RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 A0A0A6YYH2 397 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 IGLC7A0M8Q6 106 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 TMEM213A2RRL7 107 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 A6NJ64 397 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 PGLYRP1O75594 196 aaPredicted RBP1.78□□□□□ -2.12
PTCD3-211ENST00000476215 ATP6V1G2O95670 118 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 PPYP01298 95 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 REG1AP05451 166 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 TRAPPC2P0DI81 140 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 TRAPPC2BP0DI82 140 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 OR13C7P0DN81 318 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 DEFA4P12838 97 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 CD36P16671 472 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 ARPC4P59998 168 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 WT1-ASQ06250 92 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 ZNF818PQ6ZRF7 136 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 OR1L8Q8NGR8 309 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 DYNC2LI1Q8TCX1 351 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 DYNLRB2Q8TF09 96 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 COMMD5Q9GZQ3 224 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 Q9H521 79 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 HRASLSQ9HDD0 168 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 NDUFA4L2Q9NRX3 87 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 BET1LQ9NYM9 111 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 MRPL27Q9P0M9 148 aaKnown RBP1.78□□□□□ -2.12
PTCD3-211ENST00000476215 UFC1Q9Y3C8 167 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 ALG5Q9Y673 324 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 DNAH11Q96DT5 4516 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 OR2T8A6NH00 312 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 H3BRN7 92 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 NDUFA4O00483 81 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 CYB5BO43169 146 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 TGOLN2O43493 480 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 SNAPC5O75971 98 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 PMP2P02689 132 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 FXYD4P59646 89 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 HSPE1P61604 102 aaKnown RBP1.77□□□□□ -2.13
PTCD3-211ENST00000476215 CATR1Q13166 79 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 NEDD8Q15843 81 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 AADACL3Q5VUY0 350 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 LPCAT3Q6P1A2 487 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 RASL11AQ6T310 242 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 GDPD1Q8N9F7 314 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 TMEM75Q8N9X5 138 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 OR51H1Q8NH63 302 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 BORCS5Q969J3 196 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 DGCR14Q96DF8 476 aaKnown RBP1.77□□□□□ -2.13
PTCD3-211ENST00000476215 UPK3BQ9BT76 320 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 WFDC10AQ9H1F0 79 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 TREM1Q9NP99 234 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 TMEM14BQ9NUH8 114 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 FKBP11Q9NYL4 201 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 SMPXQ9UHP9 88 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 PRNDQ9UKY0 176 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 ANAPC10Q9UM13 185 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 DNAH6Q9C0G6 4158 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 HERC2O95714 4834 aa1.77□□□□□ -2.13
PTCD3-211ENST00000476215 DNAH5Q8TE73 4624 aa1.76□□□□□ -2.13
PTCD3-211ENST00000476215 A0A087WXM4 84 aa1.76□□□□□ -2.13
PTCD3-211ENST00000476215 TRAV14DV4A0A0A6YYC5 116 aa1.76□□□□□ -2.13
PTCD3-211ENST00000476215 IGHV3-73A0A0B4J1V6 119 aa1.76□□□□□ -2.13
PTCD3-211ENST00000476215 SMIM31A0A1B0GVY4 71 aa1.76□□□□□ -2.13
PTCD3-211ENST00000476215 LINC00862A6NCI5 91 aa1.76□□□□□ -2.13
PTCD3-211ENST00000476215 C19orf71A6NCJ1 209 aa1.76□□□□□ -2.13
PTCD3-211ENST00000476215 MEIS3P1A6NDR6 274 aa1.76□□□□□ -2.13
PTCD3-211ENST00000476215 OR4C46A6NHA9 309 aa1.76□□□□□ -2.13
PTCD3-211ENST00000476215 I3L2K1 104 aa1.76□□□□□ -2.13
PTCD3-211ENST00000476215 K7EIM0 57 aa1.76□□□□□ -2.13
PTCD3-211ENST00000476215 GPR31O00270 319 aa1.76□□□□□ -2.13
PTCD3-211ENST00000476215 CTSDP07339 412 aaPredicted RBP1.76□□□□□ -2.13
PTCD3-211ENST00000476215 PVALBP20472 110 aaPredicted RBP1.76□□□□□ -2.13
PTCD3-211ENST00000476215 G6PCP35575 357 aa1.76□□□□□ -2.13
PTCD3-211ENST00000476215 ETV6P41212 452 aa1.76□□□□□ -2.13
PTCD3-211ENST00000476215 TAS2R20P59543 309 aa1.76□□□□□ -2.13
PTCD3-211ENST00000476215 LSM3P62310 102 aaKnown RBP1.76□□□□□ -2.13
PTCD3-211ENST00000476215 ERHP84090 104 aaKnown RBP1.76□□□□□ -2.13
PTCD3-211ENST00000476215 Q56UQ5 140 aa1.76□□□□□ -2.13
PTCD3-211ENST00000476215 TERB2Q8NHR7 220 aa1.76□□□□□ -2.13
PTCD3-211ENST00000476215 LSM10Q969L4 123 aaKnown RBP1.76□□□□□ -2.13
PTCD3-211ENST00000476215 TSC22D3Q99576 134 aa1.76□□□□□ -2.13
PTCD3-211ENST00000476215 RHPN1-AS1Q9BWJ2 59 aa1.76□□□□□ -2.13
PTCD3-211ENST00000476215 COMMD3Q9UBI1 195 aa1.76□□□□□ -2.13
PTCD3-211ENST00000476215 TP53TG1Q9Y2A0 90 aa1.76□□□□□ -2.13
PTCD3-211ENST00000476215 MRPS16Q9Y3D3 137 aaKnown RBP1.76□□□□□ -2.13
PTCD3-211ENST00000476215 DYNC1H1Q14204 4646 aaKnown RBP1.76□□□□□ -2.13
PTCD3-211ENST00000476215 MUC21A0A0G2JKD1 596 aa1.75□□□□□ -2.13
PTCD3-211ENST00000476215 MUC21A0A140T8X8 626 aa1.75□□□□□ -2.13
PTCD3-211ENST00000476215 HPGDSO60760 199 aa1.75□□□□□ -2.13
PTCD3-211ENST00000476215 LY6G6CO95867 125 aa1.75□□□□□ -2.13
PTCD3-211ENST00000476215 MT-CO2P00403 227 aa1.75□□□□□ -2.13
PTCD3-211ENST00000476215 IGKV1-5P01602 117 aa1.75□□□□□ -2.13
PTCD3-211ENST00000476215 CD3DP04234 171 aa1.75□□□□□ -2.13
PTCD3-211ENST00000476215 ESDP10768 282 aa1.75□□□□□ -2.13
PTCD3-211ENST00000476215 S100GP29377 79 aa1.75□□□□□ -2.13
PTCD3-211ENST00000476215 SNCAP37840 140 aa1.75□□□□□ -2.13
PTCD3-211ENST00000476215 RPL5P46777 297 aaKnown RBP1.75□□□□□ -2.13
PTCD3-211ENST00000476215 VBP1P61758 197 aa1.75□□□□□ -2.13
PTCD3-211ENST00000476215 NCS1P62166 190 aa1.75□□□□□ -2.13
PTCD3-211ENST00000476215 PRCDQ00LT1 54 aa1.75□□□□□ -2.13
PTCD3-211ENST00000476215 DEFB135Q30KP9 77 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms