RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 HMGB3O15347 200 aaKnown RBP10.46□□□□□ -0.73
APOBEC3F-203ENST00000476513 FLI1Q01543 452 aaPredicted RBP10.46□□□□□ -0.73
APOBEC3F-203ENST00000476513 FAM74A4Q5TZK3 123 aa10.46□□□□□ -0.73
APOBEC3F-203ENST00000476513 PRNTQ86SH4 94 aa10.46□□□□□ -0.73
APOBEC3F-203ENST00000476513 DPH3P1Q9H4G8 78 aa10.46□□□□□ -0.73
APOBEC3F-203ENST00000476513 IL36BQ9NZH7 164 aa10.46□□□□□ -0.73
APOBEC3F-203ENST00000476513 K7EQM0 130 aa10.45□□□□□ -0.74
APOBEC3F-203ENST00000476513 RAB2AP61019 212 aa10.45□□□□□ -0.74
APOBEC3F-203ENST00000476513 UBE2D3P61077 147 aa10.45□□□□□ -0.74
APOBEC3F-203ENST00000476513 UBE2D2P62837 147 aa10.45□□□□□ -0.74
APOBEC3F-203ENST00000476513 MPV17L2Q567V2 206 aa10.45□□□□□ -0.74
APOBEC3F-203ENST00000476513 SCGB1C1Q8TD33 95 aa10.45□□□□□ -0.74
APOBEC3F-203ENST00000476513 A0A087WWL8 130 aa10.44□□□□□ -0.74
APOBEC3F-203ENST00000476513 FAM240BA0A1B0GVZ2 78 aa10.44□□□□□ -0.74
APOBEC3F-203ENST00000476513 H3BVH4 76 aa10.44□□□□□ -0.74
APOBEC3F-203ENST00000476513 ANGP03950 147 aaKnown RBP10.44□□□□□ -0.74
APOBEC3F-203ENST00000476513 LINC01600Q96MT4 127 aa10.44□□□□□ -0.74
APOBEC3F-203ENST00000476513 MARVELD1Q9BSK0 173 aa10.44□□□□□ -0.74
APOBEC3F-203ENST00000476513 HSPB11Q9Y547 144 aa10.44□□□□□ -0.74
APOBEC3F-203ENST00000476513 TRBV6-8A0A0A6YYG3 113 aa10.43□□□□□ -0.74
APOBEC3F-203ENST00000476513 GAS8-AS1O95177 125 aa10.43□□□□□ -0.74
APOBEC3F-203ENST00000476513 ARL14EPLP0DKL9 152 aa10.43□□□□□ -0.74
APOBEC3F-203ENST00000476513 RPL36AP83881 106 aaKnown RBP10.43□□□□□ -0.74
APOBEC3F-203ENST00000476513 MIAQ16674 131 aa10.43□□□□□ -0.74
APOBEC3F-203ENST00000476513 SAPCD1Q5SSQ6 148 aa10.43□□□□□ -0.74
APOBEC3F-203ENST00000476513 KRTAP26-1Q6PEX3 210 aa10.43□□□□□ -0.74
APOBEC3F-203ENST00000476513 RPL36ALQ969Q0 106 aaKnown RBP10.43□□□□□ -0.74
APOBEC3F-203ENST00000476513 SMIM3Q9BZL3 60 aa10.43□□□□□ -0.74
APOBEC3F-203ENST00000476513 EPDR1Q9UM22 224 aa10.43□□□□□ -0.74
APOBEC3F-203ENST00000476513 TRBV7-3A0A075B6L6 115 aa10.42□□□□□ -0.74
APOBEC3F-203ENST00000476513 A0A087WYN8 130 aa10.42□□□□□ -0.74
APOBEC3F-203ENST00000476513 TRBV10-1A0A0K0K1A3 114 aa10.42□□□□□ -0.74
APOBEC3F-203ENST00000476513 DPH3Q96FX2 82 aa10.42□□□□□ -0.74
APOBEC3F-203ENST00000476513 SFRP2Q96HF1 295 aa10.42□□□□□ -0.74
APOBEC3F-203ENST00000476513 FABP5P3A8MUU1 101 aa10.41□□□□□ -0.74
APOBEC3F-203ENST00000476513 B4DEV8 164 aa10.41□□□□□ -0.74
APOBEC3F-203ENST00000476513 ARMS2P0C7Q2 107 aa10.41□□□□□ -0.74
APOBEC3F-203ENST00000476513 SUMO1P63165 101 aaKnown RBP10.41□□□□□ -0.74
APOBEC3F-203ENST00000476513 OR11H4Q8NGC9 324 aa10.41□□□□□ -0.74
APOBEC3F-203ENST00000476513 INMT-MINDY4F8WBC2 141 aa10.4□□□□□ -0.74
APOBEC3F-203ENST00000476513 CHTF8P0CG12 524 aa10.4□□□□□ -0.74
APOBEC3F-203ENST00000476513 CNBPP62633 177 aaKnown RBP10.4□□□□□ -0.74
APOBEC3F-203ENST00000476513 DNLZQ5SXM8 178 aa10.4□□□□□ -0.74
APOBEC3F-203ENST00000476513 SUN5Q8TC36 379 aa10.4□□□□□ -0.74
APOBEC3F-203ENST00000476513 RNF185Q96GF1 192 aa10.4□□□□□ -0.74
APOBEC3F-203ENST00000476513 WFDC1Q9HC57 220 aa10.4□□□□□ -0.74
APOBEC3F-203ENST00000476513 PHOX2AO14813 284 aa10.39□□□□□ -0.75
APOBEC3F-203ENST00000476513 CYCSP99999 105 aaKnown RBP10.39□□□□□ -0.75
APOBEC3F-203ENST00000476513 CLPSL2Q6UWE3 100 aa10.39□□□□□ -0.75
APOBEC3F-203ENST00000476513 CLRN3Q8NCR9 226 aa10.39□□□□□ -0.75
APOBEC3F-203ENST00000476513 OR10G8Q8NGN5 311 aa10.39□□□□□ -0.75
APOBEC3F-203ENST00000476513 CHCHD5Q9BSY4 110 aa10.39□□□□□ -0.75
APOBEC3F-203ENST00000476513 PRR34Q9NV39 138 aa10.39□□□□□ -0.75
APOBEC3F-203ENST00000476513 TRAV34A0A0B4J273 112 aa10.38□□□□□ -0.75
APOBEC3F-203ENST00000476513 GRIFINA4D1Z8 144 aa10.38□□□□□ -0.75
APOBEC3F-203ENST00000476513 KRBOX1C9JBD0 128 aa10.38□□□□□ -0.75
APOBEC3F-203ENST00000476513 STAG3L2P0CL84 134 aa10.38□□□□□ -0.75
APOBEC3F-203ENST00000476513 STAG3L3P0CL85 134 aa10.38□□□□□ -0.75
APOBEC3F-203ENST00000476513 GCHFRP30047 84 aa10.38□□□□□ -0.75
APOBEC3F-203ENST00000476513 SPACA4Q8TDM5 124 aa10.38□□□□□ -0.75
APOBEC3F-203ENST00000476513 PPP1R1CQ8WVI7 109 aa10.38□□□□□ -0.75
APOBEC3F-203ENST00000476513 PLAC8Q9NZF1 115 aa10.38□□□□□ -0.75
APOBEC3F-203ENST00000476513 ALG5Q9Y673 324 aa10.38□□□□□ -0.75
APOBEC3F-203ENST00000476513 KIF25-AS1Q9Y6Z4 181 aa10.38□□□□□ -0.75
APOBEC3F-203ENST00000476513 ARL2-SNX15V9GYD0 113 aa10.38□□□□□ -0.75
APOBEC3F-203ENST00000476513 IGHV3-64A0A075B6Q5 118 aa10.37□□□□□ -0.75
APOBEC3F-203ENST00000476513 M0R036 132 aa10.37□□□□□ -0.75
APOBEC3F-203ENST00000476513 M0R381 172 aa10.37□□□□□ -0.75
APOBEC3F-203ENST00000476513 RPL12P30050 165 aaKnown RBP10.37□□□□□ -0.75
APOBEC3F-203ENST00000476513 CDC34P49427 236 aaPredicted RBP10.37□□□□□ -0.75
APOBEC3F-203ENST00000476513 TCTE3Q8IZS6 198 aa10.37□□□□□ -0.75
APOBEC3F-203ENST00000476513 PHLDA3Q9Y5J5 127 aa10.37□□□□□ -0.75
APOBEC3F-203ENST00000476513 A0A0J9YXV3 536 aa10.36□□□□□ -0.75
APOBEC3F-203ENST00000476513 hDV102S1A0JD36 115 aa10.36□□□□□ -0.75
APOBEC3F-203ENST00000476513 CRIP1P50238 77 aa10.36□□□□□ -0.75
APOBEC3F-203ENST00000476513 H2BFSP57053 126 aa10.36□□□□□ -0.75
APOBEC3F-203ENST00000476513 KRTAP10-8P60410 259 aa10.36□□□□□ -0.75
APOBEC3F-203ENST00000476513 PKIAP61925 76 aa10.36□□□□□ -0.75
APOBEC3F-203ENST00000476513 LINC00269Q8N2A0 174 aa10.36□□□□□ -0.75
APOBEC3F-203ENST00000476513 NEXN-AS1Q8NBZ9 246 aa10.36□□□□□ -0.75
APOBEC3F-203ENST00000476513 C7orf33Q8WU49 177 aa10.36□□□□□ -0.75
APOBEC3F-203ENST00000476513 RAB24Q969Q5 203 aa10.36□□□□□ -0.75
APOBEC3F-203ENST00000476513 MPC2O95563 127 aa10.35□□□□□ -0.75
APOBEC3F-203ENST00000476513 SLPIP03973 132 aa10.35□□□□□ -0.75
APOBEC3F-203ENST00000476513 TPT1P13693 172 aaKnown RBP10.35□□□□□ -0.75
APOBEC3F-203ENST00000476513 RBX1P62877 108 aa10.35□□□□□ -0.75
APOBEC3F-203ENST00000476513 WDR73Q6P4I2 378 aa10.35□□□□□ -0.75
APOBEC3F-203ENST00000476513 SH2D1AO60880 128 aa10.34□□□□□ -0.75
APOBEC3F-203ENST00000476513 NTM-AS1Q6ZSK4 140 aa10.34□□□□□ -0.75
APOBEC3F-203ENST00000476513 ZFP82Q8N141 532 aa10.34□□□□□ -0.75
APOBEC3F-203ENST00000476513 PRR3P79522 188 aaKnown RBP10.33□□□□□ -0.76
APOBEC3F-203ENST00000476513 PRR27Q6MZM9 219 aa10.33□□□□□ -0.76
APOBEC3F-203ENST00000476513 Q86TA4 180 aa10.33□□□□□ -0.76
APOBEC3F-203ENST00000476513 TMEM167BQ9NRX6 74 aa10.33□□□□□ -0.76
APOBEC3F-203ENST00000476513 IGLV10-54A0A075B6I4 117 aa10.32□□□□□ -0.76
APOBEC3F-203ENST00000476513 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.32□□□□□ -0.76
APOBEC3F-203ENST00000476513 PET100P0DJ07 73 aa10.32□□□□□ -0.76
APOBEC3F-203ENST00000476513 RAB4BP61018 213 aa10.32□□□□□ -0.76
APOBEC3F-203ENST00000476513 GAGE6Q13070 117 aa10.32□□□□□ -0.76
APOBEC3F-203ENST00000476513 AP5S1Q9NUS5 200 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms