2.22
RBM39-231ENST00000477334 MCRIP1C9JLW8 97 aa1.2□□□□□ -2.22
RBM39-231ENST00000477334 APOC4-APOC2K7ER74 178 aa1.2□□□□□ -2.22
RBM39-231ENST00000477334 APOC2P02655 101 aa1.2□□□□□ -2.22
RBM39-231ENST00000477334 CBLN1P23435 193 aa1.2□□□□□ -2.22
RBM39-231ENST00000477334 EFNA4P52798 201 aa1.2□□□□□ -2.22
RBM39-231ENST00000477334 CAV3P56539 151 aa1.2□□□□□ -2.22
RBM39-231ENST00000477334 Q56UQ5 140 aa1.2□□□□□ -2.22
RBM39-231ENST00000477334 Q6AWC8 147 aa1.2□□□□□ -2.22
RBM39-231ENST00000477334 COA4Q9NYJ1 87 aa1.2□□□□□ -2.22
RBM39-231ENST00000477334 VCANP13611 3396 aa1.2□□□□□ -2.22
RBM39-231ENST00000477334 FLG2Q5D862 2391 aaPredicted RBP1.2□□□□□ -2.22
RBM39-231ENST00000477334 SZT2Q5T011 3432 aa1.19□□□□□ -2.22
RBM39-231ENST00000477334 USP24Q9UPU5 2620 aa1.19□□□□□ -2.22
RBM39-231ENST00000477334 USP9XQ93008 2570 aaPredicted RBP1.19□□□□□ -2.22
RBM39-231ENST00000477334 MYOM2P54296 1465 aa1.19□□□□□ -2.22
RBM39-231ENST00000477334 RAPGEF6Q8TEU7 1601 aa1.19□□□□□ -2.22
RBM39-231ENST00000477334 UNC80Q8N2C7 3258 aa1.19□□□□□ -2.22
RBM39-231ENST00000477334 LOC100130705A0A1B0GUX0 176 aa1.19□□□□□ -2.22
RBM39-231ENST00000477334 CORTO00230 105 aa1.19□□□□□ -2.22
RBM39-231ENST00000477334 MAST4O15021 2626 aa1.19□□□□□ -2.22
RBM39-231ENST00000477334 BLMP54132 1417 aaPredicted RBP1.19□□□□□ -2.22
RBM39-231ENST00000477334 UBE2G1P62253 170 aa1.19□□□□□ -2.22
RBM39-231ENST00000477334 FXYD3Q14802 87 aa1.19□□□□□ -2.22
RBM39-231ENST00000477334 C9orf116Q5BN46 136 aaPredicted RBP1.19□□□□□ -2.22
RBM39-231ENST00000477334 MRPL54Q6P161 138 aaKnown RBP1.19□□□□□ -2.22
RBM39-231ENST00000477334 SPTSSBQ8NFR3 76 aa1.19□□□□□ -2.22
RBM39-231ENST00000477334 TSKUQ8WUA8 353 aa1.19□□□□□ -2.22
RBM39-231ENST00000477334 CCL19Q99731 98 aa1.19□□□□□ -2.22
RBM39-231ENST00000477334 SCN3BQ9NY72 215 aa1.19□□□□□ -2.22
RBM39-231ENST00000477334 CTTNBP2Q8WZ74 1663 aa1.19□□□□□ -2.22
RBM39-231ENST00000477334 PTPRDP23468 1912 aa1.19□□□□□ -2.22
RBM39-231ENST00000477334 EYSQ5T1H1 3165 aa1.18□□□□□ -2.22
RBM39-231ENST00000477334 A2ML1A8K2U0 1454 aa1.18□□□□□ -2.22
RBM39-231ENST00000477334 MED14O60244 1454 aa1.18□□□□□ -2.22
RBM39-231ENST00000477334 ANKRD11Q6UB99 2663 aaPredicted RBP1.18□□□□□ -2.22
RBM39-231ENST00000477334 TRBV10-3A0A0K0K1G6 114 aa1.18□□□□□ -2.22
RBM39-231ENST00000477334 SPAARA0A1B0GVQ0 90 aa1.18□□□□□ -2.22
RBM39-231ENST00000477334 NPC2P61916 151 aa1.18□□□□□ -2.22
RBM39-231ENST00000477334 PPP3R1P63098 170 aa1.18□□□□□ -2.22
RBM39-231ENST00000477334 CATR1Q13166 79 aa1.18□□□□□ -2.22
RBM39-231ENST00000477334 PPP3R2Q96LZ3 170 aa1.18□□□□□ -2.22
RBM39-231ENST00000477334 SPANXDQ9BXN6 97 aa1.18□□□□□ -2.22
RBM39-231ENST00000477334 MYH13Q9UKX3 1938 aa1.18□□□□□ -2.22
RBM39-231ENST00000477334 CASZ1Q86V15 1759 aa1.18□□□□□ -2.22
RBM39-231ENST00000477334 TRPM7Q96QT4 1865 aa1.18□□□□□ -2.22
RBM39-231ENST00000477334 KIF13AQ9H1H9 1805 aa1.17□□□□□ -2.22
RBM39-231ENST00000477334 ZFHX4Q86UP3 3567 aa1.17□□□□□ -2.22
RBM39-231ENST00000477334 RIMS1Q86UR5 1692 aaKnown RBP1.17□□□□□ -2.22
RBM39-231ENST00000477334 HMGXB3Q12766 1538 aa1.17□□□□□ -2.22
RBM39-231ENST00000477334 C20orf202A1L168 122 aa1.17□□□□□ -2.22
RBM39-231ENST00000477334 KRTAP10-4P60372 401 aaPredicted RBP1.17□□□□□ -2.22
RBM39-231ENST00000477334 C9orf153Q5TBE3 101 aa1.17□□□□□ -2.22
RBM39-231ENST00000477334 FAM74A4Q5TZK3 123 aa1.17□□□□□ -2.22
RBM39-231ENST00000477334 GTF2H5Q6ZYL4 71 aa1.17□□□□□ -2.22
RBM39-231ENST00000477334 DEFB132Q7Z7B7 95 aa1.17□□□□□ -2.22
RBM39-231ENST00000477334 C5orf56Q8N8D9 126 aa1.17□□□□□ -2.22
RBM39-231ENST00000477334 NESP48681 1621 aa1.17□□□□□ -2.22
RBM39-231ENST00000477334 TNRC6AQ8NDV7 1962 aaKnown RBP1.17□□□□□ -2.22
RBM39-231ENST00000477334 CFAP47Q6ZTR5 3102 aa1.17□□□□□ -2.22
RBM39-231ENST00000477334 COL6A6A6NMZ7 2263 aa1.17□□□□□ -2.22
RBM39-231ENST00000477334 CHD6Q8TD26 2715 aa1.17□□□□□ -2.22
RBM39-231ENST00000477334 RREB1Q92766 1687 aa1.16□□□□□ -2.22
RBM39-231ENST00000477334 GOLGB1Q14789 3259 aaKnown RBP1.16□□□□□ -2.22
RBM39-231ENST00000477334 MYO18AQ92614 2054 aaKnown RBP1.16□□□□□ -2.22
RBM39-231ENST00000477334 NHSL1Q5SYE7 1610 aa1.16□□□□□ -2.22
RBM39-231ENST00000477334 NBDYA0A0U1RRE5 68 aa1.16□□□□□ -2.22
RBM39-231ENST00000477334 TNFP01375 233 aa1.16□□□□□ -2.22
RBM39-231ENST00000477334 RBM3P98179 157 aaKnown RBP1.16□□□□□ -2.22
RBM39-231ENST00000477334 C4orf33Q8N1A6 199 aa1.16□□□□□ -2.22
RBM39-231ENST00000477334 SVBPQ8N300 66 aa1.16□□□□□ -2.22
RBM39-231ENST00000477334 C10orf82Q8WW14 230 aa1.16□□□□□ -2.22
RBM39-231ENST00000477334 LSM10Q969L4 123 aaKnown RBP1.16□□□□□ -2.22
RBM39-231ENST00000477334 C12orf57Q99622 126 aa1.16□□□□□ -2.22
RBM39-231ENST00000477334 BET1LQ9NYM9 111 aa1.16□□□□□ -2.22
RBM39-231ENST00000477334 FOCADQ5VW36 1801 aa1.16□□□□□ -2.22
RBM39-231ENST00000477334 MYH7P12883 1935 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms